RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 FOXP2O15409 715 aa12.13□□□□□ -0.47
HDLBP-213ENST00000427007 DUSP11O75319 330 aaKnown RBP12.13□□□□□ -0.47
HDLBP-213ENST00000427007 C6orf222P0C671 652 aaPredicted RBP12.13□□□□□ -0.47
HDLBP-213ENST00000427007 MCCP23508 829 aa12.13□□□□□ -0.47
HDLBP-213ENST00000427007 STAT2P52630 851 aa12.13□□□□□ -0.47
HDLBP-213ENST00000427007 OAZ1P54368 228 aa12.13□□□□□ -0.47
HDLBP-213ENST00000427007 SNAP25P60880 206 aa12.13□□□□□ -0.47
HDLBP-213ENST00000427007 CNTN2Q02246 1040 aa12.13□□□□□ -0.47
HDLBP-213ENST00000427007 FAAP100Q0VG06 881 aa12.13□□□□□ -0.47
HDLBP-213ENST00000427007 CCDC144BQ3MJ40 725 aa12.13□□□□□ -0.47
HDLBP-213ENST00000427007 CCSAPQ6IQ19 270 aaPredicted RBP12.13□□□□□ -0.47
HDLBP-213ENST00000427007 ARMCX2Q7L311 632 aa12.13□□□□□ -0.47
HDLBP-213ENST00000427007 ZNF467Q7Z7K2 595 aaPredicted RBP12.13□□□□□ -0.47
HDLBP-213ENST00000427007 CCDC144CPQ8IYA2 1237 aa12.13□□□□□ -0.47
HDLBP-213ENST00000427007 KLHDC9Q8NEP7 349 aa12.13□□□□□ -0.47
HDLBP-213ENST00000427007 NUP133Q8WUM0 1156 aa12.13□□□□□ -0.47
HDLBP-213ENST00000427007 RNPC3Q96LT9 517 aaKnown RBP12.13□□□□□ -0.47
HDLBP-213ENST00000427007 AGBL1Q96MI9 1066 aa12.13□□□□□ -0.47
HDLBP-213ENST00000427007 SYNPO2Q9UMS6 1093 aa12.13□□□□□ -0.47
HDLBP-213ENST00000427007 STX8Q9UNK0 236 aa12.13□□□□□ -0.47
HDLBP-213ENST00000427007 MTMR7Q9Y216 660 aa12.13□□□□□ -0.47
HDLBP-213ENST00000427007 LRRC37A2A6NM11 1700 aa12.13□□□□□ -0.47
HDLBP-213ENST00000427007 KIAA0355O15063 1070 aa12.12□□□□□ -0.47
HDLBP-213ENST00000427007 NMT2O60551 498 aa12.12□□□□□ -0.47
HDLBP-213ENST00000427007 ASGR1P07306 291 aa12.12□□□□□ -0.47
HDLBP-213ENST00000427007 SLC1A4P43007 532 aa12.12□□□□□ -0.47
HDLBP-213ENST00000427007 FPGSQ05932 587 aa12.12□□□□□ -0.47
HDLBP-213ENST00000427007 VPS53Q5VIR6 699 aa12.12□□□□□ -0.47
HDLBP-213ENST00000427007 CCDC174Q6PII3 467 aa12.12□□□□□ -0.47
HDLBP-213ENST00000427007 KCTD1Q719H9 257 aa12.12□□□□□ -0.47
HDLBP-213ENST00000427007 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.12□□□□□ -0.47
HDLBP-213ENST00000427007 ANKRD33Q7Z3H0 272 aa12.12□□□□□ -0.47
HDLBP-213ENST00000427007 GLT1D1Q96MS3 346 aa12.12□□□□□ -0.47
HDLBP-213ENST00000427007 CDX2Q99626 313 aaPredicted RBP12.12□□□□□ -0.47
HDLBP-213ENST00000427007 ABHD16BQ9H3Z7 469 aa12.12□□□□□ -0.47
HDLBP-213ENST00000427007 ACAD9Q9H845 621 aa12.12□□□□□ -0.47
HDLBP-213ENST00000427007 RNF146Q9NTX7 359 aa12.12□□□□□ -0.47
HDLBP-213ENST00000427007 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.12□□□□□ -0.47
HDLBP-213ENST00000427007 DDX49Q9Y6V7 483 aaKnown RBP12.12□□□□□ -0.47
HDLBP-213ENST00000427007 ZNF536O15090 1300 aa12.11□□□□□ -0.47
HDLBP-213ENST00000427007 SALL3Q9BXA9 1300 aa12.11□□□□□ -0.47
HDLBP-213ENST00000427007 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.11□□□□□ -0.47
HDLBP-213ENST00000427007 DCDC2CA8MYV0 355 aa12.11□□□□□ -0.47
HDLBP-213ENST00000427007 FDX1P10109 184 aa12.11□□□□□ -0.47
HDLBP-213ENST00000427007 ALAS1P13196 640 aa12.11□□□□□ -0.47
HDLBP-213ENST00000427007 SMAD3P84022 425 aaKnown RBP12.11□□□□□ -0.47
HDLBP-213ENST00000427007 ANKRD45Q5TZF3 282 aa12.11□□□□□ -0.47
HDLBP-213ENST00000427007 FAM160B2Q86V87 743 aa12.11□□□□□ -0.47
HDLBP-213ENST00000427007 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.11□□□□□ -0.47
HDLBP-213ENST00000427007 CHURC1Q8WUH1 139 aa12.11□□□□□ -0.47
HDLBP-213ENST00000427007 STAG1Q8WVM7 1258 aa12.11□□□□□ -0.47
HDLBP-213ENST00000427007 MYLIPQ8WY64 445 aa12.11□□□□□ -0.47
HDLBP-213ENST00000427007 VTI1AQ96AJ9 217 aa12.11□□□□□ -0.47
HDLBP-213ENST00000427007 GMCL1Q96IK5 515 aa12.11□□□□□ -0.47
HDLBP-213ENST00000427007 TOX2Q96NM4 488 aa12.11□□□□□ -0.47
HDLBP-213ENST00000427007 KATNBL1Q9H079 304 aa12.11□□□□□ -0.47
HDLBP-213ENST00000427007 TTYH1Q9H313 450 aaPredicted RBP12.11□□□□□ -0.47
HDLBP-213ENST00000427007 SEMA6BQ9H3T3 888 aa12.11□□□□□ -0.47
HDLBP-213ENST00000427007 SPC25Q9HBM1 224 aa12.11□□□□□ -0.47
HDLBP-213ENST00000427007 A1CFQ9NQ94 594 aaKnown RBP12.11□□□□□ -0.47
HDLBP-213ENST00000427007 IL17RBQ9NRM6 502 aa12.11□□□□□ -0.47
HDLBP-213ENST00000427007 LCTP09848 1927 aa12.11□□□□□ -0.47
HDLBP-213ENST00000427007 UNC80Q8N2C7 3258 aa12.1□□□□□ -0.47
HDLBP-213ENST00000427007 SOWAHBA6NEL2 793 aa12.1□□□□□ -0.47
HDLBP-213ENST00000427007 RANBP6O60518 1105 aaKnown RBP12.1□□□□□ -0.47
HDLBP-213ENST00000427007 CST5P28325 142 aaPredicted RBP12.1□□□□□ -0.47
HDLBP-213ENST00000427007 RRP1P56182 461 aaKnown RBP12.1□□□□□ -0.47
HDLBP-213ENST00000427007 GJA9P57773 515 aa12.1□□□□□ -0.47
HDLBP-213ENST00000427007 BEX3Q00994 111 aa12.1□□□□□ -0.47
HDLBP-213ENST00000427007 MUM1L1Q5H9M0 696 aa12.1□□□□□ -0.47
HDLBP-213ENST00000427007 GNASQ5JWF2 1037 aa12.1□□□□□ -0.47
HDLBP-213ENST00000427007 FAM133AQ8N9E0 248 aa12.1□□□□□ -0.47
HDLBP-213ENST00000427007 PCSK9Q8NBP7 692 aaKnown RBP12.1□□□□□ -0.47
HDLBP-213ENST00000427007 TRERF1Q96PN7 1200 aa12.1□□□□□ -0.47
HDLBP-213ENST00000427007 CRBNQ96SW2 442 aa12.1□□□□□ -0.47
HDLBP-213ENST00000427007 UPF3AQ9H1J1 476 aaKnown RBP12.1□□□□□ -0.47
HDLBP-213ENST00000427007 TOMM22Q9NS69 142 aa12.1□□□□□ -0.47
HDLBP-213ENST00000427007 ZBTB47Q9UFB7 747 aaPredicted RBP12.1□□□□□ -0.47
HDLBP-213ENST00000427007 PRR12Q9ULL5 1215 aa12.1□□□□□ -0.47
HDLBP-213ENST00000427007 ELP1O95163 1332 aa12.1□□□□□ -0.47
HDLBP-213ENST00000427007 EYSQ5T1H1 3165 aa12.09□□□□□ -0.47
HDLBP-213ENST00000427007 CTAGE5O15320 804 aa12.09□□□□□ -0.47
HDLBP-213ENST00000427007 TIMP1P01033 207 aa12.09□□□□□ -0.47
HDLBP-213ENST00000427007 PTGS1P23219 599 aa12.09□□□□□ -0.47
HDLBP-213ENST00000427007 TNFAIP2Q03169 654 aa12.09□□□□□ -0.47
HDLBP-213ENST00000427007 CCDC96Q2M329 555 aa12.09□□□□□ -0.47
HDLBP-213ENST00000427007 RCSD1Q6JBY9 416 aa12.09□□□□□ -0.47
HDLBP-213ENST00000427007 NOL8Q76FK4 1167 aaKnown RBP12.09□□□□□ -0.47
HDLBP-213ENST00000427007 EEPD1Q7L9B9 569 aa12.09□□□□□ -0.47
HDLBP-213ENST00000427007 EVI5LQ96CN4 794 aa12.09□□□□□ -0.47
HDLBP-213ENST00000427007 PPP1R12CQ9BZL4 782 aa12.09□□□□□ -0.47
HDLBP-213ENST00000427007 TBX21Q9UL17 535 aa12.09□□□□□ -0.47
HDLBP-213ENST00000427007 ASTN1O14525 1302 aa12.09□□□□□ -0.47
HDLBP-213ENST00000427007 MROH7Q68CQ1 1323 aa12.09□□□□□ -0.47
HDLBP-213ENST00000427007 A0A0U1RQG5 324 aaPredicted RBP12.08□□□□□ -0.48
HDLBP-213ENST00000427007 ARVCFO00192 962 aa12.08□□□□□ -0.48
HDLBP-213ENST00000427007 PLA2G6O60733 806 aa12.08□□□□□ -0.48
HDLBP-213ENST00000427007 SLC16A2P36021 539 aa12.08□□□□□ -0.48
HDLBP-213ENST00000427007 CDK7P50613 346 aa12.08□□□□□ -0.48
HDLBP-213ENST00000427007 TKFCQ3LXA3 575 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms