RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 TUBE1Q9UJT0 475 aa30.19■■■□□ 2.42
LDB1-202ENST00000425280 ADCY5O95622 1261 aa30.19■■■□□ 2.42
LDB1-202ENST00000425280 ADCY7P51828 1080 aa30.19■■■□□ 2.42
LDB1-202ENST00000425280 ARL6IP4Q66PJ3 421 aaKnown RBP30.19■■■□□ 2.42
LDB1-202ENST00000425280 BIN2Q9UBW5 565 aaPredicted RBP30.19■■■□□ 2.42
LDB1-202ENST00000425280 SERTAD1Q9UHV2 236 aa30.19■■■□□ 2.42
LDB1-202ENST00000425280 MDM2Q00987 491 aaPredicted RBP30.18■■■□□ 2.42
LDB1-202ENST00000425280 SYNPO2Q9UMS6 1093 aa30.18■■■□□ 2.42
LDB1-202ENST00000425280 ZRSR1Q15695 479 aaKnown RBP30.18■■■□□ 2.42
LDB1-202ENST00000425280 MIGA2Q7L4E1 593 aa30.18■■■□□ 2.42
LDB1-202ENST00000425280 PDILTQ8N807 584 aa30.18■■■□□ 2.42
LDB1-202ENST00000425280 DPF2Q92785 391 aa30.18■■■□□ 2.42
LDB1-202ENST00000425280 NUP88Q99567 741 aaPredicted RBP30.18■■■□□ 2.42
LDB1-202ENST00000425280 ZBTB21Q9ULJ3 1066 aa30.18■■■□□ 2.42
LDB1-202ENST00000425280 BIN1O00499 593 aa30.17■■■□□ 2.42
LDB1-202ENST00000425280 ACTN4O43707 911 aaKnown RBP30.17■■■□□ 2.42
LDB1-202ENST00000425280 JAKMIP3Q5VZ66 844 aa30.17■■■□□ 2.42
LDB1-202ENST00000425280 MICALL2Q8IY33 904 aa30.17■■■□□ 2.42
LDB1-202ENST00000425280 CEP57L1Q8IYX8 460 aa30.17■■■□□ 2.42
LDB1-202ENST00000425280 TMEM260Q9NX78 707 aa30.17■■■□□ 2.42
LDB1-202ENST00000425280 GJA3Q9Y6H8 435 aa30.17■■■□□ 2.42
LDB1-202ENST00000425280 A0A087X0B3 334 aa30.16■■■□□ 2.42
LDB1-202ENST00000425280 FOXN1O15353 648 aa30.16■■■□□ 2.42
LDB1-202ENST00000425280 NLRP12P59046 1061 aa30.16■■■□□ 2.42
LDB1-202ENST00000425280 TNNI2P48788 182 aa30.16■■■□□ 2.42
LDB1-202ENST00000425280 PLCB2Q00722 1185 aa30.16■■■□□ 2.42
LDB1-202ENST00000425280 MAP3K10Q02779 954 aa30.16■■■□□ 2.42
LDB1-202ENST00000425280 DPCR1Q3MIW9 517 aa30.16■■■□□ 2.42
LDB1-202ENST00000425280 RIC8AQ9NPQ8 531 aa30.16■■■□□ 2.42
LDB1-202ENST00000425280 SCAF8Q9UPN6 1271 aaKnown RBP30.16■■■□□ 2.42
LDB1-202ENST00000425280 RASA3Q14644 834 aa30.15■■■□□ 2.42
LDB1-202ENST00000425280 QRICH1Q2TAL8 776 aa30.15■■■□□ 2.42
LDB1-202ENST00000425280 TMEM60Q9H2L4 133 aa30.15■■■□□ 2.42
LDB1-202ENST00000425280 ARHGEF10LQ9HCE6 1279 aa30.15■■■□□ 2.42
LDB1-202ENST00000425280 ECE1P42892 770 aa30.15■■■□□ 2.42
LDB1-202ENST00000425280 CNOT7Q9UIV1 285 aaKnown RBP30.15■■■□□ 2.42
LDB1-202ENST00000425280 HOOK1Q9UJC3 728 aaKnown RBP30.15■■■□□ 2.42
LDB1-202ENST00000425280 SAMD7Q7Z3H4 446 aa30.14■■■□□ 2.42
LDB1-202ENST00000425280 NEK8Q86SG6 692 aa30.14■■■□□ 2.42
LDB1-202ENST00000425280 ACER1Q8TDN7 264 aa30.14■■■□□ 2.42
LDB1-202ENST00000425280 TBCKQ8TEA7 893 aa30.14■■■□□ 2.42
LDB1-202ENST00000425280 NAT10Q9H0A0 1025 aaKnown RBP30.14■■■□□ 2.42
LDB1-202ENST00000425280 ZNF541Q9H0D2 1346 aa30.14■■■□□ 2.41
LDB1-202ENST00000425280 BMP3P12645 472 aa30.13■■■□□ 2.41
LDB1-202ENST00000425280 CDC37Q16543 378 aaPredicted RBP30.13■■■□□ 2.41
LDB1-202ENST00000425280 DHX40Q8IX18 779 aaKnown RBP30.13■■■□□ 2.41
LDB1-202ENST00000425280 TMX2Q9Y320 296 aa30.13■■■□□ 2.41
LDB1-202ENST00000425280 LONP1P36776 959 aaKnown RBP30.13■■■□□ 2.41
LDB1-202ENST00000425280 CAP2P40123 477 aa30.13■■■□□ 2.41
LDB1-202ENST00000425280 POSTNQ15063 836 aa30.13■■■□□ 2.41
LDB1-202ENST00000425280 LETM2Q2VYF4 491 aa30.13■■■□□ 2.41
LDB1-202ENST00000425280 KANK3Q6NY19 840 aa30.13■■■□□ 2.41
LDB1-202ENST00000425280 DHX58Q96C10 678 aa30.13■■■□□ 2.41
LDB1-202ENST00000425280 PCDHA5Q9Y5H7 936 aa30.13■■■□□ 2.41
LDB1-202ENST00000425280 TMEM232C9JQI7 657 aa30.11■■■□□ 2.41
LDB1-202ENST00000425280 LAD1O00515 517 aa30.11■■■□□ 2.41
LDB1-202ENST00000425280 TNFAIP1Q13829 316 aa30.11■■■□□ 2.41
LDB1-202ENST00000425280 TBC1D10BQ4KMP7 808 aaPredicted RBP30.11■■■□□ 2.41
LDB1-202ENST00000425280 CUL5Q93034 780 aa30.11■■■□□ 2.41
LDB1-202ENST00000425280 TEPSINQ96N21 525 aa30.11■■■□□ 2.41
LDB1-202ENST00000425280 FRMD4AQ9P2Q2 1039 aaPredicted RBP30.11■■■□□ 2.41
LDB1-202ENST00000425280 CCNT1O60563 726 aaKnown RBP30.11■■■□□ 2.41
LDB1-202ENST00000425280 PRR29P0C7W0 189 aa30.11■■■□□ 2.41
LDB1-202ENST00000425280 CLK2P49760 499 aaKnown RBP30.11■■■□□ 2.41
LDB1-202ENST00000425280 HS1BP3Q53T59 392 aa30.11■■■□□ 2.41
LDB1-202ENST00000425280 SYDE2Q5VT97 1194 aa30.11■■■□□ 2.41
LDB1-202ENST00000425280 ISM2Q6H9L7 571 aa30.11■■■□□ 2.41
LDB1-202ENST00000425280 BTNL9Q6UXG8 535 aa30.11■■■□□ 2.41
LDB1-202ENST00000425280 SPICE1Q8N0Z3 855 aa30.11■■■□□ 2.41
LDB1-202ENST00000425280 ASTN2O75129 1339 aaPredicted RBP30.11■■■□□ 2.41
LDB1-202ENST00000425280 UBE2SQ16763 222 aa30.1■■■□□ 2.41
LDB1-202ENST00000425280 KIAA1755Q5JYT7 1200 aa30.1■■■□□ 2.41
LDB1-202ENST00000425280 DTHD1Q6ZMT9 781 aa30.1■■■□□ 2.41
LDB1-202ENST00000425280 GRAMD1CQ8IYS0 662 aa30.1■■■□□ 2.41
LDB1-202ENST00000425280 BPIFA3Q9BQP9 254 aa30.1■■■□□ 2.41
LDB1-202ENST00000425280 SPON1Q9HCB6 807 aa30.1■■■□□ 2.41
LDB1-202ENST00000425280 GOLGA6L19H0YKK7 550 aa30.1■■■□□ 2.41
LDB1-202ENST00000425280 SLFN14P0C7P3 912 aa30.1■■■□□ 2.41
LDB1-202ENST00000425280 PRPHP41219 470 aa30.1■■■□□ 2.41
LDB1-202ENST00000425280 PCDHA1Q9Y5I3 950 aa30.1■■■□□ 2.41
LDB1-202ENST00000425280 MRPL12P52815 198 aaKnown RBP30.09■■■□□ 2.41
LDB1-202ENST00000425280 IKQ13123 557 aaPredicted RBP30.09■■■□□ 2.41
LDB1-202ENST00000425280 PSTPIP2Q9H939 334 aa30.09■■■□□ 2.41
LDB1-202ENST00000425280 GOPCQ9HD26 462 aa30.09■■■□□ 2.41
LDB1-202ENST00000425280 BECN2A8MW95 431 aa30.08■■■□□ 2.41
LDB1-202ENST00000425280 AOPEPQ8N6M6 819 aa30.08■■■□□ 2.41
LDB1-202ENST00000425280 SNAP25P60880 206 aa30.08■■■□□ 2.41
LDB1-202ENST00000425280 ORC2Q13416 577 aaPredicted RBP30.08■■■□□ 2.41
LDB1-202ENST00000425280 KIF4BQ2VIQ3 1234 aa30.08■■■□□ 2.41
LDB1-202ENST00000425280 NT5DC1Q5TFE4 455 aa30.08■■■□□ 2.41
LDB1-202ENST00000425280 HACL1Q9UJ83 578 aa30.08■■■□□ 2.41
LDB1-202ENST00000425280 PHF20L1A8MW92 1017 aa30.07■■■□□ 2.4
LDB1-202ENST00000425280 EDIL3O43854 480 aa30.07■■■□□ 2.4
LDB1-202ENST00000425280 NEMFO60524 1076 aa30.07■■■□□ 2.4
LDB1-202ENST00000425280 E2F4Q16254 413 aa30.07■■■□□ 2.4
LDB1-202ENST00000425280 SH3RF1Q7Z6J0 888 aa30.07■■■□□ 2.4
LDB1-202ENST00000425280 OR52Z1P0C646 297 aa30.07■■■□□ 2.4
LDB1-202ENST00000425280 SARSP49591 514 aaKnown RBP30.07■■■□□ 2.4
LDB1-202ENST00000425280 CCDC39Q9UFE4 941 aa30.07■■■□□ 2.4
LDB1-202ENST00000425280 ARHGAP27Q6ZUM4 889 aa30.06■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 200.4 ms