RNA–Protein interactions for RNA: ENST00000425430.5

HDAC11-210, Transcript of histone deacetylase 11, humanhuman

TSL 2

Gene HDAC11, Length 1,021 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-210ENST00000425430 C6orf222P0C671 652 aaPredicted RBP18.11■□□□□ 0.49
HDAC11-210ENST00000425430 CPXCR1Q8N123 301 aa18.11■□□□□ 0.49
HDAC11-210ENST00000425430 MSL3Q8N5Y2 521 aaKnown RBP18.11■□□□□ 0.49
HDAC11-210ENST00000425430 USP38Q8NB14 1042 aa18.11■□□□□ 0.49
HDAC11-210ENST00000425430 TIFAQ96CG3 184 aa18.11■□□□□ 0.49
HDAC11-210ENST00000425430 GLT1D1Q96MS3 346 aa18.11■□□□□ 0.49
HDAC11-210ENST00000425430 TOX2Q96NM4 488 aa18.11■□□□□ 0.49
HDAC11-210ENST00000425430 INCENPQ9NQS7 918 aa18.11■□□□□ 0.49
HDAC11-210ENST00000425430 PRDM6Q9NQX0 595 aa18.11■□□□□ 0.49
HDAC11-210ENST00000425430 MYH4Q9Y623 1939 aa18.11■□□□□ 0.49
HDAC11-210ENST00000425430 MCM3APO60318 1980 aa18.11■□□□□ 0.49
HDAC11-210ENST00000425430 MROH7Q68CQ1 1323 aa18.1■□□□□ 0.49
HDAC11-210ENST00000425430 SNAI1O95863 264 aaPredicted RBP18.1■□□□□ 0.49
HDAC11-210ENST00000425430 NDUFB10O96000 172 aa18.1■□□□□ 0.49
HDAC11-210ENST00000425430 TIMP1P01033 207 aa18.1■□□□□ 0.49
HDAC11-210ENST00000425430 SDSP20132 328 aa18.1■□□□□ 0.49
HDAC11-210ENST00000425430 IRX5P78411 483 aaPredicted RBP18.1■□□□□ 0.49
HDAC11-210ENST00000425430 KLHDC9Q8NEP7 349 aa18.1■□□□□ 0.49
HDAC11-210ENST00000425430 VTI1AQ96AJ9 217 aa18.1■□□□□ 0.49
HDAC11-210ENST00000425430 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.1■□□□□ 0.491e-7■■■□□ 15.1
HDAC11-210ENST00000425430 NAPBQ9H115 298 aa18.1■□□□□ 0.49
HDAC11-210ENST00000425430 ZNF576Q9H609 170 aa18.1■□□□□ 0.49
HDAC11-210ENST00000425430 MKNK2Q9HBH9 465 aa18.1■□□□□ 0.49
HDAC11-210ENST00000425430 HELLSQ9NRZ9 838 aa18.1■□□□□ 0.49
HDAC11-210ENST00000425430 TBX21Q9UL17 535 aa18.1■□□□□ 0.49
HDAC11-210ENST00000425430 RIPK3Q9Y572 518 aa18.1■□□□□ 0.49
HDAC11-210ENST00000425430 DUSP11O75319 330 aaKnown RBP18.09■□□□□ 0.49
HDAC11-210ENST00000425430 GSPT1P15170 499 aaKnown RBP18.09■□□□□ 0.49
HDAC11-210ENST00000425430 PPARAQ07869 468 aa18.09■□□□□ 0.49
HDAC11-210ENST00000425430 PPIGQ13427 754 aaKnown RBP eCLIP18.09■□□□□ 0.492e-6■■■■■ 30.1
HDAC11-210ENST00000425430 KIFC2Q96AC6 838 aa18.09■□□□□ 0.49
HDAC11-210ENST00000425430 SPC25Q9HBM1 224 aa18.09■□□□□ 0.49
HDAC11-210ENST00000425430 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.09■□□□□ 0.49
HDAC11-210ENST00000425430 DNAJC25-GNG10A0A024R161 153 aa18.08■□□□□ 0.48
HDAC11-210ENST00000425430 F5H6K3 240 aa18.08■□□□□ 0.48
HDAC11-210ENST00000425430 ZBED4O75132 1171 aa18.08■□□□□ 0.48
HDAC11-210ENST00000425430 ASGR1P07306 291 aa18.08■□□□□ 0.48
HDAC11-210ENST00000425430 CTDSPL2Q05D32 466 aa18.08■□□□□ 0.48
HDAC11-210ENST00000425430 KLRC3Q07444 240 aa18.08■□□□□ 0.48
HDAC11-210ENST00000425430 ACVR2BQ13705 512 aa18.08■□□□□ 0.48
HDAC11-210ENST00000425430 MCMDC2Q4G0Z9 681 aa18.08■□□□□ 0.48
HDAC11-210ENST00000425430 TJAP1Q5JTD0 557 aa18.08■□□□□ 0.48
HDAC11-210ENST00000425430 CCSAPQ6IQ19 270 aaPredicted RBP18.08■□□□□ 0.48
HDAC11-210ENST00000425430 MFSD5Q6N075 450 aa18.08■□□□□ 0.48
HDAC11-210ENST00000425430 CCDC174Q6PII3 467 aa18.08■□□□□ 0.48
HDAC11-210ENST00000425430 MAMDC4Q6UXC1 1216 aa18.08■□□□□ 0.48
HDAC11-210ENST00000425430 ANKRD35Q8N283 1001 aa18.08■□□□□ 0.48
HDAC11-210ENST00000425430 PPM1EQ8WY54 764 aa18.08■□□□□ 0.48
HDAC11-210ENST00000425430 PPP1R12CQ9BZL4 782 aa18.08■□□□□ 0.48
HDAC11-210ENST00000425430 IL25Q9H293 177 aa18.08■□□□□ 0.48
HDAC11-210ENST00000425430 RAVER2Q9HCJ3 691 aaKnown RBP18.08■□□□□ 0.48
HDAC11-210ENST00000425430 ELP1O95163 1332 aa18.07■□□□□ 0.48
HDAC11-210ENST00000425430 IGKV6D-41A0A0C4DH26 115 aa18.07■□□□□ 0.48
HDAC11-210ENST00000425430 A0A0U1RQG5 324 aaPredicted RBP18.07■□□□□ 0.48
HDAC11-210ENST00000425430 GRXCR1A8MXD5 290 aa18.07■□□□□ 0.48
HDAC11-210ENST00000425430 ADCY6O43306 1168 aa18.07■□□□□ 0.48
HDAC11-210ENST00000425430 CST5P28325 142 aaPredicted RBP18.07■□□□□ 0.48
HDAC11-210ENST00000425430 PBX2P40425 430 aa18.07■□□□□ 0.48
HDAC11-210ENST00000425430 ZNF467Q7Z7K2 595 aaPredicted RBP18.07■□□□□ 0.48
HDAC11-210ENST00000425430 PRPF38AQ8NAV1 312 aaKnown RBP18.07■□□□□ 0.48
HDAC11-210ENST00000425430 PCSK9Q8NBP7 692 aaKnown RBP18.07■□□□□ 0.48
HDAC11-210ENST00000425430 GAS2L1Q99501 681 aaPredicted RBP18.07■□□□□ 0.48
HDAC11-210ENST00000425430 NACAP1Q9BZK3 213 aa18.07■□□□□ 0.48
HDAC11-210ENST00000425430 NYAP2Q9P242 653 aa18.07■□□□□ 0.48
HDAC11-210ENST00000425430 CLIP2Q9UDT6 1046 aa18.07■□□□□ 0.48
HDAC11-210ENST00000425430 ISY1Q9ULR0 285 aaKnown RBP18.07■□□□□ 0.48
HDAC11-210ENST00000425430 TTC28Q96AY4 2481 aa18.07■□□□□ 0.48
HDAC11-210ENST00000425430 HSPD1P10809 573 aaKnown RBP18.06■□□□□ 0.48
HDAC11-210ENST00000425430 CSF2RAP15509 400 aa18.06■□□□□ 0.48
HDAC11-210ENST00000425430 CCDC144BQ3MJ40 725 aa18.06■□□□□ 0.48
HDAC11-210ENST00000425430 GNASQ5JWF2 1037 aa18.06■□□□□ 0.48
HDAC11-210ENST00000425430 TMEM240Q5SV17 173 aa18.06■□□□□ 0.48
HDAC11-210ENST00000425430 ARMCX2Q7L311 632 aa18.06■□□□□ 0.48
HDAC11-210ENST00000425430 SKAP1Q86WV1 359 aa18.06■□□□□ 0.48
HDAC11-210ENST00000425430 LRRC47Q8N1G4 583 aaKnown RBP18.06■□□□□ 0.48
HDAC11-210ENST00000425430 TMEM199Q8N511 208 aa18.06■□□□□ 0.48
HDAC11-210ENST00000425430 PBX4Q9BYU1 374 aa18.06■□□□□ 0.48
HDAC11-210ENST00000425430 HOMER2Q9NSB8 354 aa18.06■□□□□ 0.48
HDAC11-210ENST00000425430 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.06■□□□□ 0.48
HDAC11-210ENST00000425430 CCDC171Q6TFL3 1326 aa18.05■□□□□ 0.48
HDAC11-210ENST00000425430 ARVCFO00192 962 aa18.05■□□□□ 0.48
HDAC11-210ENST00000425430 ATP2A1O14983 1001 aa18.05■□□□□ 0.48
HDAC11-210ENST00000425430 TLR3O15455 904 aaKnown RBP18.05■□□□□ 0.48
HDAC11-210ENST00000425430 FGAP02671 866 aa18.05■□□□□ 0.48
HDAC11-210ENST00000425430 ACRP10323 421 aa18.05■□□□□ 0.48
HDAC11-210ENST00000425430 TTC22Q5TAA0 569 aa18.05■□□□□ 0.48
HDAC11-210ENST00000425430 CWC27Q6UX04 472 aaKnown RBP18.05■□□□□ 0.48
HDAC11-210ENST00000425430 FGD4Q96M96 766 aa18.05■□□□□ 0.48
HDAC11-210ENST00000425430 UPF3AQ9H1J1 476 aaKnown RBP18.05■□□□□ 0.48
HDAC11-210ENST00000425430 ABHD16BQ9H3Z7 469 aa18.05■□□□□ 0.48
HDAC11-210ENST00000425430 PRDM12Q9H4Q4 367 aa18.05■□□□□ 0.48
HDAC11-210ENST00000425430 SLC38A10Q9HBR0 1119 aa18.05■□□□□ 0.48
HDAC11-210ENST00000425430 FBXO40Q9UH90 709 aa18.05■□□□□ 0.48
HDAC11-210ENST00000425430 CDK7P50613 346 aa18.04■□□□□ 0.48
HDAC11-210ENST00000425430 GJA9P57773 515 aa18.04■□□□□ 0.48
HDAC11-210ENST00000425430 ALX1Q15699 326 aa18.04■□□□□ 0.48
HDAC11-210ENST00000425430 PSRC1Q6PGN9 363 aaPredicted RBP18.04■□□□□ 0.48
HDAC11-210ENST00000425430 ZNF365Q70YC5 407 aa18.04■□□□□ 0.48
HDAC11-210ENST00000425430 NOL8Q76FK4 1167 aaKnown RBP18.04■□□□□ 0.48
HDAC11-210ENST00000425430 C16orf59Q7L2K0 433 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms