RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 ACSBG1Q96GR2 724 aa15.75■□□□□ 0.11
PTPN13-203ENST00000427191 ADPGKQ9BRR6 497 aa15.75■□□□□ 0.11
PTPN13-203ENST00000427191 INTS9Q9NV88 658 aaKnown RBP15.75■□□□□ 0.11
PTPN13-203ENST00000427191 KIAA1468Q9P260 1216 aa15.75■□□□□ 0.11
PTPN13-203ENST00000427191 ARHGEF37A1IGU5 675 aa15.75■□□□□ 0.11
PTPN13-203ENST00000427191 NSFP46459 744 aaKnown RBP15.75■□□□□ 0.11
PTPN13-203ENST00000427191 BFSP1Q12934 665 aa15.75■□□□□ 0.11
PTPN13-203ENST00000427191 ATP6V0A1Q93050 837 aa15.75■□□□□ 0.11
PTPN13-203ENST00000427191 UPF3AQ9H1J1 476 aaKnown RBP15.75■□□□□ 0.11
PTPN13-203ENST00000427191 NPATQ14207 1427 aa15.75■□□□□ 0.11
PTPN13-203ENST00000427191 UHRF1BP1Q6BDS2 1440 aa15.75■□□□□ 0.11
PTPN13-203ENST00000427191 ST13P4Q8IZP2 240 aaPredicted RBP15.75■□□□□ 0.11
PTPN13-203ENST00000427191 RIMS2Q9UQ26 1411 aa15.75■□□□□ 0.11
PTPN13-203ENST00000427191 IPO5O00410 1097 aaKnown RBP15.75■□□□□ 0.11
PTPN13-203ENST00000427191 EEF1DP29692 281 aaKnown RBP15.75■□□□□ 0.11
PTPN13-203ENST00000427191 IFNA8P32881 189 aa15.75■□□□□ 0.11
PTPN13-203ENST00000427191 EYA2O00167 538 aa15.75■□□□□ 0.11
PTPN13-203ENST00000427191 PYGBP11216 843 aa15.75■□□□□ 0.11
PTPN13-203ENST00000427191 XPOTO43592 962 aaKnown RBP15.74■□□□□ 0.11
PTPN13-203ENST00000427191 GUCY2FP51841 1108 aa15.74■□□□□ 0.11
PTPN13-203ENST00000427191 U2AF1L4Q8WU68 220 aaKnown RBP15.74■□□□□ 0.11
PTPN13-203ENST00000427191 CEP19Q96LK0 163 aa15.74■□□□□ 0.11
PTPN13-203ENST00000427191 NSFL1CQ9UNZ2 370 aaKnown RBP15.74■□□□□ 0.11
PTPN13-203ENST00000427191 INSRP06213 1382 aa15.74■□□□□ 0.11
PTPN13-203ENST00000427191 V9GY48 417 aaPredicted RBP15.74■□□□□ 0.11
PTPN13-203ENST00000427191 ATP5HO75947 161 aa15.74■□□□□ 0.11
PTPN13-203ENST00000427191 MCF2L2Q86YR7 1114 aa15.74■□□□□ 0.11
PTPN13-203ENST00000427191 POLR3CQ9BUI4 534 aaPredicted RBP15.74■□□□□ 0.11
PTPN13-203ENST00000427191 TAF11Q15544 211 aa15.74■□□□□ 0.11
PTPN13-203ENST00000427191 DDB1Q16531 1140 aa15.74■□□□□ 0.11
PTPN13-203ENST00000427191 TNNI3KQ59H18 835 aa15.74■□□□□ 0.11
PTPN13-203ENST00000427191 PLBD2Q8NHP8 589 aa15.74■□□□□ 0.11
PTPN13-203ENST00000427191 GIPC2Q8TF65 315 aa15.74■□□□□ 0.11
PTPN13-203ENST00000427191 FAM207AQ9NSI2 230 aaPredicted RBP15.74■□□□□ 0.11
PTPN13-203ENST00000427191 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.74■□□□□ 0.11
PTPN13-203ENST00000427191 FPGT-TNNI3KV9GXZ4 949 aa15.74■□□□□ 0.11
PTPN13-203ENST00000427191 HNRNPCL2B2RXH8 293 aa15.74■□□□□ 0.11
PTPN13-203ENST00000427191 HNRNPCL1O60812 293 aaKnown RBP15.74■□□□□ 0.11
PTPN13-203ENST00000427191 HEXIM1O94992 359 aaKnown RBP15.74■□□□□ 0.11
PTPN13-203ENST00000427191 PPARGP37231 505 aaPredicted RBP15.74■□□□□ 0.11
PTPN13-203ENST00000427191 TMCO5AQ8N6Q1 288 aa15.74■□□□□ 0.11
PTPN13-203ENST00000427191 B4E1Z4 1266 aa15.74■□□□□ 0.11
PTPN13-203ENST00000427191 GPAA1O43292 621 aa15.74■□□□□ 0.11
PTPN13-203ENST00000427191 PHLPP2Q6ZVD8 1323 aa15.74■□□□□ 0.11
PTPN13-203ENST00000427191 ATG16L1Q676U5 607 aa15.73■□□□□ 0.11
PTPN13-203ENST00000427191 IQSEC3Q9UPP2 1182 aaPredicted RBP15.73■□□□□ 0.11
PTPN13-203ENST00000427191 UHRF1BP1LA0JNW5 1464 aa15.73■□□□□ 0.11
PTPN13-203ENST00000427191 IQCB1Q15051 598 aa15.73■□□□□ 0.11
PTPN13-203ENST00000427191 POMGNT1Q8WZA1 660 aa15.73■□□□□ 0.11
PTPN13-203ENST00000427191 COL4A3BPQ9Y5P4 624 aa15.73■□□□□ 0.11
PTPN13-203ENST00000427191 HGSO14964 777 aaPredicted RBP15.73■□□□□ 0.11
PTPN13-203ENST00000427191 ALS2CLQ60I27 953 aa15.73■□□□□ 0.11
PTPN13-203ENST00000427191 KRT80Q6KB66 452 aa15.73■□□□□ 0.11
PTPN13-203ENST00000427191 SCYL3Q8IZE3 742 aa15.73■□□□□ 0.11
PTPN13-203ENST00000427191 LMTK3Q96Q04 1460 aa15.73■□□□□ 0.11
PTPN13-203ENST00000427191 ZNF274Q96GC6 653 aaPredicted RBP15.73■□□□□ 0.11
PTPN13-203ENST00000427191 PPP2R2CQ9Y2T4 447 aa15.73■□□□□ 0.11
PTPN13-203ENST00000427191 PPME1Q9Y570 386 aa15.73■□□□□ 0.11
PTPN13-203ENST00000427191 TNRQ92752 1358 aa15.73■□□□□ 0.11
PTPN13-203ENST00000427191 HIBADHP31937 336 aaKnown RBP15.73■□□□□ 0.11
PTPN13-203ENST00000427191 ZKSCAN8Q15776 578 aaPredicted RBP15.73■□□□□ 0.11
PTPN13-203ENST00000427191 KLC3Q6P597 504 aa15.73■□□□□ 0.11
PTPN13-203ENST00000427191 CNBD1Q8NA66 436 aa15.73■□□□□ 0.11
PTPN13-203ENST00000427191 DAAM1Q9Y4D1 1078 aa15.73■□□□□ 0.11
PTPN13-203ENST00000427191 EFCAB14O75071 495 aa15.73■□□□□ 0.11
PTPN13-203ENST00000427191 BSPRYQ5W0U4 402 aa15.73■□□□□ 0.11
PTPN13-203ENST00000427191 KBTBD3Q8NAB2 608 aa15.73■□□□□ 0.11
PTPN13-203ENST00000427191 ADGRF5Q8IZF2 1346 aa15.73■□□□□ 0.11
PTPN13-203ENST00000427191 GSTA4O15217 222 aa15.73■□□□□ 0.11
PTPN13-203ENST00000427191 CHURC1Q8WUH1 139 aa15.73■□□□□ 0.11
PTPN13-203ENST00000427191 GFM2Q969S9 779 aaKnown RBP15.73■□□□□ 0.11
PTPN13-203ENST00000427191 POTEB3A0JP26 581 aa15.72■□□□□ 0.11
PTPN13-203ENST00000427191 RAP1GDS1P52306 607 aa15.72■□□□□ 0.11
PTPN13-203ENST00000427191 TNFAIP1Q13829 316 aa15.72■□□□□ 0.11
PTPN13-203ENST00000427191 POTEBQ6S5H4 581 aa15.72■□□□□ 0.11
PTPN13-203ENST00000427191 KLHDC4Q8TBB5 520 aa15.72■□□□□ 0.11
PTPN13-203ENST00000427191 SGSM2O43147 1006 aa15.72■□□□□ 0.11
PTPN13-203ENST00000427191 NBPF9Q3BBW0 867 aa15.72■□□□□ 0.11
PTPN13-203ENST00000427191 DONSONQ9NYP3 566 aa15.72■□□□□ 0.11
PTPN13-203ENST00000427191 TMEM247A6NEH6 219 aa15.72■□□□□ 0.11
PTPN13-203ENST00000427191 XPO4Q9C0E2 1151 aaKnown RBP15.72■□□□□ 0.11
PTPN13-203ENST00000427191 CFAP43Q8NDM7 1665 aa15.72■□□□□ 0.11
PTPN13-203ENST00000427191 KCNA4P22459 653 aa15.72■□□□□ 0.11
PTPN13-203ENST00000427191 LIG4P49917 911 aa15.72■□□□□ 0.11
PTPN13-203ENST00000427191 ETF1P62495 437 aaKnown RBP15.72■□□□□ 0.11
PTPN13-203ENST00000427191 TMTC4Q5T4D3 741 aa15.72■□□□□ 0.11
PTPN13-203ENST00000427191 KRT39Q6A163 491 aa15.72■□□□□ 0.11
PTPN13-203ENST00000427191 GDAP1L1Q96MZ0 367 aa15.72■□□□□ 0.11
PTPN13-203ENST00000427191 GGA1Q9UJY5 639 aa15.72■□□□□ 0.11
PTPN13-203ENST00000427191 EEF1GP26641 437 aaKnown RBP15.72■□□□□ 0.11
PTPN13-203ENST00000427191 CDC37L1Q7L3B6 337 aa15.72■□□□□ 0.11
PTPN13-203ENST00000427191 AS3MTQ9HBK9 375 aa15.72■□□□□ 0.11
PTPN13-203ENST00000427191 PPP2R5AQ15172 486 aa15.72■□□□□ 0.11
PTPN13-203ENST00000427191 MED10Q9BTT4 135 aa15.72■□□□□ 0.11
PTPN13-203ENST00000427191 TFCP2L1Q9NZI6 479 aa15.72■□□□□ 0.11
PTPN13-203ENST00000427191 NME8Q8N427 588 aa15.72■□□□□ 0.11
PTPN13-203ENST00000427191 METTL22Q9BUU2 404 aaPredicted RBP15.72■□□□□ 0.11
PTPN13-203ENST00000427191 SPDYE16A6NNV3 312 aaPredicted RBP15.71■□□□□ 0.11
PTPN13-203ENST00000427191 GTPBP6O43824 516 aaPredicted RBP15.71■□□□□ 0.11
PTPN13-203ENST00000427191 LONP1P36776 959 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms