RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 TRIM49BA6NDI0 452 aa11.99□□□□□ -0.49
ATP2C1-204ENST00000428331 ALS2CLQ60I27 953 aa11.99□□□□□ -0.49
ATP2C1-204ENST00000428331 CCDC84Q86UT8 332 aaPredicted RBP11.99□□□□□ -0.49
ATP2C1-204ENST00000428331 GSPT2Q8IYD1 628 aaKnown RBP11.99□□□□□ -0.49
ATP2C1-204ENST00000428331 BLIDQ8IZY5 108 aa11.99□□□□□ -0.49
ATP2C1-204ENST00000428331 XDHP47989 1333 aa11.99□□□□□ -0.49
ATP2C1-204ENST00000428331 TCRBV5S4A2TA0A5A2 114 aa11.99□□□□□ -0.49
ATP2C1-204ENST00000428331 FECHP22830 423 aa11.99□□□□□ -0.49
ATP2C1-204ENST00000428331 DNA2P51530 1060 aa11.99□□□□□ -0.49
ATP2C1-204ENST00000428331 TYW1BQ6NUM6 668 aa11.99□□□□□ -0.49
ATP2C1-204ENST00000428331 EMBQ6PCB8 327 aa11.99□□□□□ -0.49
ATP2C1-204ENST00000428331 CADPS2Q86UW7 1296 aa11.99□□□□□ -0.49
ATP2C1-204ENST00000428331 C2CD5Q86YS7 1000 aa11.99□□□□□ -0.49
ATP2C1-204ENST00000428331 ENAHQ8N8S7 591 aaPredicted RBP11.99□□□□□ -0.49
ATP2C1-204ENST00000428331 MYCBPQ99417 103 aaPredicted RBP11.99□□□□□ -0.49
ATP2C1-204ENST00000428331 PSMB7Q99436 277 aa11.99□□□□□ -0.49
ATP2C1-204ENST00000428331 SOGA3Q5TF21 947 aa11.99□□□□□ -0.49
ATP2C1-204ENST00000428331 MAATS1Q7Z4T9 603 aa11.99□□□□□ -0.49
ATP2C1-204ENST00000428331 ARFGAP2Q8N6H7 521 aa11.99□□□□□ -0.49
ATP2C1-204ENST00000428331 TSG101Q99816 390 aa11.99□□□□□ -0.49
ATP2C1-204ENST00000428331 CRNKL1Q9BZJ0 848 aaKnown RBP11.99□□□□□ -0.49
ATP2C1-204ENST00000428331 SOS2Q07890 1332 aaPredicted RBP11.99□□□□□ -0.49
ATP2C1-204ENST00000428331 TMEM94Q12767 1356 aa11.99□□□□□ -0.49
ATP2C1-204ENST00000428331 LAMA4Q16363 1823 aa11.99□□□□□ -0.49
ATP2C1-204ENST00000428331 ABL1P00519 1130 aa11.98□□□□□ -0.49
ATP2C1-204ENST00000428331 RGPD2P0DJD1 1756 aa11.98□□□□□ -0.49
ATP2C1-204ENST00000428331 EPS15P42566 896 aa11.98□□□□□ -0.49
ATP2C1-204ENST00000428331 IRAK1P51617 712 aa11.98□□□□□ -0.49
ATP2C1-204ENST00000428331 PAK2Q13177 524 aa11.98□□□□□ -0.49
ATP2C1-204ENST00000428331 CFAP221Q4G0U5 840 aa11.98□□□□□ -0.49
ATP2C1-204ENST00000428331 ODF2Q5BJF6 829 aa11.98□□□□□ -0.49
ATP2C1-204ENST00000428331 TMTC3Q6ZXV5 915 aa11.98□□□□□ -0.49
ATP2C1-204ENST00000428331 ADSSL1Q8N142 457 aa11.98□□□□□ -0.49
ATP2C1-204ENST00000428331 IFT81Q8WYA0 676 aa11.98□□□□□ -0.49
ATP2C1-204ENST00000428331 DNAJC7Q99615 494 aa11.98□□□□□ -0.49
ATP2C1-204ENST00000428331 DISC1Q9NRI5 854 aa11.98□□□□□ -0.49
ATP2C1-204ENST00000428331 TSKSQ9UJT2 592 aa11.98□□□□□ -0.49
ATP2C1-204ENST00000428331 SF3B2Q13435 895 aaKnown RBP11.98□□□□□ -0.49
ATP2C1-204ENST00000428331 HLTFQ14527 1009 aaKnown RBP eCLIP11.98□□□□□ -0.49
ATP2C1-204ENST00000428331 MCTP2Q6DN12 878 aa11.98□□□□□ -0.49
ATP2C1-204ENST00000428331 CNOT6LQ96LI5 555 aaKnown RBP11.98□□□□□ -0.49
ATP2C1-204ENST00000428331 NOX5Q96PH1 765 aa11.98□□□□□ -0.49
ATP2C1-204ENST00000428331 TRHP20396 242 aaPredicted RBP11.98□□□□□ -0.49
ATP2C1-204ENST00000428331 NOP2P46087 812 aaKnown RBP11.98□□□□□ -0.49
ATP2C1-204ENST00000428331 APBA1Q02410 837 aa11.98□□□□□ -0.49
ATP2C1-204ENST00000428331 SEMA3FQ13275 785 aa11.98□□□□□ -0.49
ATP2C1-204ENST00000428331 CNNM4Q6P4Q7 775 aa11.98□□□□□ -0.49
ATP2C1-204ENST00000428331 EEF2KMTQ96G04 330 aa11.98□□□□□ -0.49
ATP2C1-204ENST00000428331 LRWD1Q9UFC0 647 aa11.98□□□□□ -0.49
ATP2C1-204ENST00000428331 CCNE1P24864 410 aa11.98□□□□□ -0.49
ATP2C1-204ENST00000428331 GUCY2CP25092 1073 aa11.98□□□□□ -0.49
ATP2C1-204ENST00000428331 HLFQ16534 295 aa11.98□□□□□ -0.49
ATP2C1-204ENST00000428331 RUBCNQ92622 972 aa11.98□□□□□ -0.49
ATP2C1-204ENST00000428331 GOLGA6L7A0A1B0GV03 622 aa11.97□□□□□ -0.49
ATP2C1-204ENST00000428331 SYF2O95926 243 aaKnown RBP11.97□□□□□ -0.49
ATP2C1-204ENST00000428331 PACS2Q86VP3 889 aa11.97□□□□□ -0.49
ATP2C1-204ENST00000428331 P2RX5Q93086 422 aa11.97□□□□□ -0.49
ATP2C1-204ENST00000428331 ATRNO75882 1429 aa11.97□□□□□ -0.49
ATP2C1-204ENST00000428331 KCNB1Q14721 858 aa11.97□□□□□ -0.49
ATP2C1-204ENST00000428331 USP17L12C9JPN9 530 aa11.97□□□□□ -0.49
ATP2C1-204ENST00000428331 USP17L21D6R901 530 aa11.97□□□□□ -0.49
ATP2C1-204ENST00000428331 CUEDC2Q9H467 287 aa11.97□□□□□ -0.49
ATP2C1-204ENST00000428331 FAM207AQ9NSI2 230 aaPredicted RBP11.97□□□□□ -0.49
ATP2C1-204ENST00000428331 SNX12Q9UMY4 172 aa11.97□□□□□ -0.49
ATP2C1-204ENST00000428331 CAPN7Q9Y6W3 813 aa11.97□□□□□ -0.49
ATP2C1-204ENST00000428331 LMTK3Q96Q04 1460 aa11.97□□□□□ -0.49
ATP2C1-204ENST00000428331 ZNF185O15231 689 aa11.97□□□□□ -0.49
ATP2C1-204ENST00000428331 SRGNP10124 158 aa11.97□□□□□ -0.49
ATP2C1-204ENST00000428331 HEATR3Q7Z4Q2 680 aa11.97□□□□□ -0.49
ATP2C1-204ENST00000428331 GIMAP7Q8NHV1 300 aa11.97□□□□□ -0.49
ATP2C1-204ENST00000428331 NKX2-3Q8TAU0 364 aa11.97□□□□□ -0.49
ATP2C1-204ENST00000428331 ZNF526Q8TF50 670 aaPredicted RBP11.97□□□□□ -0.49
ATP2C1-204ENST00000428331 MAGEF1Q9HAY2 307 aa11.97□□□□□ -0.49
ATP2C1-204ENST00000428331 MKNK2Q9HBH9 465 aa11.97□□□□□ -0.49
ATP2C1-204ENST00000428331 STIM2Q9P246 746 aa11.97□□□□□ -0.49
ATP2C1-204ENST00000428331 SNAP23O00161 211 aa11.96□□□□□ -0.49
ATP2C1-204ENST00000428331 CABP7Q86V35 215 aa11.96□□□□□ -0.49
ATP2C1-204ENST00000428331 ASAP1Q9ULH1 1129 aa11.96□□□□□ -0.49
ATP2C1-204ENST00000428331 HERVK_113P62684 666 aa11.96□□□□□ -0.49
ATP2C1-204ENST00000428331 E2F4Q16254 413 aa11.96□□□□□ -0.49
ATP2C1-204ENST00000428331 TTC19Q6DKK2 380 aaPredicted RBP11.96□□□□□ -0.49
ATP2C1-204ENST00000428331 CCDC155Q8N6L0 562 aa11.96□□□□□ -0.49
ATP2C1-204ENST00000428331 BMP2KQ9NSY1 1161 aaPredicted RBP11.96□□□□□ -0.49
ATP2C1-204ENST00000428331 SAMM50Q9Y512 469 aa11.96□□□□□ -0.49
ATP2C1-204ENST00000428331 PDS5AQ29RF7 1337 aaKnown RBP11.96□□□□□ -0.5
ATP2C1-204ENST00000428331 ATP1A2P50993 1020 aa11.96□□□□□ -0.5
ATP2C1-204ENST00000428331 EARS2Q5JPH6 523 aaKnown RBP11.96□□□□□ -0.5
ATP2C1-204ENST00000428331 PDXDC2PQ6P474 469 aa11.96□□□□□ -0.5
ATP2C1-204ENST00000428331 RRAGAQ7L523 313 aa11.96□□□□□ -0.5
ATP2C1-204ENST00000428331 MMGT1Q8N4V1 131 aa11.96□□□□□ -0.5
ATP2C1-204ENST00000428331 SPATA4Q8NEY3 305 aa11.96□□□□□ -0.5
ATP2C1-204ENST00000428331 RAB34Q9BZG1 259 aa11.96□□□□□ -0.5
ATP2C1-204ENST00000428331 YY1AP1Q9H869 796 aa11.96□□□□□ -0.5
ATP2C1-204ENST00000428331 AGPAT5Q9NUQ2 364 aa11.96□□□□□ -0.5
ATP2C1-204ENST00000428331 KAT6BQ8WYB5 2073 aa11.96□□□□□ -0.5
ATP2C1-204ENST00000428331 RNF225M0QZC1 329 aaPredicted RBP11.95□□□□□ -0.5
ATP2C1-204ENST00000428331 EIF3HO15372 352 aaKnown RBP eCLIP11.95□□□□□ -0.5
ATP2C1-204ENST00000428331 TNNC1P63316 161 aa11.95□□□□□ -0.5
ATP2C1-204ENST00000428331 PKN1Q16512 942 aa11.95□□□□□ -0.5
ATP2C1-204ENST00000428331 TFR2Q9UP52 801 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms