RNA–Protein interactions for RNA: ENST00000424326.5

SCN7A-203, Transcript of sodium voltage-gated channel alpha subunit 7, humanhuman

TSL 1 (best)

Gene SCN7A, Length 5,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7A-203ENST00000424326 CASQ1P31415 396 aa8.58□□□□□ -1.04
SCN7A-203ENST00000424326 PRPHP41219 470 aa8.58□□□□□ -1.04
SCN7A-203ENST00000424326 LPAR1Q92633 364 aa8.58□□□□□ -1.04
SCN7A-203ENST00000424326 TCHPQ9BT92 498 aa8.58□□□□□ -1.04
SCN7A-203ENST00000424326 BEGAINQ9BUH8 593 aa8.58□□□□□ -1.04
SCN7A-203ENST00000424326 PCDHB13Q9Y5F0 798 aa8.58□□□□□ -1.04
SCN7A-203ENST00000424326 SMIM5Q71RC9 77 aa8.58□□□□□ -1.04
SCN7A-203ENST00000424326 ZNF579Q8NAF0 562 aaKnown RBP8.58□□□□□ -1.04
SCN7A-203ENST00000424326 LINC00301Q8NCQ3 95 aa8.58□□□□□ -1.04
SCN7A-203ENST00000424326 RBM46Q8TBY0 533 aaKnown RBP8.58□□□□□ -1.04
SCN7A-203ENST00000424326 SLC10A4Q96EP9 437 aa8.58□□□□□ -1.04
SCN7A-203ENST00000424326 BRPF3Q9ULD4 1205 aa8.58□□□□□ -1.04
SCN7A-203ENST00000424326 ZBTB21Q9ULJ3 1066 aa8.58□□□□□ -1.04
SCN7A-203ENST00000424326 SRPRBQ9Y5M8 271 aaKnown RBP8.58□□□□□ -1.04
SCN7A-203ENST00000424326 USP17L10C9JJH3 530 aa8.58□□□□□ -1.04
SCN7A-203ENST00000424326 CD2BP2O95400 341 aaKnown RBP8.58□□□□□ -1.04
SCN7A-203ENST00000424326 CDC42EP5Q6NZY7 148 aa8.58□□□□□ -1.04
SCN7A-203ENST00000424326 CEP95Q96GE4 821 aa8.58□□□□□ -1.04
SCN7A-203ENST00000424326 GSDMAQ96QA5 445 aa8.58□□□□□ -1.04
SCN7A-203ENST00000424326 NRBP2Q9NSY0 501 aa8.58□□□□□ -1.04
SCN7A-203ENST00000424326 PHRF1Q9P1Y6 1649 aaKnown RBP8.58□□□□□ -1.04
SCN7A-203ENST00000424326 ANKRD62A6NC57 917 aa8.57□□□□□ -1.04
SCN7A-203ENST00000424326 TRAF5O00463 557 aa8.57□□□□□ -1.04
SCN7A-203ENST00000424326 TM4SF1P30408 202 aa8.57□□□□□ -1.04
SCN7A-203ENST00000424326 UBXN1Q04323 297 aa8.57□□□□□ -1.04
SCN7A-203ENST00000424326 HERC4Q5GLZ8 1057 aaPredicted RBP8.57□□□□□ -1.04
SCN7A-203ENST00000424326 TEX35Q5T0J7 233 aa8.57□□□□□ -1.04
SCN7A-203ENST00000424326 GTF3C2Q8WUA4 911 aaPredicted RBP8.57□□□□□ -1.04
SCN7A-203ENST00000424326 CPLX3Q8WVH0 158 aa8.57□□□□□ -1.04
SCN7A-203ENST00000424326 ZDHHC15Q96MV8 337 aa8.57□□□□□ -1.04
SCN7A-203ENST00000424326 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.57□□□□□ -1.04
SCN7A-203ENST00000424326 MRIQ9BWK5 157 aa8.57□□□□□ -1.04
SCN7A-203ENST00000424326 GBP3Q9H0R5 595 aa8.57□□□□□ -1.04
SCN7A-203ENST00000424326 ZNF70Q9UC06 446 aaPredicted RBP8.57□□□□□ -1.04
SCN7A-203ENST00000424326 C19orf81C9J6K1 198 aa8.57□□□□□ -1.04
SCN7A-203ENST00000424326 SLC26A4O43511 780 aa8.57□□□□□ -1.04
SCN7A-203ENST00000424326 LMNB1P20700 586 aa8.57□□□□□ -1.04
SCN7A-203ENST00000424326 TBC1D10BQ4KMP7 808 aaPredicted RBP8.57□□□□□ -1.04
SCN7A-203ENST00000424326 ATP6V0A1Q93050 837 aa8.57□□□□□ -1.04
SCN7A-203ENST00000424326 PAGR1Q9BTK6 254 aa8.57□□□□□ -1.04
SCN7A-203ENST00000424326 SERTAD1Q9UHV2 236 aa8.57□□□□□ -1.04
SCN7A-203ENST00000424326 COL4A3BPQ9Y5P4 624 aa8.57□□□□□ -1.04
SCN7A-203ENST00000424326 PPP2R3BQ9Y5P8 575 aa8.57□□□□□ -1.04
SCN7A-203ENST00000424326 AKR1B10O60218 316 aa8.57□□□□□ -1.04
SCN7A-203ENST00000424326 GADD45BO75293 160 aaPredicted RBP8.57□□□□□ -1.04
SCN7A-203ENST00000424326 NCAPG2Q86XI2 1143 aa8.57□□□□□ -1.04
SCN7A-203ENST00000424326 CSGALNACT2Q8N6G5 542 aa8.57□□□□□ -1.04
SCN7A-203ENST00000424326 LMBR1Q8WVP7 490 aa8.57□□□□□ -1.04
SCN7A-203ENST00000424326 PSMD1Q99460 953 aa8.57□□□□□ -1.04
SCN7A-203ENST00000424326 NUCKS1Q9H1E3 243 aaKnown RBP8.57□□□□□ -1.04
SCN7A-203ENST00000424326 EHD4Q9H223 541 aa8.57□□□□□ -1.04
SCN7A-203ENST00000424326 CNOT7Q9UIV1 285 aaKnown RBP8.57□□□□□ -1.04
SCN7A-203ENST00000424326 CTNND2Q9UQB3 1225 aa8.57□□□□□ -1.04
SCN7A-203ENST00000424326 CLIC4Q9Y696 253 aa8.57□□□□□ -1.04
SCN7A-203ENST00000424326 ATRNO75882 1429 aa8.57□□□□□ -1.04
SCN7A-203ENST00000424326 ONECUT3O60422 494 aaPredicted RBP8.57□□□□□ -1.04
SCN7A-203ENST00000424326 EEF2P13639 858 aaKnown RBP8.57□□□□□ -1.04
SCN7A-203ENST00000424326 GAP43P17677 238 aa8.57□□□□□ -1.04
SCN7A-203ENST00000424326 TUBB4BP68371 445 aa8.57□□□□□ -1.04
SCN7A-203ENST00000424326 MSANTD4Q8NCY6 345 aa8.57□□□□□ -1.04
SCN7A-203ENST00000424326 VTI1AQ96AJ9 217 aa8.57□□□□□ -1.04
SCN7A-203ENST00000424326 PLIN2Q99541 437 aa8.57□□□□□ -1.04
SCN7A-203ENST00000424326 MLXIPQ9HAP2 919 aa8.57□□□□□ -1.04
SCN7A-203ENST00000424326 POLLQ9UGP5 575 aa8.57□□□□□ -1.04
SCN7A-203ENST00000424326 TECP42680 631 aa8.56□□□□□ -1.04
SCN7A-203ENST00000424326 TKFCQ3LXA3 575 aa8.56□□□□□ -1.04
SCN7A-203ENST00000424326 CCDC84Q86UT8 332 aaPredicted RBP8.56□□□□□ -1.04
SCN7A-203ENST00000424326 MICALL2Q8IY33 904 aa8.56□□□□□ -1.04
SCN7A-203ENST00000424326 GIMAP8Q8ND71 665 aaPredicted RBP8.56□□□□□ -1.04
SCN7A-203ENST00000424326 TBCKQ8TEA7 893 aa8.56□□□□□ -1.04
SCN7A-203ENST00000424326 PLVAPQ9BX97 442 aa8.56□□□□□ -1.04
SCN7A-203ENST00000424326 MTMR4Q9NYA4 1195 aa8.56□□□□□ -1.04
SCN7A-203ENST00000424326 LUC7L2Q9Y383 392 aaKnown RBP8.56□□□□□ -1.04
SCN7A-203ENST00000424326 TESPA1A2RU30 521 aaPredicted RBP8.56□□□□□ -1.04
SCN7A-203ENST00000424326 LARGE1O95461 756 aa8.56□□□□□ -1.04
SCN7A-203ENST00000424326 PAFAH1B1P43034 410 aa8.56□□□□□ -1.04
SCN7A-203ENST00000424326 CLEC17AQ6ZS10 378 aa8.56□□□□□ -1.04
SCN7A-203ENST00000424326 MIGA2Q7L4E1 593 aa8.56□□□□□ -1.04
SCN7A-203ENST00000424326 FASTKD5Q7L8L6 764 aaKnown RBP8.56□□□□□ -1.04
SCN7A-203ENST00000424326 BARHL2Q9NY43 387 aa8.56□□□□□ -1.04
SCN7A-203ENST00000424326 PKD2L1Q9P0L9 805 aa8.56□□□□□ -1.04
SCN7A-203ENST00000424326 POTEB2H3BUK9 544 aa8.56□□□□□ -1.04
SCN7A-203ENST00000424326 PSMD14O00487 310 aa8.56□□□□□ -1.04
SCN7A-203ENST00000424326 PDE4CQ08493 712 aa8.56□□□□□ -1.04
SCN7A-203ENST00000424326 TRMT1LQ7Z2T5 733 aaKnown RBP8.56□□□□□ -1.04
SCN7A-203ENST00000424326 SPICE1Q8N0Z3 855 aa8.56□□□□□ -1.04
SCN7A-203ENST00000424326 MYCT1Q8N699 235 aa8.56□□□□□ -1.04
SCN7A-203ENST00000424326 PRPF38AQ8NAV1 312 aaKnown RBP8.56□□□□□ -1.04
SCN7A-203ENST00000424326 IGDCC4Q8TDY8 1250 aa8.56□□□□□ -1.04
SCN7A-203ENST00000424326 FAM163AQ96GL9 167 aaPredicted RBP8.56□□□□□ -1.04
SCN7A-203ENST00000424326 NOC4LQ9BVI4 516 aaKnown RBP8.56□□□□□ -1.04
SCN7A-203ENST00000424326 HACL1Q9UJ83 578 aa8.56□□□□□ -1.04
SCN7A-203ENST00000424326 PAXBP1Q9Y5B6 917 aa8.56□□□□□ -1.04
SCN7A-203ENST00000424326 CACNA1FO60840 1977 aa8.56□□□□□ -1.04
SCN7A-203ENST00000424326 MYCNP04198 464 aaPredicted RBP8.56□□□□□ -1.04
SCN7A-203ENST00000424326 XRCC6P12956 609 aaKnown RBP eCLIP8.56□□□□□ -1.04
SCN7A-203ENST00000424326 GRM1Q13255 1194 aa8.56□□□□□ -1.04
SCN7A-203ENST00000424326 LRCH2Q5VUJ6 765 aa8.56□□□□□ -1.04
SCN7A-203ENST00000424326 DEFB132Q7Z7B7 95 aa8.56□□□□□ -1.04
SCN7A-203ENST00000424326 TPH2Q8IWU9 490 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms