RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 ATP5JP18859 108 aa10.3□□□□□ -0.76
HDAC1-202ENST00000428704 CAP2P40123 477 aa10.3□□□□□ -0.76
HDAC1-202ENST00000428704 BACE1P56817 501 aa10.3□□□□□ -0.76
HDAC1-202ENST00000428704 PPIGQ13427 754 aaKnown RBP eCLIP10.3□□□□□ -0.766e-8■■■□□ 17.4
HDAC1-202ENST00000428704 RABEP1Q15276 862 aa10.3□□□□□ -0.76
HDAC1-202ENST00000428704 CSPP1Q1MSJ5 1256 aa10.3□□□□□ -0.76
HDAC1-202ENST00000428704 TMEM240Q5SV17 173 aa10.3□□□□□ -0.76
HDAC1-202ENST00000428704 C6orf132Q5T0Z8 1188 aa10.3□□□□□ -0.76
HDAC1-202ENST00000428704 MAPKAPK5Q8IW41 473 aa10.3□□□□□ -0.76
HDAC1-202ENST00000428704 HSCBQ8IWL3 235 aa10.3□□□□□ -0.76
HDAC1-202ENST00000428704 NPLOC4Q8TAT6 608 aa10.3□□□□□ -0.76
HDAC1-202ENST00000428704 TGFBRAP1Q8WUH2 860 aa10.3□□□□□ -0.76
HDAC1-202ENST00000428704 DNAJC2Q99543 621 aaKnown RBP10.3□□□□□ -0.76
HDAC1-202ENST00000428704 RIOK1Q9BRS2 568 aaKnown RBP10.3□□□□□ -0.76
HDAC1-202ENST00000428704 NOL10Q9BSC4 688 aaKnown RBP10.3□□□□□ -0.76
HDAC1-202ENST00000428704 MYH8P13535 1937 aa10.3□□□□□ -0.76
HDAC1-202ENST00000428704 FRMPD3Q5JV73 1810 aa10.3□□□□□ -0.76
HDAC1-202ENST00000428704 DCDC2CA8MYV0 355 aa10.29□□□□□ -0.76
HDAC1-202ENST00000428704 CHGBP05060 677 aa10.29□□□□□ -0.76
HDAC1-202ENST00000428704 DDIT3P35638 169 aa10.29□□□□□ -0.76
HDAC1-202ENST00000428704 FOXK2Q01167 660 aa10.29□□□□□ -0.76
HDAC1-202ENST00000428704 TTF1Q15361 905 aaPredicted RBP10.29□□□□□ -0.76
HDAC1-202ENST00000428704 SLFNL1Q499Z3 407 aa10.29□□□□□ -0.76
HDAC1-202ENST00000428704 FAM47AQ5JRC9 791 aa10.29□□□□□ -0.76
HDAC1-202ENST00000428704 RASIP1Q5U651 963 aa10.29□□□□□ -0.76
HDAC1-202ENST00000428704 TMED8Q6PL24 325 aaPredicted RBP10.29□□□□□ -0.76
HDAC1-202ENST00000428704 METTL16Q86W50 562 aaKnown RBP10.29□□□□□ -0.76
HDAC1-202ENST00000428704 PI4K2BQ8TCG2 481 aa10.29□□□□□ -0.76
HDAC1-202ENST00000428704 FBXL18Q96ME1 805 aa10.29□□□□□ -0.76
HDAC1-202ENST00000428704 HAUS7Q99871 368 aa10.29□□□□□ -0.76
HDAC1-202ENST00000428704 WDR18Q9BV38 432 aa10.29□□□□□ -0.76
HDAC1-202ENST00000428704 BOLA2Q9H3K6 86 aa10.29□□□□□ -0.76
HDAC1-202ENST00000428704 PAG1Q9NWQ8 432 aa10.29□□□□□ -0.76
HDAC1-202ENST00000428704 CHMP5Q9NZZ3 219 aa10.29□□□□□ -0.76
HDAC1-202ENST00000428704 PHF24Q9UPV7 400 aa10.29□□□□□ -0.76
HDAC1-202ENST00000428704 ZNF532Q9HCE3 1301 aa10.29□□□□□ -0.76
HDAC1-202ENST00000428704 C19orf81C9J6K1 198 aa10.28□□□□□ -0.76
HDAC1-202ENST00000428704 TIMP1P01033 207 aa10.28□□□□□ -0.76
HDAC1-202ENST00000428704 CHMLP26374 656 aa10.28□□□□□ -0.76
HDAC1-202ENST00000428704 ANAPC15P60006 121 aa10.28□□□□□ -0.76
HDAC1-202ENST00000428704 JAG1P78504 1218 aa10.28□□□□□ -0.76
HDAC1-202ENST00000428704 FAAP100Q0VG06 881 aa10.28□□□□□ -0.76
HDAC1-202ENST00000428704 GRB14Q14449 540 aa10.28□□□□□ -0.76
HDAC1-202ENST00000428704 SHROOM1Q2M3G4 852 aaPredicted RBP10.28□□□□□ -0.76
HDAC1-202ENST00000428704 SLC9C2Q5TAH2 1124 aa10.28□□□□□ -0.76
HDAC1-202ENST00000428704 TSHZ3Q63HK5 1081 aa10.28□□□□□ -0.76
HDAC1-202ENST00000428704 PPP2R2DQ66LE6 453 aa10.28□□□□□ -0.76
HDAC1-202ENST00000428704 MFSD5Q6N075 450 aa10.28□□□□□ -0.76
HDAC1-202ENST00000428704 PSRC1Q6PGN9 363 aaPredicted RBP10.28□□□□□ -0.76
HDAC1-202ENST00000428704 DPP9Q86TI2 863 aa10.28□□□□□ -0.76
HDAC1-202ENST00000428704 KCNH6Q9H252 994 aa10.28□□□□□ -0.76
HDAC1-202ENST00000428704 MTIF3Q9H2K0 278 aaKnown RBP10.28□□□□□ -0.76
HDAC1-202ENST00000428704 DHX36Q9H2U1 1008 aaKnown RBP10.28□□□□□ -0.76
HDAC1-202ENST00000428704 SAP30BPQ9UHR5 308 aaKnown RBP10.28□□□□□ -0.76
HDAC1-202ENST00000428704 HERC5Q9UII4 1024 aaKnown RBP10.28□□□□□ -0.76
HDAC1-202ENST00000428704 PALD1Q9ULE6 856 aa10.28□□□□□ -0.76
HDAC1-202ENST00000428704 RABGAP1Q9Y3P9 1069 aa10.28□□□□□ -0.76
HDAC1-202ENST00000428704 RLFQ13129 1914 aa10.28□□□□□ -0.76
HDAC1-202ENST00000428704 USP17L10C9JJH3 530 aa10.27□□□□□ -0.77
HDAC1-202ENST00000428704 ACRP10323 421 aa10.27□□□□□ -0.77
HDAC1-202ENST00000428704 ADD2P35612 726 aa10.27□□□□□ -0.77
HDAC1-202ENST00000428704 TSR1Q2NL82 804 aaKnown RBP10.27□□□□□ -0.77
HDAC1-202ENST00000428704 OLFML2BQ68BL8 750 aa10.27□□□□□ -0.77
HDAC1-202ENST00000428704 ZNF365Q70YC5 407 aa10.27□□□□□ -0.77
HDAC1-202ENST00000428704 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.27□□□□□ -0.77
HDAC1-202ENST00000428704 C16orf59Q7L2K0 433 aa10.27□□□□□ -0.77
HDAC1-202ENST00000428704 RNF180Q86T96 592 aa10.27□□□□□ -0.77
HDAC1-202ENST00000428704 CERS3Q8IU89 383 aa10.27□□□□□ -0.77
HDAC1-202ENST00000428704 LCORLQ8N3X6 602 aa10.27□□□□□ -0.77
HDAC1-202ENST00000428704 TMEM199Q8N511 208 aa10.27□□□□□ -0.77
HDAC1-202ENST00000428704 HLA-CQ95604 372 aa10.27□□□□□ -0.77
HDAC1-202ENST00000428704 KCNK17Q96T54 332 aa10.27□□□□□ -0.77
HDAC1-202ENST00000428704 ESYT1Q9BSJ8 1104 aa10.27□□□□□ -0.77
HDAC1-202ENST00000428704 XPNPEP3Q9NQH7 507 aa10.27□□□□□ -0.77
HDAC1-202ENST00000428704 ECHDC1Q9NTX5 307 aa10.27□□□□□ -0.77
HDAC1-202ENST00000428704 PI4KBQ9UBF8 816 aa10.27□□□□□ -0.77
HDAC1-202ENST00000428704 YBX2Q9Y2T7 364 aaKnown RBP10.27□□□□□ -0.77
HDAC1-202ENST00000428704 CHD7Q9P2D1 2997 aa10.26□□□□□ -0.77
HDAC1-202ENST00000428704 MAGEB6P1A0A0J9YX57 407 aa10.26□□□□□ -0.77
HDAC1-202ENST00000428704 A0A1W2PQ45 241 aaPredicted RBP10.26□□□□□ -0.77
HDAC1-202ENST00000428704 A0A1W2PQY0 241 aa10.26□□□□□ -0.77
HDAC1-202ENST00000428704 K7ELQ4 463 aaPredicted RBP10.26□□□□□ -0.77
HDAC1-202ENST00000428704 CNMDO75829 334 aa10.26□□□□□ -0.77
HDAC1-202ENST00000428704 ASNSP08243 561 aa10.26□□□□□ -0.77
HDAC1-202ENST00000428704 RARBP10826 455 aa10.26□□□□□ -0.77
HDAC1-202ENST00000428704 CSF2RAP15509 400 aa10.26□□□□□ -0.77
HDAC1-202ENST00000428704 PSEN2P49810 448 aa10.26□□□□□ -0.77
HDAC1-202ENST00000428704 ANKRD33Q7Z3H0 272 aa10.26□□□□□ -0.77
HDAC1-202ENST00000428704 TOX2Q96NM4 488 aa10.26□□□□□ -0.77
HDAC1-202ENST00000428704 CD320Q9NPF0 282 aa10.26□□□□□ -0.77
HDAC1-202ENST00000428704 MTCH2Q9Y6C9 303 aa10.26□□□□□ -0.77
HDAC1-202ENST00000428704 GREB1LQ9C091 1923 aaPredicted RBP10.25□□□□□ -0.77
HDAC1-202ENST00000428704 IGHA2P01877 340 aa10.25□□□□□ -0.77
HDAC1-202ENST00000428704 ADORA2AP29274 412 aa10.25□□□□□ -0.77
HDAC1-202ENST00000428704 USP5P45974 858 aa10.25□□□□□ -0.77
HDAC1-202ENST00000428704 PRAMEF19Q5SWL8 479 aa10.25□□□□□ -0.77
HDAC1-202ENST00000428704 TICAM2Q86XR7 235 aa10.25□□□□□ -0.77
HDAC1-202ENST00000428704 SDR42E1Q8WUS8 393 aa10.25□□□□□ -0.77
HDAC1-202ENST00000428704 GPATCH3Q96I76 525 aa10.25□□□□□ -0.77
HDAC1-202ENST00000428704 EHD4Q9H223 541 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms