RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 ESR2Q92731 530 aa8.29□□□□□ -1.08
EPHA4-206ENST00000424339 KCNB2Q92953 911 aa8.29□□□□□ -1.08
EPHA4-206ENST00000424339 HHIPL1Q96JK4 782 aa8.29□□□□□ -1.08
EPHA4-206ENST00000424339 MTA3Q9BTC8 594 aa8.29□□□□□ -1.08
EPHA4-206ENST00000424339 BEGAINQ9BUH8 593 aa8.29□□□□□ -1.08
EPHA4-206ENST00000424339 USP26Q9BXU7 913 aa8.29□□□□□ -1.08
EPHA4-206ENST00000424339 MKNK2Q9HBH9 465 aa8.29□□□□□ -1.08
EPHA4-206ENST00000424339 ZNF112Q9UJU3 913 aa8.29□□□□□ -1.08
EPHA4-206ENST00000424339 CSADQ9Y600 493 aa8.29□□□□□ -1.08
EPHA4-206ENST00000424339 PLIN4Q96Q06 1357 aa8.29□□□□□ -1.08
EPHA4-206ENST00000424339 SIPA1L1O43166 1804 aa8.29□□□□□ -1.08
EPHA4-206ENST00000424339 ZMYND10O75800 440 aa8.28□□□□□ -1.08
EPHA4-206ENST00000424339 CYP21A2P08686 494 aa8.28□□□□□ -1.08
EPHA4-206ENST00000424339 PSMA5P28066 241 aa8.28□□□□□ -1.08
EPHA4-206ENST00000424339 CDK8P49336 464 aa8.28□□□□□ -1.08
EPHA4-206ENST00000424339 CERKLQ49MI3 558 aaPredicted RBP8.28□□□□□ -1.08
EPHA4-206ENST00000424339 NOL9Q5SY16 702 aaKnown RBP8.28□□□□□ -1.08
EPHA4-206ENST00000424339 CREB3L3Q68CJ9 461 aa8.28□□□□□ -1.08
EPHA4-206ENST00000424339 TMEM179Q6ZVK1 233 aa8.28□□□□□ -1.08
EPHA4-206ENST00000424339 IQCA1Q86XH1 822 aa8.28□□□□□ -1.08
EPHA4-206ENST00000424339 TRMT44Q8IYL2 757 aaKnown RBP8.28□□□□□ -1.08
EPHA4-206ENST00000424339 ANKRD13AQ8IZ07 590 aa8.28□□□□□ -1.08
EPHA4-206ENST00000424339 ZNF444Q8N0Y2 327 aaPredicted RBP8.28□□□□□ -1.08
EPHA4-206ENST00000424339 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.28□□□□□ -1.08
EPHA4-206ENST00000424339 NCOA7Q8NI08 942 aa8.28□□□□□ -1.08
EPHA4-206ENST00000424339 KLRG1Q96E93 195 aa8.28□□□□□ -1.08
EPHA4-206ENST00000424339 IL17RAQ96F46 866 aa8.28□□□□□ -1.08
EPHA4-206ENST00000424339 KRTAP4-8Q9BYQ9 185 aa8.28□□□□□ -1.08
EPHA4-206ENST00000424339 GBA2Q9HCG7 927 aaPredicted RBP8.28□□□□□ -1.08
EPHA4-206ENST00000424339 CABP5Q9NP86 173 aa8.28□□□□□ -1.08
EPHA4-206ENST00000424339 SYNPO2Q9UMS6 1093 aa8.28□□□□□ -1.08
EPHA4-206ENST00000424339 WDR19Q8NEZ3 1342 aa8.28□□□□□ -1.08
EPHA4-206ENST00000424339 SSC5DA1L4H1 1573 aa8.27□□□□□ -1.09
EPHA4-206ENST00000424339 TMEM88BA6NKF7 163 aa8.27□□□□□ -1.09
EPHA4-206ENST00000424339 SLC27A2O14975 620 aa8.27□□□□□ -1.09
EPHA4-206ENST00000424339 CELF2O95319 508 aaKnown RBP8.27□□□□□ -1.09
EPHA4-206ENST00000424339 SHMT1P34896 483 aa8.27□□□□□ -1.09
EPHA4-206ENST00000424339 CAP2P40123 477 aa8.27□□□□□ -1.09
EPHA4-206ENST00000424339 CTSOP43234 321 aaPredicted RBP8.27□□□□□ -1.09
EPHA4-206ENST00000424339 SART3Q15020 963 aaKnown RBP8.27□□□□□ -1.09
EPHA4-206ENST00000424339 SCYL3Q8IZE3 742 aa8.27□□□□□ -1.09
EPHA4-206ENST00000424339 WRNIP1Q96S55 665 aa8.27□□□□□ -1.09
EPHA4-206ENST00000424339 TM6SF1Q9BZW5 370 aa8.27□□□□□ -1.09
EPHA4-206ENST00000424339 POLMQ9NP87 494 aaPredicted RBP8.27□□□□□ -1.09
EPHA4-206ENST00000424339 PICK1Q9NRD5 415 aa8.27□□□□□ -1.09
EPHA4-206ENST00000424339 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.27□□□□□ -1.09
EPHA4-206ENST00000424339 DOCK1Q14185 1865 aa8.27□□□□□ -1.09
EPHA4-206ENST00000424339 CYP2D7A0A087X1C5 515 aa8.26□□□□□ -1.09
EPHA4-206ENST00000424339 TSPY2A6NKD2 308 aa8.26□□□□□ -1.09
EPHA4-206ENST00000424339 E7EWF7 191 aa8.26□□□□□ -1.09
EPHA4-206ENST00000424339 K7ELQ4 463 aaPredicted RBP8.26□□□□□ -1.09
EPHA4-206ENST00000424339 TRAF5O00463 557 aa8.26□□□□□ -1.09
EPHA4-206ENST00000424339 USP2O75604 605 aaPredicted RBP8.26□□□□□ -1.09
EPHA4-206ENST00000424339 TSPY3P0CV98 308 aa8.26□□□□□ -1.09
EPHA4-206ENST00000424339 TSPY8P0CW00 308 aa8.26□□□□□ -1.09
EPHA4-206ENST00000424339 CYP2D6P10635 497 aa8.26□□□□□ -1.09
EPHA4-206ENST00000424339 RASA1P20936 1047 aa8.26□□□□□ -1.09
EPHA4-206ENST00000424339 RBM25P49756 843 aaKnown RBP8.26□□□□□ -1.09
EPHA4-206ENST00000424339 HAND2P61296 217 aa8.26□□□□□ -1.09
EPHA4-206ENST00000424339 ABCB5Q2M3G0 1257 aa8.26□□□□□ -1.09
EPHA4-206ENST00000424339 LDLRAD1Q5T700 205 aa8.26□□□□□ -1.09
EPHA4-206ENST00000424339 MIGA2Q7L4E1 593 aa8.26□□□□□ -1.09
EPHA4-206ENST00000424339 TBC1D10CQ8IV04 446 aa8.26□□□□□ -1.09
EPHA4-206ENST00000424339 NEDD1Q8NHV4 660 aa8.26□□□□□ -1.09
EPHA4-206ENST00000424339 AGBL1Q96MI9 1066 aa8.26□□□□□ -1.09
EPHA4-206ENST00000424339 TTC14Q96N46 770 aa8.26□□□□□ -1.09
EPHA4-206ENST00000424339 INSM2Q96T92 566 aaPredicted RBP8.26□□□□□ -1.09
EPHA4-206ENST00000424339 SH2D4AQ9H788 454 aa8.26□□□□□ -1.09
EPHA4-206ENST00000424339 DNAJC18Q9H819 358 aa8.26□□□□□ -1.09
EPHA4-206ENST00000424339 ZNF408Q9H9D4 720 aa8.26□□□□□ -1.09
EPHA4-206ENST00000424339 KANSL2Q9H9L4 492 aa8.26□□□□□ -1.09
EPHA4-206ENST00000424339 AS3MTQ9HBK9 375 aa8.26□□□□□ -1.09
EPHA4-206ENST00000424339 TOMM22Q9NS69 142 aa8.26□□□□□ -1.09
EPHA4-206ENST00000424339 TCP11L1Q9NUJ3 509 aa8.26□□□□□ -1.09
EPHA4-206ENST00000424339 ANGEL1Q9UNK9 670 aaKnown RBP8.26□□□□□ -1.09
EPHA4-206ENST00000424339 GREB1LQ9C091 1923 aaPredicted RBP8.25□□□□□ -1.09
EPHA4-206ENST00000424339 ATAD5Q96QE3 1844 aa8.25□□□□□ -1.09
EPHA4-206ENST00000424339 ERICH2A1L162 156 aa8.25□□□□□ -1.09
EPHA4-206ENST00000424339 RANBP6O60518 1105 aaKnown RBP8.25□□□□□ -1.09
EPHA4-206ENST00000424339 MCM5P33992 734 aa8.25□□□□□ -1.09
EPHA4-206ENST00000424339 RELBQ01201 579 aa8.25□□□□□ -1.09
EPHA4-206ENST00000424339 CTDSPL2Q05D32 466 aa8.25□□□□□ -1.09
EPHA4-206ENST00000424339 PPATQ06203 517 aa8.25□□□□□ -1.09
EPHA4-206ENST00000424339 PRPF38BQ5VTL8 546 aaKnown RBP8.25□□□□□ -1.09
EPHA4-206ENST00000424339 PRAMEF18Q5VWM3 479 aa8.25□□□□□ -1.09
EPHA4-206ENST00000424339 CST9Q5W186 159 aa8.25□□□□□ -1.09
EPHA4-206ENST00000424339 ERO1BQ86YB8 467 aa8.25□□□□□ -1.09
EPHA4-206ENST00000424339 TMTC2Q8N394 836 aa8.25□□□□□ -1.09
EPHA4-206ENST00000424339 DYNLL2Q96FJ2 89 aa8.25□□□□□ -1.09
EPHA4-206ENST00000424339 TMEM87BQ96K49 555 aa8.25□□□□□ -1.09
EPHA4-206ENST00000424339 NEK1Q96PY6 1258 aa8.25□□□□□ -1.09
EPHA4-206ENST00000424339 UBAC1Q9BSL1 405 aa8.25□□□□□ -1.09
EPHA4-206ENST00000424339 C22orf23Q9BZE7 217 aa8.25□□□□□ -1.09
EPHA4-206ENST00000424339 ZBTB21Q9ULJ3 1066 aa8.25□□□□□ -1.09
EPHA4-206ENST00000424339 SCAF8Q9UPN6 1271 aaKnown RBP8.25□□□□□ -1.09
EPHA4-206ENST00000424339 OTOFQ9HC10 1997 aa8.24□□□□□ -1.09
EPHA4-206ENST00000424339 USP17L5A8MUK1 530 aa8.24□□□□□ -1.09
EPHA4-206ENST00000424339 TTLL1O95922 423 aa8.24□□□□□ -1.09
EPHA4-206ENST00000424339 GH2P01242 217 aa8.24□□□□□ -1.09
EPHA4-206ENST00000424339 ZBTB48P10074 688 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms