RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 NEK9Q8TD19 979 aa11.24□□□□□ -0.61
LSG1-202ENST00000427461 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.24□□□□□ -0.61
LSG1-202ENST00000427461 ASTN1O14525 1302 aa11.24□□□□□ -0.61
LSG1-202ENST00000427461 KMT2EQ8IZD2 1858 aa11.23□□□□□ -0.61
LSG1-202ENST00000427461 TET1Q8NFU7 2136 aa11.23□□□□□ -0.61
LSG1-202ENST00000427461 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.23□□□□□ -0.61
LSG1-202ENST00000427461 MPHOSPH10O00566 681 aaKnown RBP11.23□□□□□ -0.61
LSG1-202ENST00000427461 PFKMP08237 780 aa11.23□□□□□ -0.61
LSG1-202ENST00000427461 STAT3P40763 770 aa11.23□□□□□ -0.61
LSG1-202ENST00000427461 GORABQ5T7V8 394 aa11.23□□□□□ -0.61
LSG1-202ENST00000427461 EHD4Q9H223 541 aa11.23□□□□□ -0.61
LSG1-202ENST00000427461 ALG13Q9NP73 1137 aaKnown RBP11.23□□□□□ -0.61
LSG1-202ENST00000427461 COPRSQ9NQ92 184 aa11.23□□□□□ -0.61
LSG1-202ENST00000427461 ADAMTS5Q9UNA0 930 aa11.23□□□□□ -0.61
LSG1-202ENST00000427461 ACTN1P12814 892 aa11.22□□□□□ -0.61
LSG1-202ENST00000427461 USP5P45974 858 aa11.22□□□□□ -0.61
LSG1-202ENST00000427461 ERMP1Q7Z2K6 904 aa11.22□□□□□ -0.61
LSG1-202ENST00000427461 SIAH1Q8IUQ4 282 aa11.22□□□□□ -0.61
LSG1-202ENST00000427461 MRPL50Q8N5N7 158 aaKnown RBP11.22□□□□□ -0.61
LSG1-202ENST00000427461 MSL3Q8N5Y2 521 aaKnown RBP11.22□□□□□ -0.61
LSG1-202ENST00000427461 MIGA1Q8NAN2 632 aa11.22□□□□□ -0.61
LSG1-202ENST00000427461 FGD4Q96M96 766 aa11.22□□□□□ -0.61
LSG1-202ENST00000427461 TRMT13Q9NUP7 481 aaKnown RBP11.22□□□□□ -0.61
LSG1-202ENST00000427461 ZNF214Q9UL59 606 aaPredicted RBP11.22□□□□□ -0.61
LSG1-202ENST00000427461 AKAP2Q9Y2D5 859 aa11.22□□□□□ -0.61
LSG1-202ENST00000427461 SIP14410 1827 aa11.21□□□□□ -0.61
LSG1-202ENST00000427461 COL4A6Q14031 1691 aa11.21□□□□□ -0.61
LSG1-202ENST00000427461 DNAJC25-GNG10A0A024R161 153 aa11.21□□□□□ -0.61
LSG1-202ENST00000427461 SOWAHBA6NEL2 793 aa11.21□□□□□ -0.61
LSG1-202ENST00000427461 NKX3-2P78367 333 aa11.21□□□□□ -0.61
LSG1-202ENST00000427461 PUS10Q3MIT2 529 aaKnown RBP11.21□□□□□ -0.61
LSG1-202ENST00000427461 EP400NLQ6ZTU2 488 aa11.21□□□□□ -0.61
LSG1-202ENST00000427461 ASCL5Q7RTU5 278 aa11.21□□□□□ -0.61
LSG1-202ENST00000427461 WDR63Q8IWG1 891 aa11.21□□□□□ -0.61
LSG1-202ENST00000427461 ADHFE1Q8IWW8 467 aa11.21□□□□□ -0.61
LSG1-202ENST00000427461 REPS2Q8NFH8 660 aa11.21□□□□□ -0.61
LSG1-202ENST00000427461 PBXIP1Q96AQ6 731 aa11.21□□□□□ -0.61
LSG1-202ENST00000427461 DDX11Q96FC9 970 aa11.21□□□□□ -0.61
LSG1-202ENST00000427461 FTOQ9C0B1 505 aaKnown RBP eCLIP11.21□□□□□ -0.61
LSG1-202ENST00000427461 KATNBL1Q9H079 304 aa11.21□□□□□ -0.61
LSG1-202ENST00000427461 ABHD16BQ9H3Z7 469 aa11.21□□□□□ -0.61
LSG1-202ENST00000427461 PRKRIP1Q9H875 184 aaPredicted RBP11.21□□□□□ -0.61
LSG1-202ENST00000427461 RIPK3Q9Y572 518 aa11.21□□□□□ -0.61
LSG1-202ENST00000427461 PTPRZ1P23471 2315 aaPredicted RBP11.21□□□□□ -0.62
LSG1-202ENST00000427461 VWA5AO00534 786 aa11.2□□□□□ -0.62
LSG1-202ENST00000427461 CYP2E1P05181 493 aaPredicted RBP11.2□□□□□ -0.62
LSG1-202ENST00000427461 UBTFL1P0CB47 393 aaPredicted RBP11.2□□□□□ -0.62
LSG1-202ENST00000427461 SLC4A3P48751 1232 aa11.2□□□□□ -0.62
LSG1-202ENST00000427461 CCDC184Q52MB2 194 aa11.2□□□□□ -0.62
LSG1-202ENST00000427461 HERC4Q5GLZ8 1057 aaPredicted RBP11.2□□□□□ -0.62
LSG1-202ENST00000427461 NOL8Q76FK4 1167 aaKnown RBP11.2□□□□□ -0.62
LSG1-202ENST00000427461 ARMCX2Q7L311 632 aa11.2□□□□□ -0.62
LSG1-202ENST00000427461 BMP8AQ7Z5Y6 402 aa11.2□□□□□ -0.62
LSG1-202ENST00000427461 TTC6Q86TZ1 520 aa11.2□□□□□ -0.62
LSG1-202ENST00000427461 RNF135Q8IUD6 432 aa11.2□□□□□ -0.62
LSG1-202ENST00000427461 PPP1R13LQ8WUF5 828 aa11.2□□□□□ -0.62
LSG1-202ENST00000427461 ATOH1Q92858 354 aaPredicted RBP11.2□□□□□ -0.62
LSG1-202ENST00000427461 ALDH8A1Q9H2A2 487 aaPredicted RBP11.2□□□□□ -0.62
LSG1-202ENST00000427461 PRKAG3Q9UGI9 489 aa11.2□□□□□ -0.62
LSG1-202ENST00000427461 CACNA1BQ00975 2339 aa11.19□□□□□ -0.62
LSG1-202ENST00000427461 TMEM221A6NGB7 291 aa11.19□□□□□ -0.62
LSG1-202ENST00000427461 M0R296 226 aa11.19□□□□□ -0.62
LSG1-202ENST00000427461 WDR46O15213 610 aaKnown RBP11.19□□□□□ -0.62
LSG1-202ENST00000427461 CABYRO75952 493 aa11.19□□□□□ -0.62
LSG1-202ENST00000427461 CYP7A1P22680 504 aa11.19□□□□□ -0.62
LSG1-202ENST00000427461 ID4P47928 161 aa11.19□□□□□ -0.62
LSG1-202ENST00000427461 ERVK-21P61565 698 aa11.19□□□□□ -0.62
LSG1-202ENST00000427461 TNFAIP2Q03169 654 aa11.19□□□□□ -0.62
LSG1-202ENST00000427461 GABPAQ06546 454 aa11.19□□□□□ -0.62
LSG1-202ENST00000427461 FSCN1Q16658 493 aaKnown RBP11.19□□□□□ -0.62
LSG1-202ENST00000427461 TMEM63BQ5T3F8 832 aa11.19□□□□□ -0.62
LSG1-202ENST00000427461 TLK2Q86UE8 772 aa11.19□□□□□ -0.62
LSG1-202ENST00000427461 EDAQ92838 391 aa11.19□□□□□ -0.62
LSG1-202ENST00000427461 PRRX2Q99811 253 aa11.19□□□□□ -0.62
LSG1-202ENST00000427461 ZBED2Q9BTP6 218 aa11.19□□□□□ -0.62
LSG1-202ENST00000427461 UPF3BQ9BZI7 483 aaKnown RBP11.19□□□□□ -0.62
LSG1-202ENST00000427461 VCPKMTQ9H867 229 aa11.19□□□□□ -0.62
LSG1-202ENST00000427461 PIH1D3Q9NQM4 214 aaKnown RBP11.19□□□□□ -0.62
LSG1-202ENST00000427461 TANC1Q9C0D5 1861 aa11.19□□□□□ -0.62
LSG1-202ENST00000427461 TNKSO95271 1327 aa11.18□□□□□ -0.62
LSG1-202ENST00000427461 LINC01553A4QN01 128 aa11.18□□□□□ -0.62
LSG1-202ENST00000427461 H0Y858 1186 aa11.18□□□□□ -0.62
LSG1-202ENST00000427461 DYNC1LI2O43237 492 aaPredicted RBP11.18□□□□□ -0.62
LSG1-202ENST00000427461 IQCF3P0C7M6 154 aa11.18□□□□□ -0.62
LSG1-202ENST00000427461 UQCRFS1P1P0C7P4 283 aa11.18□□□□□ -0.62
LSG1-202ENST00000427461 VCPP55072 806 aaKnown RBP11.18□□□□□ -0.62
LSG1-202ENST00000427461 DEFB103AP81534 67 aa11.18□□□□□ -0.62
LSG1-202ENST00000427461 ZNF467Q7Z7K2 595 aaPredicted RBP11.18□□□□□ -0.62
LSG1-202ENST00000427461 SUGP1Q8IWZ8 645 aaKnown RBP11.18□□□□□ -0.62
LSG1-202ENST00000427461 CCDC144CPQ8IYA2 1237 aa11.18□□□□□ -0.62
LSG1-202ENST00000427461 TGS1Q96RS0 853 aaKnown RBP11.18□□□□□ -0.62
LSG1-202ENST00000427461 TLR9Q9NR96 1032 aa11.18□□□□□ -0.62
LSG1-202ENST00000427461 GNEQ9Y223 722 aaKnown RBP11.18□□□□□ -0.62
LSG1-202ENST00000427461 TMX2Q9Y320 296 aa11.18□□□□□ -0.62
LSG1-202ENST00000427461 DDX49Q9Y6V7 483 aaKnown RBP11.18□□□□□ -0.62
LSG1-202ENST00000427461 DMDP11532 3685 aa11.18□□□□□ -0.62
LSG1-202ENST00000427461 PTPRCP08575 1304 aa11.17□□□□□ -0.62
LSG1-202ENST00000427461 VPS13AQ96RL7 3174 aa11.17□□□□□ -0.62
LSG1-202ENST00000427461 MED19A0JLT2 244 aaPredicted RBP11.17□□□□□ -0.62
LSG1-202ENST00000427461 SPDYE4A6NLX3 237 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms