RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 TOP1P11387 765 aaKnown RBP18.25■□□□□ 0.51
CTDSP1-202ENST00000428361 NOVP48745 357 aa18.25■□□□□ 0.51
CTDSP1-202ENST00000428361 MDM2Q00987 491 aaPredicted RBP18.25■□□□□ 0.51
CTDSP1-202ENST00000428361 CCDC96Q2M329 555 aa18.25■□□□□ 0.51
CTDSP1-202ENST00000428361 B4GALNT3Q6L9W6 998 aa18.25■□□□□ 0.51
CTDSP1-202ENST00000428361 FAM227BQ96M60 508 aa18.25■□□□□ 0.51
CTDSP1-202ENST00000428361 TCP11L1Q9NUJ3 509 aa18.25■□□□□ 0.51
CTDSP1-202ENST00000428361 ASB14A6NK59 587 aa18.24■□□□□ 0.51
CTDSP1-202ENST00000428361 DUSP11O75319 330 aaKnown RBP18.24■□□□□ 0.51
CTDSP1-202ENST00000428361 NUCB1Q02818 461 aa18.24■□□□□ 0.51
CTDSP1-202ENST00000428361 NMIQ13287 307 aaPredicted RBP18.24■□□□□ 0.51
CTDSP1-202ENST00000428361 ACVR2BQ13705 512 aa18.24■□□□□ 0.51
CTDSP1-202ENST00000428361 RRP12Q5JTH9 1297 aaKnown RBP18.24■□□□□ 0.51
CTDSP1-202ENST00000428361 MFSD6Q6ZSS7 791 aa18.24■□□□□ 0.51
CTDSP1-202ENST00000428361 PCSK9Q8NBP7 692 aaKnown RBP18.24■□□□□ 0.51
CTDSP1-202ENST00000428361 TTC14Q96N46 770 aa18.24■□□□□ 0.51
CTDSP1-202ENST00000428361 IL17RBQ9NRM6 502 aa18.24■□□□□ 0.51
CTDSP1-202ENST00000428361 HOMER2Q9NSB8 354 aa18.24■□□□□ 0.51
CTDSP1-202ENST00000428361 RNF146Q9NTX7 359 aa18.24■□□□□ 0.51
CTDSP1-202ENST00000428361 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.24■□□□□ 0.51
CTDSP1-202ENST00000428361 PGK1P00558 417 aa18.23■□□□□ 0.51
CTDSP1-202ENST00000428361 TRIM60Q495X7 471 aa18.23■□□□□ 0.51
CTDSP1-202ENST00000428361 CCDC178Q5BJE1 867 aa18.23■□□□□ 0.51
CTDSP1-202ENST00000428361 KCTD1Q719H9 257 aa18.23■□□□□ 0.51
CTDSP1-202ENST00000428361 FERMT2Q96AC1 680 aa18.23■□□□□ 0.51
CTDSP1-202ENST00000428361 TRERF1Q96PN7 1200 aa18.23■□□□□ 0.51
CTDSP1-202ENST00000428361 PRDM5Q9NQX1 630 aaPredicted RBP18.23■□□□□ 0.51
CTDSP1-202ENST00000428361 DIAPH3Q9NSV4 1193 aa18.23■□□□□ 0.51
CTDSP1-202ENST00000428361 TACC3Q9Y6A5 838 aa18.23■□□□□ 0.51
CTDSP1-202ENST00000428361 SMCHD1A6NHR9 2005 aa18.23■□□□□ 0.51
CTDSP1-202ENST00000428361 ADAMTS4O75173 837 aa18.22■□□□□ 0.51
CTDSP1-202ENST00000428361 SNAI1O95863 264 aaPredicted RBP18.22■□□□□ 0.51
CTDSP1-202ENST00000428361 ALAS1P13196 640 aa18.22■□□□□ 0.51
CTDSP1-202ENST00000428361 TAL1P17542 331 aaPredicted RBP18.22■□□□□ 0.51
CTDSP1-202ENST00000428361 SDSP20132 328 aa18.22■□□□□ 0.51
CTDSP1-202ENST00000428361 AKNAD1Q5T1N1 836 aa18.22■□□□□ 0.51
CTDSP1-202ENST00000428361 ARMCX2Q7L311 632 aa18.22■□□□□ 0.51
CTDSP1-202ENST00000428361 ESR2Q92731 530 aa18.22■□□□□ 0.51
CTDSP1-202ENST00000428361 LRCH3Q96II8 777 aa18.22■□□□□ 0.51
CTDSP1-202ENST00000428361 CCPG1Q9ULG6 757 aa18.22■□□□□ 0.51
CTDSP1-202ENST00000428361 PRR12Q9ULL5 1215 aa18.22■□□□□ 0.51
CTDSP1-202ENST00000428361 MROH7Q68CQ1 1323 aa18.22■□□□□ 0.51
CTDSP1-202ENST00000428361 SYNRGQ9UMZ2 1314 aa18.22■□□□□ 0.51
CTDSP1-202ENST00000428361 A0A1W2PQ45 241 aaPredicted RBP18.21■□□□□ 0.51
CTDSP1-202ENST00000428361 A0A1W2PQY0 241 aa18.21■□□□□ 0.51
CTDSP1-202ENST00000428361 SOX1O00570 391 aaPredicted RBP18.21■□□□□ 0.51
CTDSP1-202ENST00000428361 NMT2O60551 498 aa18.21■□□□□ 0.51
CTDSP1-202ENST00000428361 ICAM1P05362 532 aa18.21■□□□□ 0.51
CTDSP1-202ENST00000428361 CST5P28325 142 aaPredicted RBP18.21■□□□□ 0.51
CTDSP1-202ENST00000428361 ZNF589Q86UQ0 364 aaPredicted RBP18.21■□□□□ 0.51
CTDSP1-202ENST00000428361 PLEKHM2Q8IWE5 1019 aa18.21■□□□□ 0.51
CTDSP1-202ENST00000428361 FAM133AQ8N9E0 248 aa18.21■□□□□ 0.51
CTDSP1-202ENST00000428361 GLT1D1Q96MS3 346 aa18.21■□□□□ 0.51
CTDSP1-202ENST00000428361 A1CFQ9NQ94 594 aaKnown RBP18.21■□□□□ 0.51
CTDSP1-202ENST00000428361 STARD7Q9NQZ5 370 aa18.21■□□□□ 0.51
CTDSP1-202ENST00000428361 LAMA3Q16787 3333 aa18.21■□□□□ 0.51
CTDSP1-202ENST00000428361 ZNF536O15090 1300 aa18.21■□□□□ 0.51
CTDSP1-202ENST00000428361 LOC102724159A0A0B4J2E5 919 aa18.2■□□□□ 0.5
CTDSP1-202ENST00000428361 ZNF213O14771 459 aa18.2■□□□□ 0.5
CTDSP1-202ENST00000428361 CLTBP09497 229 aa18.2■□□□□ 0.5
CTDSP1-202ENST00000428361 ACLYP53396 1101 aa18.2■□□□□ 0.5
CTDSP1-202ENST00000428361 PWP2Q15269 919 aaKnown RBP18.2■□□□□ 0.5
CTDSP1-202ENST00000428361 SYDE2Q5VT97 1194 aa18.2■□□□□ 0.5
CTDSP1-202ENST00000428361 CCDC174Q6PII3 467 aa18.2■□□□□ 0.5
CTDSP1-202ENST00000428361 BTNL9Q6UXG8 535 aa18.2■□□□□ 0.5
CTDSP1-202ENST00000428361 IQCA1Q86XH1 822 aa18.2■□□□□ 0.5
CTDSP1-202ENST00000428361 CCDC144CPQ8IYA2 1237 aa18.2■□□□□ 0.5
CTDSP1-202ENST00000428361 AGBL1Q96MI9 1066 aa18.2■□□□□ 0.5
CTDSP1-202ENST00000428361 TOX2Q96NM4 488 aa18.2■□□□□ 0.5
CTDSP1-202ENST00000428361 MPHOSPH6Q99547 160 aaKnown RBP18.2■□□□□ 0.5
CTDSP1-202ENST00000428361 PDLIM7Q9NR12 457 aa18.2■□□□□ 0.5
CTDSP1-202ENST00000428361 ADD3Q9UEY8 706 aaKnown RBP18.2■□□□□ 0.5
CTDSP1-202ENST00000428361 MTMR7Q9Y216 660 aa18.2■□□□□ 0.5
CTDSP1-202ENST00000428361 ELP1O95163 1332 aa18.2■□□□□ 0.5
CTDSP1-202ENST00000428361 DCDC2CA8MYV0 355 aa18.19■□□□□ 0.5
CTDSP1-202ENST00000428361 C6orf222P0C671 652 aaPredicted RBP18.19■□□□□ 0.5
CTDSP1-202ENST00000428361 HAND2P61296 217 aa18.19■□□□□ 0.5
CTDSP1-202ENST00000428361 TLE2Q04725 743 aa18.19■□□□□ 0.5
CTDSP1-202ENST00000428361 CCDC144BQ3MJ40 725 aa18.19■□□□□ 0.5
CTDSP1-202ENST00000428361 KLHDC9Q8NEP7 349 aa18.19■□□□□ 0.5
CTDSP1-202ENST00000428361 EXOC6Q8TAG9 804 aa18.19■□□□□ 0.5
CTDSP1-202ENST00000428361 TMEM47Q9BQJ4 181 aa18.19■□□□□ 0.5
CTDSP1-202ENST00000428361 RANBP17Q9H2T7 1088 aaKnown RBP18.19■□□□□ 0.5
CTDSP1-202ENST00000428361 INCENPQ9NQS7 918 aa18.19■□□□□ 0.5
CTDSP1-202ENST00000428361 CTNNA3Q9UI47 895 aa18.19■□□□□ 0.5
CTDSP1-202ENST00000428361 SZT2Q5T011 3432 aa18.19■□□□□ 0.5
CTDSP1-202ENST00000428361 GJA9P57773 515 aa18.18■□□□□ 0.5
CTDSP1-202ENST00000428361 GPATCH4Q5T3I0 446 aaKnown RBP18.18■□□□□ 0.5
CTDSP1-202ENST00000428361 CWC27Q6UX04 472 aaKnown RBP18.18■□□□□ 0.5
CTDSP1-202ENST00000428361 UPF3AQ9H1J1 476 aaKnown RBP18.18■□□□□ 0.5
CTDSP1-202ENST00000428361 ZEB2O60315 1214 aa18.17■□□□□ 0.5
CTDSP1-202ENST00000428361 PQBP1O60828 265 aaKnown RBP18.17■□□□□ 0.5
CTDSP1-202ENST00000428361 IGHDP01880 384 aa18.17■□□□□ 0.5
CTDSP1-202ENST00000428361 PDHBP11177 359 aa18.17■□□□□ 0.5
CTDSP1-202ENST00000428361 CNTN2Q02246 1040 aa18.17■□□□□ 0.5
CTDSP1-202ENST00000428361 KCNA10Q16322 511 aa18.17■□□□□ 0.5
CTDSP1-202ENST00000428361 IMMTQ16891 758 aaKnown RBP18.17■□□□□ 0.5
CTDSP1-202ENST00000428361 NSMFQ6X4W1 530 aa18.17■□□□□ 0.5
CTDSP1-202ENST00000428361 NOL8Q76FK4 1167 aaKnown RBP18.17■□□□□ 0.5
CTDSP1-202ENST00000428361 ANKRD33Q7Z3H0 272 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms