RNA–Protein interactions for RNA: ENST00000424225.1

TOP2B-203, Transcript of DNA topoisomerase II beta, humanhuman

TSL 1 (best)

Gene TOP2B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-203ENST00000424225 TROAPQ12815 778 aa14.46□□□□□ -0.09
TOP2B-203ENST00000424225 BYSLQ13895 437 aaKnown RBP14.46□□□□□ -0.09
TOP2B-203ENST00000424225 TMEM60Q9H2L4 133 aa14.46□□□□□ -0.09
TOP2B-203ENST00000424225 RBM12Q9NTZ6 932 aaKnown RBP14.46□□□□□ -0.09
TOP2B-203ENST00000424225 DACH1Q9UI36 760 aa14.46□□□□□ -0.09
TOP2B-203ENST00000424225 ZNF330Q9Y3S2 320 aaPredicted RBP14.46□□□□□ -0.09
TOP2B-203ENST00000424225 PDE8BO95263 885 aa14.46□□□□□ -0.09
TOP2B-203ENST00000424225 RPN1P04843 607 aaKnown RBP14.46□□□□□ -0.09
TOP2B-203ENST00000424225 PAK1Q13153 545 aa14.46□□□□□ -0.09
TOP2B-203ENST00000424225 HSP90B2PQ58FF3 399 aa14.46□□□□□ -0.09
TOP2B-203ENST00000424225 ZNF512BQ96KM6 892 aaPredicted RBP14.46□□□□□ -0.09
TOP2B-203ENST00000424225 PLA2G12BQ9BX93 195 aa14.46□□□□□ -0.09
TOP2B-203ENST00000424225 CAPS2Q9BXY5 557 aa14.46□□□□□ -0.09
TOP2B-203ENST00000424225 TNS3Q68CZ2 1445 aa14.46□□□□□ -0.09
TOP2B-203ENST00000424225 TNKSO95271 1327 aa14.46□□□□□ -0.09
TOP2B-203ENST00000424225 GOLGA6BA6NDN3 693 aa14.46□□□□□ -0.1
TOP2B-203ENST00000424225 TRIM75PA6NK02 468 aa14.46□□□□□ -0.1
TOP2B-203ENST00000424225 LGALS16A8MUM7 142 aa14.46□□□□□ -0.1
TOP2B-203ENST00000424225 MATR3P43243 847 aaKnown RBP eCLIP14.46□□□□□ -0.11e-6■■■■□ 20.7
TOP2B-203ENST00000424225 CARSP49589 748 aaKnown RBP14.46□□□□□ -0.1
TOP2B-203ENST00000424225 DNAAF5Q86Y56 855 aa14.46□□□□□ -0.1
TOP2B-203ENST00000424225 OR8K1Q8NGG5 319 aa14.46□□□□□ -0.1
TOP2B-203ENST00000424225 SLC4A4Q9Y6R1 1079 aa14.46□□□□□ -0.1
TOP2B-203ENST00000424225 NUP98P52948 1817 aa14.46□□□□□ -0.1
TOP2B-203ENST00000424225 ATP2B2Q01814 1243 aa14.45□□□□□ -0.1
TOP2B-203ENST00000424225 WTAPQ15007 396 aa14.45□□□□□ -0.1
TOP2B-203ENST00000424225 ZNF572Q7Z3I7 529 aaPredicted RBP14.45□□□□□ -0.1
TOP2B-203ENST00000424225 ANKRD13CQ8N6S4 541 aa14.45□□□□□ -0.1
TOP2B-203ENST00000424225 SPATA4Q8NEY3 305 aa14.45□□□□□ -0.1
TOP2B-203ENST00000424225 MTMR8Q96EF0 704 aa14.45□□□□□ -0.1
TOP2B-203ENST00000424225 TBC1D2BQ9UPU7 963 aa14.45□□□□□ -0.1
TOP2B-203ENST00000424225 TDO2P48775 406 aa14.45□□□□□ -0.1
TOP2B-203ENST00000424225 BCAMP50895 628 aa14.45□□□□□ -0.1
TOP2B-203ENST00000424225 TUBB2AQ13885 445 aa14.45□□□□□ -0.1
TOP2B-203ENST00000424225 TAF7LQ5H9L4 462 aa14.45□□□□□ -0.1
TOP2B-203ENST00000424225 ZNF658Q5TYW1 1059 aaPredicted RBP14.45□□□□□ -0.1
TOP2B-203ENST00000424225 SMARCC1Q92922 1105 aaPredicted RBP14.45□□□□□ -0.1
TOP2B-203ENST00000424225 TUBB2BQ9BVA1 445 aa14.45□□□□□ -0.1
TOP2B-203ENST00000424225 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.45□□□□□ -0.12e-8■■■■□ 22.7
TOP2B-203ENST00000424225 SNX12Q9UMY4 172 aa14.45□□□□□ -0.1
TOP2B-203ENST00000424225 BACH1O14867 736 aa14.45□□□□□ -0.1
TOP2B-203ENST00000424225 ECHS1P30084 290 aa14.45□□□□□ -0.1
TOP2B-203ENST00000424225 CTAGE1Q96RT6 745 aa14.45□□□□□ -0.1
TOP2B-203ENST00000424225 CXorf56Q9H5V9 222 aa14.45□□□□□ -0.1
TOP2B-203ENST00000424225 IQSEC3Q9UPP2 1182 aaPredicted RBP14.45□□□□□ -0.1
TOP2B-203ENST00000424225 FCER1AP12319 257 aa14.44□□□□□ -0.1
TOP2B-203ENST00000424225 MCM7P33993 719 aa14.44□□□□□ -0.1
TOP2B-203ENST00000424225 IFIT5Q13325 482 aaKnown RBP14.44□□□□□ -0.1
TOP2B-203ENST00000424225 QPCTQ16769 361 aa14.44□□□□□ -0.1
TOP2B-203ENST00000424225 MFSD6Q6ZSS7 791 aa14.44□□□□□ -0.1
TOP2B-203ENST00000424225 SLC51AQ86UW1 340 aa14.44□□□□□ -0.1
TOP2B-203ENST00000424225 IQCKQ8N0W5 287 aa14.44□□□□□ -0.1
TOP2B-203ENST00000424225 ZBTB38Q8NAP3 1195 aaPredicted RBP14.44□□□□□ -0.1
TOP2B-203ENST00000424225 SPATA5Q8NB90 893 aa14.44□□□□□ -0.1
TOP2B-203ENST00000424225 GLIS3Q8NEA6 775 aa14.44□□□□□ -0.1
TOP2B-203ENST00000424225 FAM76AQ8TAV0 307 aa14.44□□□□□ -0.1
TOP2B-203ENST00000424225 HAUS4Q9H6D7 363 aa14.44□□□□□ -0.1
TOP2B-203ENST00000424225 FAM184BQ9ULE4 1060 aa14.44□□□□□ -0.1
TOP2B-203ENST00000424225 CNTNAP5Q8WYK1 1306 aa14.44□□□□□ -0.1
TOP2B-203ENST00000424225 A0A1B0GUL6 1792 aa14.44□□□□□ -0.1
TOP2B-203ENST00000424225 ANKRD40Q6AI12 368 aa14.44□□□□□ -0.1
TOP2B-203ENST00000424225 PIK3AP1Q6ZUJ8 805 aa14.44□□□□□ -0.1
TOP2B-203ENST00000424225 FAM212AQ96EL1 285 aa14.44□□□□□ -0.1
TOP2B-203ENST00000424225 CEP89Q96ST8 783 aa14.44□□□□□ -0.1
TOP2B-203ENST00000424225 TLR10Q9BXR5 811 aa14.44□□□□□ -0.1
TOP2B-203ENST00000424225 C1orf167Q5SNV9 1468 aa14.44□□□□□ -0.1
TOP2B-203ENST00000424225 SRGNP10124 158 aa14.44□□□□□ -0.1
TOP2B-203ENST00000424225 IDEP14735 1019 aa14.44□□□□□ -0.1
TOP2B-203ENST00000424225 HDLBPQ00341 1268 aaKnown RBP14.44□□□□□ -0.1
TOP2B-203ENST00000424225 ZNF662Q6ZS27 426 aa14.44□□□□□ -0.1
TOP2B-203ENST00000424225 MMGT1Q8N4V1 131 aa14.44□□□□□ -0.1
TOP2B-203ENST00000424225 NAPBQ9H115 298 aa14.44□□□□□ -0.1
TOP2B-203ENST00000424225 ASAP1Q9ULH1 1129 aa14.44□□□□□ -0.1
TOP2B-203ENST00000424225 DCDC2CA8MYV0 355 aa14.43□□□□□ -0.1
TOP2B-203ENST00000424225 SKOR1P84550 965 aa14.43□□□□□ -0.1
TOP2B-203ENST00000424225 STK4Q13043 487 aa14.43□□□□□ -0.1
TOP2B-203ENST00000424225 PPFIA1Q13136 1202 aa14.43□□□□□ -0.1
TOP2B-203ENST00000424225 TTC38Q5R3I4 469 aa14.43□□□□□ -0.1
TOP2B-203ENST00000424225 KANK3Q6NY19 840 aa14.43□□□□□ -0.1
TOP2B-203ENST00000424225 NLRP10Q86W26 655 aa14.43□□□□□ -0.1
TOP2B-203ENST00000424225 MYCBPQ99417 103 aaPredicted RBP14.43□□□□□ -0.1
TOP2B-203ENST00000424225 ANKRD36CQ5JPF3 1778 aa14.43□□□□□ -0.1
TOP2B-203ENST00000424225 ZKSCAN4Q969J2 545 aaPredicted RBP14.43□□□□□ -0.1
TOP2B-203ENST00000424225 COL16A1Q07092 1604 aaPredicted RBP14.43□□□□□ -0.1
TOP2B-203ENST00000424225 M0R2N6 131 aa14.42□□□□□ -0.1
TOP2B-203ENST00000424225 DNM1LO00429 736 aa14.42□□□□□ -0.1
TOP2B-203ENST00000424225 EIF5P55010 431 aaKnown RBP14.42□□□□□ -0.1
TOP2B-203ENST00000424225 ANKRD18AQ8IVF6 992 aa14.42□□□□□ -0.1
TOP2B-203ENST00000424225 CTCFLQ8NI51 663 aaPredicted RBP14.42□□□□□ -0.1
TOP2B-203ENST00000424225 UTRNP46939 3433 aa14.42□□□□□ -0.1
TOP2B-203ENST00000424225 ECM2O94769 699 aaPredicted RBP14.42□□□□□ -0.1
TOP2B-203ENST00000424225 JPH2Q9BR39 696 aaPredicted RBP14.42□□□□□ -0.1
TOP2B-203ENST00000424225 JADE2Q9NQC1 790 aa14.42□□□□□ -0.1
TOP2B-203ENST00000424225 CAPN7Q9Y6W3 813 aa14.42□□□□□ -0.1
TOP2B-203ENST00000424225 PCNTO95613 3336 aa14.42□□□□□ -0.1
TOP2B-203ENST00000424225 SCP2P22307 547 aa14.42□□□□□ -0.1
TOP2B-203ENST00000424225 KRT2P35908 639 aa14.42□□□□□ -0.1
TOP2B-203ENST00000424225 DYNLL1P63167 89 aaKnown RBP14.42□□□□□ -0.1
TOP2B-203ENST00000424225 NAA35Q5VZE5 725 aa14.42□□□□□ -0.1
TOP2B-203ENST00000424225 C6orf89Q6UWU4 347 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms