RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 ACAD9Q9H845 621 aa20.53■□□□□ 0.88
SLC6A1-202ENST00000425938 GPCPD1Q9NPB8 672 aa20.53■□□□□ 0.88
SLC6A1-202ENST00000425938 HOMER2Q9NSB8 354 aa20.53■□□□□ 0.88
SLC6A1-202ENST00000425938 ZSWIM5Q9P217 1185 aa20.53■□□□□ 0.88
SLC6A1-202ENST00000425938 FRMPD2Q68DX3 1309 aaPredicted RBP20.53■□□□□ 0.88
SLC6A1-202ENST00000425938 SYDE2Q5VT97 1194 aa20.52■□□□□ 0.88
SLC6A1-202ENST00000425938 TTBK2Q6IQ55 1244 aa20.52■□□□□ 0.88
SLC6A1-202ENST00000425938 BTNL9Q6UXG8 535 aa20.52■□□□□ 0.88
SLC6A1-202ENST00000425938 KIAA1211Q6ZU35 1233 aa20.52■□□□□ 0.88
SLC6A1-202ENST00000425938 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.52■□□□□ 0.88
SLC6A1-202ENST00000425938 TRPV1Q8NER1 839 aa20.52■□□□□ 0.88
SLC6A1-202ENST00000425938 AGBL1Q96MI9 1066 aa20.52■□□□□ 0.88
SLC6A1-202ENST00000425938 TINF2Q9BSI4 451 aa20.52■□□□□ 0.88
SLC6A1-202ENST00000425938 KAT14Q9H8E8 782 aa20.52■□□□□ 0.88
SLC6A1-202ENST00000425938 RNF146Q9NTX7 359 aa20.52■□□□□ 0.88
SLC6A1-202ENST00000425938 NRBP1Q9UHY1 535 aa20.52■□□□□ 0.88
SLC6A1-202ENST00000425938 SLC16A2P36021 539 aa20.51■□□□□ 0.87
SLC6A1-202ENST00000425938 ZNF543Q08ER8 600 aa20.51■□□□□ 0.87
SLC6A1-202ENST00000425938 CHRDL2Q6WN34 429 aa20.51■□□□□ 0.87
SLC6A1-202ENST00000425938 MSL3Q8N5Y2 521 aaKnown RBP20.51■□□□□ 0.87
SLC6A1-202ENST00000425938 PNMA1Q8ND90 353 aa20.51■□□□□ 0.87
SLC6A1-202ENST00000425938 ANKS1AQ92625 1134 aa20.51■□□□□ 0.87
SLC6A1-202ENST00000425938 MCM3APO60318 1980 aa20.51■□□□□ 0.87
SLC6A1-202ENST00000425938 ZNF536O15090 1300 aa20.51■□□□□ 0.87
SLC6A1-202ENST00000425938 TNKSO95271 1327 aa20.51■□□□□ 0.87
SLC6A1-202ENST00000425938 DNAJC25-GNG10A0A024R161 153 aa20.5■□□□□ 0.87
SLC6A1-202ENST00000425938 SEPT4O43236 478 aa20.5■□□□□ 0.87
SLC6A1-202ENST00000425938 SNHG28P0DPA3 235 aa20.5■□□□□ 0.87
SLC6A1-202ENST00000425938 ALAS1P13196 640 aa20.5■□□□□ 0.87
SLC6A1-202ENST00000425938 SNAP25P60880 206 aa20.5■□□□□ 0.87
SLC6A1-202ENST00000425938 BMP2KLQ5H9B9 411 aa20.5■□□□□ 0.87
SLC6A1-202ENST00000425938 GPATCH4Q5T3I0 446 aaKnown RBP20.5■□□□□ 0.87
SLC6A1-202ENST00000425938 ENAHQ8N8S7 591 aaPredicted RBP20.5■□□□□ 0.87
SLC6A1-202ENST00000425938 TRERF1Q96PN7 1200 aa20.5■□□□□ 0.87
SLC6A1-202ENST00000425938 RANBP17Q9H2T7 1088 aaKnown RBP20.5■□□□□ 0.87
SLC6A1-202ENST00000425938 CCPG1Q9ULG6 757 aa20.5■□□□□ 0.87
SLC6A1-202ENST00000425938 CNPY2Q9Y2B0 182 aa20.5■□□□□ 0.87
SLC6A1-202ENST00000425938 ICAM1P05362 532 aa20.49■□□□□ 0.87
SLC6A1-202ENST00000425938 CYP21A2P08686 494 aa20.49■□□□□ 0.87
SLC6A1-202ENST00000425938 COL6A1P12109 1028 aa20.49■□□□□ 0.87
SLC6A1-202ENST00000425938 PRAMEF19Q5SWL8 479 aa20.49■□□□□ 0.87
SLC6A1-202ENST00000425938 ZNF467Q7Z7K2 595 aaPredicted RBP20.49■□□□□ 0.87
SLC6A1-202ENST00000425938 RALYLQ86SE5 291 aaKnown RBP20.49■□□□□ 0.87
SLC6A1-202ENST00000425938 PNMA2Q9UL42 364 aa20.49■□□□□ 0.87
SLC6A1-202ENST00000425938 ALPK3Q96L96 1907 aa20.49■□□□□ 0.87
SLC6A1-202ENST00000425938 IFIT1BQ5T764 474 aaKnown RBP20.48■□□□□ 0.87
SLC6A1-202ENST00000425938 MAP4K1Q92918 833 aa20.48■□□□□ 0.87
SLC6A1-202ENST00000425938 MYH6P13533 1939 aa20.48■□□□□ 0.87
SLC6A1-202ENST00000425938 PFASO15067 1338 aa20.48■□□□□ 0.87
SLC6A1-202ENST00000425938 SYNGAP1Q96PV0 1343 aa20.48■□□□□ 0.87
SLC6A1-202ENST00000425938 POTEB2H3BUK9 544 aa20.47■□□□□ 0.87
SLC6A1-202ENST00000425938 MAMDC4Q6UXC1 1216 aa20.47■□□□□ 0.87
SLC6A1-202ENST00000425938 SKAP1Q86WV1 359 aa20.47■□□□□ 0.87
SLC6A1-202ENST00000425938 C7orf61Q8IZ16 206 aa20.47■□□□□ 0.87
SLC6A1-202ENST00000425938 ARRDC4Q8NCT1 418 aa20.47■□□□□ 0.87
SLC6A1-202ENST00000425938 NCOA7Q8NI08 942 aa20.47■□□□□ 0.87
SLC6A1-202ENST00000425938 ESYT1Q9BSJ8 1104 aa20.47■□□□□ 0.87
SLC6A1-202ENST00000425938 A1CFQ9NQ94 594 aaKnown RBP20.47■□□□□ 0.87
SLC6A1-202ENST00000425938 RBM27Q9P2N5 1060 aaKnown RBP20.47■□□□□ 0.87
SLC6A1-202ENST00000425938 RBM8AQ9Y5S9 174 aaKnown RBP20.47■□□□□ 0.87
SLC6A1-202ENST00000425938 GOLGA8HP0CJ92 632 aa20.46■□□□□ 0.87
SLC6A1-202ENST00000425938 FXR1P51114 621 aaKnown RBP eCLIP20.46■□□□□ 0.87
SLC6A1-202ENST00000425938 ASPRV1Q53RT3 343 aa20.46■□□□□ 0.87
SLC6A1-202ENST00000425938 ANO1Q5XXA6 986 aa20.46■□□□□ 0.87
SLC6A1-202ENST00000425938 PRO3102Q9H379 93 aa20.46■□□□□ 0.87
SLC6A1-202ENST00000425938 ERICH2A1L162 156 aa20.45■□□□□ 0.86
SLC6A1-202ENST00000425938 E7EWF7 191 aa20.45■□□□□ 0.86
SLC6A1-202ENST00000425938 DNM1LO00429 736 aa20.45■□□□□ 0.86
SLC6A1-202ENST00000425938 PARP1P09874 1014 aaKnown RBP20.45■□□□□ 0.86
SLC6A1-202ENST00000425938 RARBP10826 455 aa20.45■□□□□ 0.86
SLC6A1-202ENST00000425938 AKR1A1P14550 325 aa20.45■□□□□ 0.86
SLC6A1-202ENST00000425938 SART3Q15020 963 aaKnown RBP20.45■□□□□ 0.86
SLC6A1-202ENST00000425938 CASC1Q6TDU7 716 aa20.45■□□□□ 0.86
SLC6A1-202ENST00000425938 CYB5R4Q7L1T6 521 aa20.45■□□□□ 0.86
SLC6A1-202ENST00000425938 RANBP2P49792 3224 aaKnown RBP20.45■□□□□ 0.86
SLC6A1-202ENST00000425938 KBTBD13C9JR72 458 aa20.44■□□□□ 0.86
SLC6A1-202ENST00000425938 MYCNP04198 464 aaPredicted RBP20.44■□□□□ 0.86
SLC6A1-202ENST00000425938 ZNF865P0CJ78 1059 aaPredicted RBP20.44■□□□□ 0.86
SLC6A1-202ENST00000425938 SEC23AQ15436 765 aa20.44■□□□□ 0.86
SLC6A1-202ENST00000425938 MUM1L1Q5H9M0 696 aa20.44■□□□□ 0.86
SLC6A1-202ENST00000425938 NSMFQ6X4W1 530 aa20.44■□□□□ 0.86
SLC6A1-202ENST00000425938 FAM133AQ8N9E0 248 aa20.44■□□□□ 0.86
SLC6A1-202ENST00000425938 ANO2Q9NQ90 1003 aa20.44■□□□□ 0.86
SLC6A1-202ENST00000425938 ZHX1Q9UKY1 873 aaPredicted RBP20.44■□□□□ 0.86
SLC6A1-202ENST00000425938 IFIT3O14879 490 aaKnown RBP20.43■□□□□ 0.86
SLC6A1-202ENST00000425938 SNAI1O95863 264 aaPredicted RBP20.43■□□□□ 0.86
SLC6A1-202ENST00000425938 TAL1P17542 331 aaPredicted RBP20.43■□□□□ 0.86
SLC6A1-202ENST00000425938 CNTN2Q02246 1040 aa20.43■□□□□ 0.86
SLC6A1-202ENST00000425938 GJC2Q5T442 439 aaPredicted RBP20.43■□□□□ 0.86
SLC6A1-202ENST00000425938 ARMCX2Q7L311 632 aa20.43■□□□□ 0.86
SLC6A1-202ENST00000425938 FGD4Q96M96 766 aa20.43■□□□□ 0.86
SLC6A1-202ENST00000425938 SENP6Q9GZR1 1112 aaPredicted RBP20.43■□□□□ 0.86
SLC6A1-202ENST00000425938 UBA5Q9GZZ9 404 aa20.43■□□□□ 0.86
SLC6A1-202ENST00000425938 LSG1Q9H089 658 aaKnown RBP20.43■□□□□ 0.86
SLC6A1-202ENST00000425938 ABHD16BQ9H3Z7 469 aa20.43■□□□□ 0.86
SLC6A1-202ENST00000425938 XPNPEP3Q9NQH7 507 aa20.43■□□□□ 0.86
SLC6A1-202ENST00000425938 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.43■□□□□ 0.86
SLC6A1-202ENST00000425938 CYP39A1Q9NYL5 469 aa20.43■□□□□ 0.86
SLC6A1-202ENST00000425938 WDR19Q8NEZ3 1342 aa20.43■□□□□ 0.86
SLC6A1-202ENST00000425938 TRIOBPQ9H2D6 2365 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms