RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.31■□□□□ 0.36
GINS3-203ENST00000426538 CEP131Q9UPN4 1083 aa17.31■□□□□ 0.36
GINS3-203ENST00000426538 PCDHA1Q9Y5I3 950 aa17.31■□□□□ 0.36
GINS3-203ENST00000426538 SPTLC2O15270 562 aa17.3■□□□□ 0.36
GINS3-203ENST00000426538 ATP2B1P20020 1258 aa17.3■□□□□ 0.36
GINS3-203ENST00000426538 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.3■□□□□ 0.36
GINS3-203ENST00000426538 FBXO11Q86XK2 927 aa17.3■□□□□ 0.36
GINS3-203ENST00000426538 TNFRSF25Q93038 417 aa17.3■□□□□ 0.36
GINS3-203ENST00000426538 PCDHA6Q9UN73 950 aa17.3■□□□□ 0.36
GINS3-203ENST00000426538 PCDHA8Q9Y5H6 950 aa17.3■□□□□ 0.36
GINS3-203ENST00000426538 PPP1R11O60927 126 aaPredicted RBP17.3■□□□□ 0.36
GINS3-203ENST00000426538 TOB1P50616 345 aaPredicted RBP17.3■□□□□ 0.36
GINS3-203ENST00000426538 ADCY7P51828 1080 aa17.3■□□□□ 0.36
GINS3-203ENST00000426538 MRPL12P52815 198 aaKnown RBP17.3■□□□□ 0.36
GINS3-203ENST00000426538 VGLL4Q14135 290 aa17.3■□□□□ 0.36
GINS3-203ENST00000426538 SLC39A14Q15043 492 aa17.3■□□□□ 0.36
GINS3-203ENST00000426538 SAMD1Q6SPF0 538 aaPredicted RBP17.3■□□□□ 0.36
GINS3-203ENST00000426538 ANKRD13AQ8IZ07 590 aa17.3■□□□□ 0.36
GINS3-203ENST00000426538 JMYQ8N9B5 988 aa17.3■□□□□ 0.36
GINS3-203ENST00000426538 GLT8D2Q9H1C3 349 aa17.3■□□□□ 0.36
GINS3-203ENST00000426538 EMILIN3Q9NT22 766 aa17.3■□□□□ 0.36
GINS3-203ENST00000426538 M0R2N6 131 aa17.29■□□□□ 0.36
GINS3-203ENST00000426538 TRAPPC10P48553 1259 aa17.29■□□□□ 0.36
GINS3-203ENST00000426538 SNAP25P60880 206 aa17.29■□□□□ 0.36
GINS3-203ENST00000426538 EARS2Q5JPH6 523 aaKnown RBP17.29■□□□□ 0.36
GINS3-203ENST00000426538 ARMC9Q7Z3E5 817 aa17.29■□□□□ 0.36
GINS3-203ENST00000426538 REXO1Q8N1G1 1221 aaKnown RBP17.29■□□□□ 0.36
GINS3-203ENST00000426538 PRPF38AQ8NAV1 312 aaKnown RBP17.29■□□□□ 0.36
GINS3-203ENST00000426538 RASGRP4Q8TDF6 673 aa17.29■□□□□ 0.36
GINS3-203ENST00000426538 CUL5Q93034 780 aa17.29■□□□□ 0.36
GINS3-203ENST00000426538 TANGO6Q9C0B7 1094 aa17.29■□□□□ 0.36
GINS3-203ENST00000426538 GZF1Q9H116 711 aaPredicted RBP17.29■□□□□ 0.36
GINS3-203ENST00000426538 PSTPIP2Q9H939 334 aa17.29■□□□□ 0.36
GINS3-203ENST00000426538 RIC8AQ9NPQ8 531 aa17.29■□□□□ 0.36
GINS3-203ENST00000426538 CAVIN1Q6NZI2 390 aaKnown RBP17.28■□□□□ 0.36
GINS3-203ENST00000426538 KRT25Q7Z3Z0 450 aa17.28■□□□□ 0.36
GINS3-203ENST00000426538 RBM46Q8TBY0 533 aaKnown RBP17.28■□□□□ 0.36
GINS3-203ENST00000426538 SYAP1Q96A49 352 aaPredicted RBP17.28■□□□□ 0.36
GINS3-203ENST00000426538 PGBD1Q96JS3 809 aa17.28■□□□□ 0.36
GINS3-203ENST00000426538 TMOD4Q9NZQ9 345 aa17.28■□□□□ 0.36
GINS3-203ENST00000426538 AFG3L2Q9Y4W6 797 aa17.28■□□□□ 0.36
GINS3-203ENST00000426538 PCDHB6Q9Y5E3 794 aa17.28■□□□□ 0.36
GINS3-203ENST00000426538 SNCAIPQ9Y6H5 919 aa17.28■□□□□ 0.36
GINS3-203ENST00000426538 FAM205CA6NFA0 338 aa17.27■□□□□ 0.36
GINS3-203ENST00000426538 ADAMTS3O15072 1205 aa17.27■□□□□ 0.36
GINS3-203ENST00000426538 PPP6R2O75170 966 aa17.27■□□□□ 0.36
GINS3-203ENST00000426538 POTEIP0CG38 1075 aa17.27■□□□□ 0.36
GINS3-203ENST00000426538 POTEJP0CG39 1038 aa17.27■□□□□ 0.36
GINS3-203ENST00000426538 VCAM1P19320 739 aa17.27■□□□□ 0.36
GINS3-203ENST00000426538 HMGCS2P54868 508 aa17.27■□□□□ 0.36
GINS3-203ENST00000426538 USH1GQ495M9 461 aa17.27■□□□□ 0.36
GINS3-203ENST00000426538 MAP1SQ66K74 1059 aaPredicted RBP17.27■□□□□ 0.36
GINS3-203ENST00000426538 ADALQ6DHV7 355 aa17.27■□□□□ 0.36
GINS3-203ENST00000426538 SLF1Q9BQI6 1058 aa17.27■□□□□ 0.36
GINS3-203ENST00000426538 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.27■□□□□ 0.36
GINS3-203ENST00000426538 FBXO28Q9NVF7 368 aa17.27■□□□□ 0.36
GINS3-203ENST00000426538 BIN2Q9UBW5 565 aaPredicted RBP17.27■□□□□ 0.36
GINS3-203ENST00000426538 PCDHA7Q9UN72 937 aa17.27■□□□□ 0.36
GINS3-203ENST00000426538 FLOT1O75955 427 aa17.27■□□□□ 0.35
GINS3-203ENST00000426538 BMP15O95972 392 aa17.27■□□□□ 0.35
GINS3-203ENST00000426538 DGKZQ13574 1117 aa17.27■□□□□ 0.35
GINS3-203ENST00000426538 PTPAQ15257 358 aa17.27■□□□□ 0.35
GINS3-203ENST00000426538 MAP3K11Q16584 847 aa17.27■□□□□ 0.35
GINS3-203ENST00000426538 NOM1Q5C9Z4 860 aaKnown RBP17.27■□□□□ 0.35
GINS3-203ENST00000426538 TTC38Q5R3I4 469 aa17.27■□□□□ 0.35
GINS3-203ENST00000426538 RANBP17Q9H2T7 1088 aaKnown RBP17.27■□□□□ 0.35
GINS3-203ENST00000426538 RPAP3Q9H6T3 665 aaPredicted RBP17.27■□□□□ 0.35
GINS3-203ENST00000426538 MARCKSP29966 332 aaPredicted RBP17.26■□□□□ 0.35
GINS3-203ENST00000426538 NONOQ15233 471 aaKnown RBP eCLIP17.26■□□□□ 0.35
GINS3-203ENST00000426538 JAKMIP3Q5VZ66 844 aa17.26■□□□□ 0.35
GINS3-203ENST00000426538 CCDC174Q6PII3 467 aa17.26■□□□□ 0.35
GINS3-203ENST00000426538 LDHDQ86WU2 507 aa17.26■□□□□ 0.35
GINS3-203ENST00000426538 C12orf42Q96LP6 360 aa17.26■□□□□ 0.35
GINS3-203ENST00000426538 ELP3Q9H9T3 547 aa17.26■□□□□ 0.35
GINS3-203ENST00000426538 CTDP1Q9Y5B0 961 aaPredicted RBP17.26■□□□□ 0.35
GINS3-203ENST00000426538 PPATQ06203 517 aa17.25■□□□□ 0.35
GINS3-203ENST00000426538 ZNF174Q15697 407 aa17.25■□□□□ 0.35
GINS3-203ENST00000426538 INF2Q27J81 1249 aa17.25■□□□□ 0.35
GINS3-203ENST00000426538 ERO1BQ86YB8 467 aa17.25■□□□□ 0.35
GINS3-203ENST00000426538 ZNF408Q9H9D4 720 aa17.25■□□□□ 0.35
GINS3-203ENST00000426538 FDX1P10109 184 aa17.24■□□□□ 0.35
GINS3-203ENST00000426538 MOB2Q70IA6 237 aa17.24■□□□□ 0.35
GINS3-203ENST00000426538 CCAR1Q8IX12 1150 aaKnown RBP17.24■□□□□ 0.35
GINS3-203ENST00000426538 SH3D19Q5HYK7 790 aa17.24■□□□□ 0.35
GINS3-203ENST00000426538 MCTP2Q6DN12 878 aa17.24■□□□□ 0.35
GINS3-203ENST00000426538 KRI1Q8N9T8 703 aaKnown RBP17.24■□□□□ 0.35
GINS3-203ENST00000426538 ZNF526Q8TF50 670 aaPredicted RBP17.24■□□□□ 0.35
GINS3-203ENST00000426538 PPP1R9AQ9ULJ8 1098 aa17.24■□□□□ 0.35
GINS3-203ENST00000426538 A0A1W2PQ27 194 aa17.23■□□□□ 0.35
GINS3-203ENST00000426538 A0A1W2PQ64 194 aa17.23■□□□□ 0.35
GINS3-203ENST00000426538 A0A1W2PQD8 194 aa17.23■□□□□ 0.35
GINS3-203ENST00000426538 TRAF5O00463 557 aa17.23■□□□□ 0.35
GINS3-203ENST00000426538 ZBED4O75132 1171 aa17.23■□□□□ 0.35
GINS3-203ENST00000426538 MCM7P33993 719 aa17.23■□□□□ 0.35
GINS3-203ENST00000426538 CCDC73Q6ZRK6 1079 aa17.23■□□□□ 0.35
GINS3-203ENST00000426538 TBCKQ8TEA7 893 aa17.23■□□□□ 0.35
GINS3-203ENST00000426538 OTUD5Q96G74 571 aa17.23■□□□□ 0.35
GINS3-203ENST00000426538 CLMNQ96JQ2 1002 aa17.23■□□□□ 0.35
GINS3-203ENST00000426538 TMEM260Q9NX78 707 aa17.23■□□□□ 0.35
GINS3-203ENST00000426538 TMEM63CQ9P1W3 806 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms