RNA–Protein interactions for RNA: ENST00000428767.1

ALMS1P1-201, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

BASIC

Gene ALMS1P1, Length 921 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-201ENST00000428767 TANC1Q9C0D5 1861 aa14.04□□□□□ -0.16
ALMS1P1-201ENST00000428767 DNAJC25-GNG10A0A024R161 153 aa14.04□□□□□ -0.16
ALMS1P1-201ENST00000428767 ARHGEF15O94989 841 aa14.04□□□□□ -0.16
ALMS1P1-201ENST00000428767 EEF2P13639 858 aaKnown RBP14.04□□□□□ -0.16
ALMS1P1-201ENST00000428767 PTGS1P23219 599 aa14.04□□□□□ -0.16
ALMS1P1-201ENST00000428767 NOL8Q76FK4 1167 aaKnown RBP14.04□□□□□ -0.16
ALMS1P1-201ENST00000428767 SNX27Q96L92 541 aa14.04□□□□□ -0.16
ALMS1P1-201ENST00000428767 ABHD16BQ9H3Z7 469 aa14.04□□□□□ -0.16
ALMS1P1-201ENST00000428767 SWAP70Q9UH65 585 aa14.04□□□□□ -0.16
ALMS1P1-201ENST00000428767 TET1Q8NFU7 2136 aa14.03□□□□□ -0.16
ALMS1P1-201ENST00000428767 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.03□□□□□ -0.16
ALMS1P1-201ENST00000428767 PI4K2BG5E9Z4 385 aa14.03□□□□□ -0.16
ALMS1P1-201ENST00000428767 B4GALT4O60513 344 aa14.03□□□□□ -0.16
ALMS1P1-201ENST00000428767 SURF6O75683 361 aaKnown RBP14.03□□□□□ -0.16
ALMS1P1-201ENST00000428767 POU3F3P20264 500 aaPredicted RBP14.03□□□□□ -0.16
ALMS1P1-201ENST00000428767 ITGA7Q13683 1181 aa14.03□□□□□ -0.16
ALMS1P1-201ENST00000428767 ARMCX2Q7L311 632 aa14.03□□□□□ -0.16
ALMS1P1-201ENST00000428767 DEFB128Q7Z7B8 93 aa14.03□□□□□ -0.16
ALMS1P1-201ENST00000428767 RPUSD2Q8IZ73 545 aaKnown RBP14.03□□□□□ -0.16
ALMS1P1-201ENST00000428767 LCORLQ8N3X6 602 aa14.03□□□□□ -0.16
ALMS1P1-201ENST00000428767 VWCEQ96DN2 955 aa14.03□□□□□ -0.16
ALMS1P1-201ENST00000428767 FGD4Q96M96 766 aa14.03□□□□□ -0.16
ALMS1P1-201ENST00000428767 NUP88Q99567 741 aaPredicted RBP14.03□□□□□ -0.16
ALMS1P1-201ENST00000428767 TEX13BQ9BXU2 312 aa14.03□□□□□ -0.16
ALMS1P1-201ENST00000428767 GOPCQ9HD26 462 aa14.03□□□□□ -0.16
ALMS1P1-201ENST00000428767 DCP1AQ9NPI6 582 aaPredicted RBP14.03□□□□□ -0.16
ALMS1P1-201ENST00000428767 ASTN1O14525 1302 aa14.03□□□□□ -0.16
ALMS1P1-201ENST00000428767 GREB1LQ9C091 1923 aaPredicted RBP14.02□□□□□ -0.16
ALMS1P1-201ENST00000428767 GRIN2DO15399 1336 aa14.02□□□□□ -0.17
ALMS1P1-201ENST00000428767 CYP2D7A0A087X1C5 515 aa14.02□□□□□ -0.17
ALMS1P1-201ENST00000428767 PSMC6P62333 389 aa14.02□□□□□ -0.17
ALMS1P1-201ENST00000428767 SPRED2Q7Z698 418 aa14.02□□□□□ -0.17
ALMS1P1-201ENST00000428767 ZNF467Q7Z7K2 595 aaPredicted RBP14.02□□□□□ -0.17
ALMS1P1-201ENST00000428767 CPXCR1Q8N123 301 aa14.02□□□□□ -0.17
ALMS1P1-201ENST00000428767 SLC43A3Q8NBI5 491 aa14.02□□□□□ -0.17
ALMS1P1-201ENST00000428767 EAF2Q96CJ1 260 aaPredicted RBP14.02□□□□□ -0.17
ALMS1P1-201ENST00000428767 PRR33A8MZF0 331 aa14.01□□□□□ -0.17
ALMS1P1-201ENST00000428767 BCAR3O75815 825 aa14.01□□□□□ -0.17
ALMS1P1-201ENST00000428767 PDE6AP16499 860 aa14.01□□□□□ -0.17
ALMS1P1-201ENST00000428767 TAP1Q03518 808 aa14.01□□□□□ -0.17
ALMS1P1-201ENST00000428767 GRB10Q13322 594 aa14.01□□□□□ -0.17
ALMS1P1-201ENST00000428767 POLA2Q14181 598 aa14.01□□□□□ -0.17
ALMS1P1-201ENST00000428767 TLK2Q86UE8 772 aa14.01□□□□□ -0.17
ALMS1P1-201ENST00000428767 CCDC144CPQ8IYA2 1237 aa14.01□□□□□ -0.17
ALMS1P1-201ENST00000428767 ANKRD35Q8N283 1001 aa14.01□□□□□ -0.17
ALMS1P1-201ENST00000428767 AGBL1Q96MI9 1066 aa14.01□□□□□ -0.17
ALMS1P1-201ENST00000428767 SLF1Q9BQI6 1058 aa14.01□□□□□ -0.17
ALMS1P1-201ENST00000428767 TRIP12Q14669 1992 aaPredicted RBP14.01□□□□□ -0.17
ALMS1P1-201ENST00000428767 MYH7P12883 1935 aa14.01□□□□□ -0.17
ALMS1P1-201ENST00000428767 ZNF532Q9HCE3 1301 aa14□□□□□ -0.17
ALMS1P1-201ENST00000428767 PRKAB2O43741 272 aa14□□□□□ -0.17
ALMS1P1-201ENST00000428767 CDK8P49336 464 aa14□□□□□ -0.17
ALMS1P1-201ENST00000428767 RARSP54136 660 aaKnown RBP14□□□□□ -0.17
ALMS1P1-201ENST00000428767 TNFAIP2Q03169 654 aa14□□□□□ -0.17
ALMS1P1-201ENST00000428767 FSCN1Q16658 493 aaKnown RBP14□□□□□ -0.17
ALMS1P1-201ENST00000428767 SLC9C2Q5TAH2 1124 aa14□□□□□ -0.17
ALMS1P1-201ENST00000428767 CLUAP1Q96AJ1 413 aa14□□□□□ -0.17
ALMS1P1-201ENST00000428767 KATNBL1Q9H079 304 aa14□□□□□ -0.17
ALMS1P1-201ENST00000428767 C1orf115Q9H7X2 142 aa14□□□□□ -0.17
ALMS1P1-201ENST00000428767 ARMT1Q9H993 441 aa14□□□□□ -0.17
ALMS1P1-201ENST00000428767 RAVER2Q9HCJ3 691 aaKnown RBP14□□□□□ -0.17
ALMS1P1-201ENST00000428767 CTDP1Q9Y5B0 961 aaPredicted RBP14□□□□□ -0.17
ALMS1P1-201ENST00000428767 TRIOO75962 3097 aa14□□□□□ -0.17
ALMS1P1-201ENST00000428767 LCTP09848 1927 aa14□□□□□ -0.17
ALMS1P1-201ENST00000428767 CT47B1P0C2W7 299 aaPredicted RBP13.99□□□□□ -0.17
ALMS1P1-201ENST00000428767 CYP2C9P11712 490 aa13.99□□□□□ -0.17
ALMS1P1-201ENST00000428767 SSTR3P32745 418 aaPredicted RBP13.99□□□□□ -0.17
ALMS1P1-201ENST00000428767 NHLH1Q02575 133 aa13.99□□□□□ -0.17
ALMS1P1-201ENST00000428767 SSH3Q8TE77 659 aa13.99□□□□□ -0.17
ALMS1P1-201ENST00000428767 GDPD5Q8WTR4 605 aa13.99□□□□□ -0.17
ALMS1P1-201ENST00000428767 CCDC17Q96LX7 622 aa13.99□□□□□ -0.17
ALMS1P1-201ENST00000428767 HOMER2Q9NSB8 354 aa13.99□□□□□ -0.17
ALMS1P1-201ENST00000428767 DDX49Q9Y6V7 483 aaKnown RBP13.99□□□□□ -0.17
ALMS1P1-201ENST00000428767 C5orf42Q9H799 3197 aa13.99□□□□□ -0.17
ALMS1P1-201ENST00000428767 SIP14410 1827 aa13.99□□□□□ -0.17
ALMS1P1-201ENST00000428767 ZNF318Q5VUA4 2279 aa13.98□□□□□ -0.17
ALMS1P1-201ENST00000428767 DYNC1LI2O43237 492 aaPredicted RBP13.98□□□□□ -0.17
ALMS1P1-201ENST00000428767 CABYRO75952 493 aa13.98□□□□□ -0.17
ALMS1P1-201ENST00000428767 TRIM27P14373 513 aa13.98□□□□□ -0.17
ALMS1P1-201ENST00000428767 CNTN2Q02246 1040 aa13.98□□□□□ -0.17
ALMS1P1-201ENST00000428767 CSPP1Q1MSJ5 1256 aa13.98□□□□□ -0.17
ALMS1P1-201ENST00000428767 ARHGAP45Q92619 1136 aa13.98□□□□□ -0.17
ALMS1P1-201ENST00000428767 SLC9A7Q96T83 725 aa13.98□□□□□ -0.17
ALMS1P1-201ENST00000428767 AP5M1Q9H0R1 490 aa13.98□□□□□ -0.17
ALMS1P1-201ENST00000428767 KANSL2Q9H9L4 492 aa13.98□□□□□ -0.17
ALMS1P1-201ENST00000428767 TRMT13Q9NUP7 481 aaKnown RBP13.98□□□□□ -0.17
ALMS1P1-201ENST00000428767 USP34Q70CQ2 3546 aa13.98□□□□□ -0.17
ALMS1P1-201ENST00000428767 LPXNO60711 386 aa13.97□□□□□ -0.17
ALMS1P1-201ENST00000428767 ZBED4O75132 1171 aa13.97□□□□□ -0.17
ALMS1P1-201ENST00000428767 MBD4O95243 580 aa13.97□□□□□ -0.17
ALMS1P1-201ENST00000428767 PFKMP08237 780 aa13.97□□□□□ -0.17
ALMS1P1-201ENST00000428767 ACTN1P12814 892 aa13.97□□□□□ -0.17
ALMS1P1-201ENST00000428767 NKX3-2P78367 333 aa13.97□□□□□ -0.17
ALMS1P1-201ENST00000428767 ATP8B2P98198 1209 aa13.97□□□□□ -0.17
ALMS1P1-201ENST00000428767 SLFNL1Q499Z3 407 aa13.97□□□□□ -0.17
ALMS1P1-201ENST00000428767 TMED8Q6PL24 325 aaPredicted RBP13.97□□□□□ -0.17
ALMS1P1-201ENST00000428767 C16orf86Q6ZW13 317 aa13.97□□□□□ -0.17
ALMS1P1-201ENST00000428767 AACSQ86V21 672 aa13.97□□□□□ -0.17
ALMS1P1-201ENST00000428767 TRMT2AQ8IZ69 625 aaKnown RBP13.97□□□□□ -0.17
ALMS1P1-201ENST00000428767 GJD3Q8N144 294 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms