RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 SLC38A10Q9HBR0 1119 aa14.58□□□□□ -0.08
HLA-DQB3-203ENST00000425319 MTMR4Q9NYA4 1195 aa14.58□□□□□ -0.08
HLA-DQB3-203ENST00000425319 ZNF236Q9UL36 1845 aa14.57□□□□□ -0.08
HLA-DQB3-203ENST00000425319 GSG1L2A8MUP6 293 aa14.57□□□□□ -0.08
HLA-DQB3-203ENST00000425319 TMEM232C9JQI7 657 aa14.57□□□□□ -0.08
HLA-DQB3-203ENST00000425319 ITGB8P26012 769 aa14.57□□□□□ -0.08
HLA-DQB3-203ENST00000425319 SLC1A4P43007 532 aa14.57□□□□□ -0.08
HLA-DQB3-203ENST00000425319 CDK7P50613 346 aa14.57□□□□□ -0.08
HLA-DQB3-203ENST00000425319 GRIN2CQ14957 1233 aa14.57□□□□□ -0.08
HLA-DQB3-203ENST00000425319 BRDTQ58F21 947 aaPredicted RBP14.57□□□□□ -0.08
HLA-DQB3-203ENST00000425319 IQSEC1Q6DN90 963 aa14.57□□□□□ -0.08
HLA-DQB3-203ENST00000425319 SIRT2Q8IXJ6 389 aa14.57□□□□□ -0.08
HLA-DQB3-203ENST00000425319 ATXN2LQ8WWM7 1075 aaKnown RBP14.57□□□□□ -0.08
HLA-DQB3-203ENST00000425319 PPM1EQ8WY54 764 aa14.57□□□□□ -0.08
HLA-DQB3-203ENST00000425319 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.57□□□□□ -0.08
HLA-DQB3-203ENST00000425319 NAPBQ9H115 298 aa14.57□□□□□ -0.08
HLA-DQB3-203ENST00000425319 PRDM6Q9NQX0 595 aa14.57□□□□□ -0.08
HLA-DQB3-203ENST00000425319 GPHNQ9NQX3 736 aaPredicted RBP14.57□□□□□ -0.08
HLA-DQB3-203ENST00000425319 PNMA2Q9UL42 364 aa14.57□□□□□ -0.08
HLA-DQB3-203ENST00000425319 RIPK3Q9Y572 518 aa14.57□□□□□ -0.08
HLA-DQB3-203ENST00000425319 CDK5RAP2Q96SN8 1893 aa14.57□□□□□ -0.08
HLA-DQB3-203ENST00000425319 B4DLN1 442 aa14.56□□□□□ -0.08
HLA-DQB3-203ENST00000425319 GPAA1O43292 621 aa14.56□□□□□ -0.08
HLA-DQB3-203ENST00000425319 SUPT20HL2P0C7V6 817 aa14.56□□□□□ -0.08
HLA-DQB3-203ENST00000425319 MRPL12P52815 198 aaKnown RBP14.56□□□□□ -0.08
HLA-DQB3-203ENST00000425319 EPHB4P54760 987 aa14.56□□□□□ -0.08
HLA-DQB3-203ENST00000425319 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.56□□□□□ -0.08
HLA-DQB3-203ENST00000425319 CCDC144CPQ8IYA2 1237 aa14.56□□□□□ -0.08
HLA-DQB3-203ENST00000425319 NEDD1Q8NHV4 660 aa14.56□□□□□ -0.08
HLA-DQB3-203ENST00000425319 STAG1Q8WVM7 1258 aa14.56□□□□□ -0.08
HLA-DQB3-203ENST00000425319 PPP1R12CQ9BZL4 782 aa14.56□□□□□ -0.08
HLA-DQB3-203ENST00000425319 UPF3AQ9H1J1 476 aaKnown RBP14.56□□□□□ -0.08
HLA-DQB3-203ENST00000425319 HOMER2Q9NSB8 354 aa14.56□□□□□ -0.08
HLA-DQB3-203ENST00000425319 ADD3Q9UEY8 706 aaKnown RBP14.56□□□□□ -0.08
HLA-DQB3-203ENST00000425319 RCAN3Q9UKA8 241 aa14.56□□□□□ -0.08
HLA-DQB3-203ENST00000425319 RANBP2P49792 3224 aaKnown RBP14.55□□□□□ -0.08
HLA-DQB3-203ENST00000425319 TSPY2A6NKD2 308 aa14.55□□□□□ -0.08
HLA-DQB3-203ENST00000425319 TNFRSF10AO00220 468 aa14.55□□□□□ -0.08
HLA-DQB3-203ENST00000425319 CSF2RAP15509 400 aa14.55□□□□□ -0.08
HLA-DQB3-203ENST00000425319 IGFBP4P22692 258 aa14.55□□□□□ -0.08
HLA-DQB3-203ENST00000425319 TFAP4Q01664 338 aa14.55□□□□□ -0.08
HLA-DQB3-203ENST00000425319 TMEM240Q5SV17 173 aa14.55□□□□□ -0.08
HLA-DQB3-203ENST00000425319 AKNAD1Q5T1N1 836 aa14.55□□□□□ -0.08
HLA-DQB3-203ENST00000425319 CCSAPQ6IQ19 270 aaPredicted RBP14.55□□□□□ -0.08
HLA-DQB3-203ENST00000425319 ZNF365Q70YC5 407 aa14.55□□□□□ -0.08
HLA-DQB3-203ENST00000425319 IFNL3Q8IZI9 196 aa14.55□□□□□ -0.08
HLA-DQB3-203ENST00000425319 LENG1Q96BZ8 264 aaPredicted RBP14.55□□□□□ -0.08
HLA-DQB3-203ENST00000425319 CEP95Q96GE4 821 aa14.55□□□□□ -0.08
HLA-DQB3-203ENST00000425319 TRERF1Q96PN7 1200 aa14.55□□□□□ -0.08
HLA-DQB3-203ENST00000425319 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.55□□□□□ -0.08
HLA-DQB3-203ENST00000425319 IL23AQ9NPF7 189 aa14.55□□□□□ -0.08
HLA-DQB3-203ENST00000425319 TBX21Q9UL17 535 aa14.55□□□□□ -0.08
HLA-DQB3-203ENST00000425319 Q9Y3F1 56 aa14.55□□□□□ -0.08
HLA-DQB3-203ENST00000425319 DYNC1LI2O43237 492 aaPredicted RBP14.54□□□□□ -0.08
HLA-DQB3-203ENST00000425319 PRDM1O75626 825 aa14.54□□□□□ -0.08
HLA-DQB3-203ENST00000425319 ALAS1P13196 640 aa14.54□□□□□ -0.08
HLA-DQB3-203ENST00000425319 ITGA7Q13683 1181 aa14.54□□□□□ -0.08
HLA-DQB3-203ENST00000425319 AAK1Q2M2I8 961 aa14.54□□□□□ -0.08
HLA-DQB3-203ENST00000425319 DIEXFQ68CQ4 756 aaKnown RBP14.54□□□□□ -0.08
HLA-DQB3-203ENST00000425319 RCSD1Q6JBY9 416 aa14.54□□□□□ -0.08
HLA-DQB3-203ENST00000425319 MIER1Q8N108 512 aa14.54□□□□□ -0.08
HLA-DQB3-203ENST00000425319 OSBP2Q969R2 916 aa14.54□□□□□ -0.08
HLA-DQB3-203ENST00000425319 GMCL1Q96IK5 515 aa14.54□□□□□ -0.08
HLA-DQB3-203ENST00000425319 HIPK3Q9H422 1215 aa14.54□□□□□ -0.08
HLA-DQB3-203ENST00000425319 RNF146Q9NTX7 359 aa14.54□□□□□ -0.08
HLA-DQB3-203ENST00000425319 STX8Q9UNK0 236 aa14.54□□□□□ -0.08
HLA-DQB3-203ENST00000425319 NAV1Q8NEY1 1877 aa14.53□□□□□ -0.08
HLA-DQB3-203ENST00000425319 MYO5AQ9Y4I1 1855 aaKnown RBP14.53□□□□□ -0.08
HLA-DQB3-203ENST00000425319 SMARCA5O60264 1052 aaPredicted RBP14.53□□□□□ -0.08
HLA-DQB3-203ENST00000425319 PLA2G6O60733 806 aa14.53□□□□□ -0.08
HLA-DQB3-203ENST00000425319 MRPS5P82675 430 aaKnown RBP14.53□□□□□ -0.08
HLA-DQB3-203ENST00000425319 FSCN1Q16658 493 aaKnown RBP14.53□□□□□ -0.08
HLA-DQB3-203ENST00000425319 TLK2Q86UE8 772 aa14.53□□□□□ -0.08
HLA-DQB3-203ENST00000425319 FAM126BQ8IXS8 530 aa14.53□□□□□ -0.08
HLA-DQB3-203ENST00000425319 LRRC47Q8N1G4 583 aaKnown RBP14.53□□□□□ -0.08
HLA-DQB3-203ENST00000425319 HERVK_113Q902F9 699 aa14.53□□□□□ -0.08
HLA-DQB3-203ENST00000425319 POLR3EQ9NVU0 708 aa14.53□□□□□ -0.08
HLA-DQB3-203ENST00000425319 THEGQ9P2T0 379 aa14.53□□□□□ -0.08
HLA-DQB3-203ENST00000425319 SLC4A7Q9Y6M7 1214 aa14.53□□□□□ -0.08
HLA-DQB3-203ENST00000425319 SZT2Q5T011 3432 aa14.53□□□□□ -0.08
HLA-DQB3-203ENST00000425319 TTC41PQ6P2S7 1318 aa14.52□□□□□ -0.08
HLA-DQB3-203ENST00000425319 RAD50Q92878 1312 aa14.52□□□□□ -0.08
HLA-DQB3-203ENST00000425319 IGKV6D-41A0A0C4DH26 115 aa14.52□□□□□ -0.09
HLA-DQB3-203ENST00000425319 SMIM22K7EJ46 135 aa14.52□□□□□ -0.09
HLA-DQB3-203ENST00000425319 ACRP10323 421 aa14.52□□□□□ -0.09
HLA-DQB3-203ENST00000425319 ACTN1P12814 892 aa14.52□□□□□ -0.09
HLA-DQB3-203ENST00000425319 MCCP23508 829 aa14.52□□□□□ -0.09
HLA-DQB3-203ENST00000425319 NKX3-2P78367 333 aa14.52□□□□□ -0.09
HLA-DQB3-203ENST00000425319 PPARAQ07869 468 aa14.52□□□□□ -0.09
HLA-DQB3-203ENST00000425319 KIAA1211Q6ZU35 1233 aa14.52□□□□□ -0.09
HLA-DQB3-203ENST00000425319 FSD1Q9BTV5 496 aa14.52□□□□□ -0.09
HLA-DQB3-203ENST00000425319 PBX4Q9BYU1 374 aa14.52□□□□□ -0.09
HLA-DQB3-203ENST00000425319 PRDM12Q9H4Q4 367 aa14.52□□□□□ -0.09
HLA-DQB3-203ENST00000425319 DCTPP1Q9H773 170 aa14.52□□□□□ -0.09
HLA-DQB3-203ENST00000425319 ZBBXA8MT70 800 aa14.51□□□□□ -0.09
HLA-DQB3-203ENST00000425319 KIF28PB7ZC32 967 aa14.51□□□□□ -0.09
HLA-DQB3-203ENST00000425319 PFKMP08237 780 aa14.51□□□□□ -0.09
HLA-DQB3-203ENST00000425319 CYP2C18P33260 490 aa14.51□□□□□ -0.09
HLA-DQB3-203ENST00000425319 CPT1AP50416 773 aa14.51□□□□□ -0.09
HLA-DQB3-203ENST00000425319 BEX3Q00994 111 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms