RNA–Protein interactions for RNA: ENST00000424766.5

PMS1-211, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 3

Gene PMS1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-211ENST00000424766 RABEP1Q15276 862 aa23.96■■□□□ 1.43
PMS1-211ENST00000424766 RTN1Q16799 776 aa23.96■■□□□ 1.43
PMS1-211ENST00000424766 RAB11FIP4Q86YS3 637 aa23.96■■□□□ 1.43
PMS1-211ENST00000424766 CCDC144CPQ8IYA2 1237 aa23.96■■□□□ 1.43
PMS1-211ENST00000424766 MTMR8Q96EF0 704 aa23.96■■□□□ 1.43
PMS1-211ENST00000424766 SPZ1Q9BXG8 430 aa23.96■■□□□ 1.43
PMS1-211ENST00000424766 MROH8Q9H579 483 aa23.96■■□□□ 1.43
PMS1-211ENST00000424766 VAT1LQ9HCJ6 419 aa23.96■■□□□ 1.43
PMS1-211ENST00000424766 SMCHD1A6NHR9 2005 aa23.96■■□□□ 1.43
PMS1-211ENST00000424766 ZNFX1Q9P2E3 1918 aaKnown RBP23.96■■□□□ 1.43
PMS1-211ENST00000424766 CCDC196A0A1B0GTZ2 297 aa23.95■■□□□ 1.42
PMS1-211ENST00000424766 DHX16O60231 1041 aaKnown RBP23.95■■□□□ 1.42
PMS1-211ENST00000424766 FMNL1O95466 1100 aaPredicted RBP23.95■■□□□ 1.42
PMS1-211ENST00000424766 HOXD10P28358 340 aa23.95■■□□□ 1.42
PMS1-211ENST00000424766 CTGFP29279 349 aa23.95■■□□□ 1.42
PMS1-211ENST00000424766 AK2P54819 239 aa23.95■■□□□ 1.42
PMS1-211ENST00000424766 SNAP25P60880 206 aa23.95■■□□□ 1.42
PMS1-211ENST00000424766 SNRNP48Q6IEG0 339 aaKnown RBP23.95■■□□□ 1.42
PMS1-211ENST00000424766 NBPF11Q86T75 865 aa23.95■■□□□ 1.42
PMS1-211ENST00000424766 TRIM47Q96LD4 638 aa23.95■■□□□ 1.42
PMS1-211ENST00000424766 ARHGAP39Q9C0H5 1083 aa23.95■■□□□ 1.42
PMS1-211ENST00000424766 HPS5Q9UPZ3 1129 aa23.95■■□□□ 1.42
PMS1-211ENST00000424766 ZSWIM8A7E2V4 1837 aa23.95■■□□□ 1.42
PMS1-211ENST00000424766 NID2Q14112 1375 aa23.94■■□□□ 1.42
PMS1-211ENST00000424766 ICAM1P05362 532 aa23.94■■□□□ 1.42
PMS1-211ENST00000424766 ERCC3P19447 782 aa23.94■■□□□ 1.42
PMS1-211ENST00000424766 METAP2P50579 478 aaKnown RBP eCLIP23.94■■□□□ 1.42
PMS1-211ENST00000424766 CAP1Q01518 475 aa23.94■■□□□ 1.42
PMS1-211ENST00000424766 SLC35G1Q2M3R5 365 aa23.94■■□□□ 1.42
PMS1-211ENST00000424766 TKFCQ3LXA3 575 aa23.94■■□□□ 1.42
PMS1-211ENST00000424766 CCDC174Q6PII3 467 aa23.94■■□□□ 1.42
PMS1-211ENST00000424766 COA7Q96BR5 231 aa23.94■■□□□ 1.42
PMS1-211ENST00000424766 EFCC1Q9HA90 598 aa23.94■■□□□ 1.42
PMS1-211ENST00000424766 FAM217BQ9NTX9 383 aaPredicted RBP23.94■■□□□ 1.42
PMS1-211ENST00000424766 TNPO2O14787 897 aaKnown RBP23.93■■□□□ 1.42
PMS1-211ENST00000424766 CYTH3O43739 400 aa23.93■■□□□ 1.42
PMS1-211ENST00000424766 STRNO43815 780 aa23.93■■□□□ 1.42
PMS1-211ENST00000424766 CDC37Q16543 378 aaPredicted RBP23.93■■□□□ 1.42
PMS1-211ENST00000424766 TMTC3Q6ZXV5 915 aa23.93■■□□□ 1.42
PMS1-211ENST00000424766 PLEKHH3Q7Z736 793 aa23.93■■□□□ 1.42
PMS1-211ENST00000424766 NCAPG2Q86XI2 1143 aa23.93■■□□□ 1.42
PMS1-211ENST00000424766 SRBD1Q8N5C6 995 aaKnown RBP23.93■■□□□ 1.42
PMS1-211ENST00000424766 AGBL1Q96MI9 1066 aa23.93■■□□□ 1.42
PMS1-211ENST00000424766 LARP6Q9BRS8 491 aaKnown RBP23.93■■□□□ 1.42
PMS1-211ENST00000424766 RIPK3Q9Y572 518 aa23.93■■□□□ 1.42
PMS1-211ENST00000424766 ZBTB5O15062 677 aa23.92■■□□□ 1.42
PMS1-211ENST00000424766 PLEKHA8P1O95397 391 aa23.92■■□□□ 1.42
PMS1-211ENST00000424766 CDC27P30260 824 aa23.92■■□□□ 1.42
PMS1-211ENST00000424766 GPR142Q7Z601 462 aa23.92■■□□□ 1.42
PMS1-211ENST00000424766 CHST13Q8NET6 341 aa23.92■■□□□ 1.42
PMS1-211ENST00000424766 CWC22Q9HCG8 908 aaKnown RBP23.92■■□□□ 1.42
PMS1-211ENST00000424766 CCPG1Q9ULG6 757 aa23.92■■□□□ 1.42
PMS1-211ENST00000424766 ECM2O94769 699 aaPredicted RBP23.91■■□□□ 1.42
PMS1-211ENST00000424766 SLC4A3P48751 1232 aa23.91■■□□□ 1.42
PMS1-211ENST00000424766 PRMT2P55345 433 aa23.91■■□□□ 1.42
PMS1-211ENST00000424766 QRICH1Q2TAL8 776 aa23.91■■□□□ 1.42
PMS1-211ENST00000424766 WDR78Q5VTH9 848 aa23.91■■□□□ 1.42
PMS1-211ENST00000424766 OTOP1Q7RTM1 612 aa23.91■■□□□ 1.42
PMS1-211ENST00000424766 CTU1Q7Z7A3 348 aaKnown RBP23.91■■□□□ 1.42
PMS1-211ENST00000424766 FBXO40Q9UH90 709 aa23.91■■□□□ 1.42
PMS1-211ENST00000424766 TPCN1Q9ULQ1 816 aa23.91■■□□□ 1.42
PMS1-211ENST00000424766 TRIM17Q9Y577 477 aa23.91■■□□□ 1.42
PMS1-211ENST00000424766 IVNS1ABPQ9Y6Y0 642 aa23.91■■□□□ 1.42
PMS1-211ENST00000424766 PLXNB2O15031 1838 aa23.91■■□□□ 1.42
PMS1-211ENST00000424766 PNMA6FA0A0J9YX94 578 aa23.9■■□□□ 1.42
PMS1-211ENST00000424766 PTPREP23469 700 aa23.9■■□□□ 1.42
PMS1-211ENST00000424766 ADD1P35611 737 aaKnown RBP23.9■■□□□ 1.42
PMS1-211ENST00000424766 TRAF1Q13077 416 aa23.9■■□□□ 1.42
PMS1-211ENST00000424766 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.9■■□□□ 1.42
PMS1-211ENST00000424766 FBXO11Q86XK2 927 aa23.9■■□□□ 1.42
PMS1-211ENST00000424766 ABRAQ8N0Z2 381 aa23.9■■□□□ 1.42
PMS1-211ENST00000424766 RRP36Q96EU6 259 aaKnown RBP23.9■■□□□ 1.42
PMS1-211ENST00000424766 PIGSQ96S52 555 aa23.9■■□□□ 1.42
PMS1-211ENST00000424766 SRRDQ9UH36 339 aa23.9■■□□□ 1.42
PMS1-211ENST00000424766 GJD2Q9UKL4 321 aa23.9■■□□□ 1.42
PMS1-211ENST00000424766 SLC15A5A6NIM6 579 aa23.89■■□□□ 1.41
PMS1-211ENST00000424766 ALAS1P13196 640 aa23.89■■□□□ 1.41
PMS1-211ENST00000424766 FUT2Q10981 343 aa23.89■■□□□ 1.41
PMS1-211ENST00000424766 CMTR1Q8N1G2 835 aaKnown RBP23.89■■□□□ 1.41
PMS1-211ENST00000424766 TRERF1Q96PN7 1200 aa23.89■■□□□ 1.41
PMS1-211ENST00000424766 AMNQ9BXJ7 453 aa23.89■■□□□ 1.41
PMS1-211ENST00000424766 SLKQ9H2G2 1235 aaPredicted RBP23.89■■□□□ 1.41
PMS1-211ENST00000424766 ST18O60284 1047 aa23.88■■□□□ 1.41
PMS1-211ENST00000424766 PFKFB2O60825 505 aa23.88■■□□□ 1.41
PMS1-211ENST00000424766 FCER1AP12319 257 aa23.88■■□□□ 1.41
PMS1-211ENST00000424766 CCT2P78371 535 aaKnown RBP23.88■■□□□ 1.41
PMS1-211ENST00000424766 PKN2Q16513 984 aaKnown RBP23.88■■□□□ 1.41
PMS1-211ENST00000424766 MORN1Q5T089 497 aa23.88■■□□□ 1.41
PMS1-211ENST00000424766 CCDC82Q8N4S0 544 aa23.88■■□□□ 1.41
PMS1-211ENST00000424766 NUDT12Q9BQG2 462 aa23.88■■□□□ 1.41
PMS1-211ENST00000424766 RNF146Q9NTX7 359 aa23.88■■□□□ 1.41
PMS1-211ENST00000424766 LIMCH1Q9UPQ0 1083 aa23.88■■□□□ 1.41
PMS1-211ENST00000424766 STK3Q13188 491 aa23.87■■□□□ 1.41
PMS1-211ENST00000424766 NTRK3Q16288 839 aa23.87■■□□□ 1.41
PMS1-211ENST00000424766 HOMER1Q86YM7 354 aa23.87■■□□□ 1.41
PMS1-211ENST00000424766 SOCS4Q8WXH5 440 aa23.87■■□□□ 1.41
PMS1-211ENST00000424766 ACAD9Q9H845 621 aa23.87■■□□□ 1.41
PMS1-211ENST00000424766 NCOA5Q9HCD5 579 aaKnown RBP23.87■■□□□ 1.41
PMS1-211ENST00000424766 SEC63Q9UGP8 760 aaKnown RBP23.87■■□□□ 1.41
PMS1-211ENST00000424766 ABCB11O95342 1321 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms