RNA–Protein interactions for RNA: ENST00000423698.6

ERCC1-204, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2 BASIC

Gene ERCC1, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-204ENST00000423698 CACNB3P54284 484 aa13.23□□□□□ -0.29
ERCC1-204ENST00000423698 NAPAP54920 295 aa13.23□□□□□ -0.29
ERCC1-204ENST00000423698 SPATA1Q5VX52 437 aa13.23□□□□□ -0.29
ERCC1-204ENST00000423698 LRRC15Q8TF66 581 aa13.23□□□□□ -0.29
ERCC1-204ENST00000423698 CAPZA3Q96KX2 299 aa13.23□□□□□ -0.29
ERCC1-204ENST00000423698 PSMB7Q99436 277 aa13.23□□□□□ -0.29
ERCC1-204ENST00000423698 BRIP1Q9BX63 1249 aa13.23□□□□□ -0.29
ERCC1-204ENST00000423698 KANSL2Q9H9L4 492 aa13.23□□□□□ -0.29
ERCC1-204ENST00000423698 COL16A1Q07092 1604 aaPredicted RBP13.23□□□□□ -0.29
ERCC1-204ENST00000423698 CICQ96RK0 1608 aaPredicted RBP13.23□□□□□ -0.29
ERCC1-204ENST00000423698 GYPCP04921 128 aa13.23□□□□□ -0.29
ERCC1-204ENST00000423698 SSBP05455 408 aaKnown RBP eCLIP13.23□□□□□ -0.29
ERCC1-204ENST00000423698 TXKP42681 527 aa13.23□□□□□ -0.29
ERCC1-204ENST00000423698 PPARDQ03181 441 aa13.23□□□□□ -0.29
ERCC1-204ENST00000423698 MICALL1Q8N3F8 863 aa13.23□□□□□ -0.29
ERCC1-204ENST00000423698 NCAPGQ9BPX3 1015 aa13.23□□□□□ -0.29
ERCC1-204ENST00000423698 CDCA7Q9BWT1 371 aaPredicted RBP13.23□□□□□ -0.29
ERCC1-204ENST00000423698 HDAC6Q9UBN7 1215 aa13.23□□□□□ -0.29
ERCC1-204ENST00000423698 EFCAB8A8MWE9 144 aa13.22□□□□□ -0.29
ERCC1-204ENST00000423698 KLRF2D3W0D1 207 aa13.22□□□□□ -0.29
ERCC1-204ENST00000423698 SRGAP2O75044 1071 aa13.22□□□□□ -0.29
ERCC1-204ENST00000423698 ZMYND10O75800 440 aa13.22□□□□□ -0.29
ERCC1-204ENST00000423698 FCER1AP12319 257 aa13.22□□□□□ -0.29
ERCC1-204ENST00000423698 TAL1P17542 331 aaPredicted RBP13.22□□□□□ -0.29
ERCC1-204ENST00000423698 KRT9P35527 623 aa13.22□□□□□ -0.29
ERCC1-204ENST00000423698 SLC16A2P36021 539 aa13.22□□□□□ -0.29
ERCC1-204ENST00000423698 SATB1Q01826 763 aa13.22□□□□□ -0.29
ERCC1-204ENST00000423698 SF3B3Q15393 1217 aaKnown RBP13.22□□□□□ -0.29
ERCC1-204ENST00000423698 FILIP1LQ4L180 1135 aa13.22□□□□□ -0.29
ERCC1-204ENST00000423698 CT47A1Q5JQC4 288 aaPredicted RBP13.22□□□□□ -0.29
ERCC1-204ENST00000423698 BANK1Q8NDB2 785 aa13.22□□□□□ -0.29
ERCC1-204ENST00000423698 TRIM47Q96LD4 638 aa13.22□□□□□ -0.29
ERCC1-204ENST00000423698 TMEM47Q9BQJ4 181 aa13.22□□□□□ -0.29
ERCC1-204ENST00000423698 RPN1P04843 607 aaKnown RBP13.22□□□□□ -0.29
ERCC1-204ENST00000423698 BTDP43251 543 aa13.22□□□□□ -0.29
ERCC1-204ENST00000423698 SNAP25P60880 206 aa13.22□□□□□ -0.29
ERCC1-204ENST00000423698 SHROOM1Q2M3G4 852 aaPredicted RBP13.22□□□□□ -0.29
ERCC1-204ENST00000423698 SLC35F6Q8N357 371 aa13.22□□□□□ -0.29
ERCC1-204ENST00000423698 TBC1D7Q9P0N9 293 aa13.22□□□□□ -0.29
ERCC1-204ENST00000423698 CEP83Q9Y592 693 aa13.22□□□□□ -0.29
ERCC1-204ENST00000423698 KCNJ18B7U540 433 aa13.22□□□□□ -0.29
ERCC1-204ENST00000423698 KCNJ12Q14500 433 aa13.22□□□□□ -0.29
ERCC1-204ENST00000423698 PFKFB3Q16875 520 aaPredicted RBP13.22□□□□□ -0.29
ERCC1-204ENST00000423698 DTHD1Q6ZMT9 781 aa13.22□□□□□ -0.29
ERCC1-204ENST00000423698 TEX11Q8IYF3 940 aa13.22□□□□□ -0.29
ERCC1-204ENST00000423698 DEF6Q9H4E7 631 aa13.22□□□□□ -0.29
ERCC1-204ENST00000423698 ADD3Q9UEY8 706 aaKnown RBP13.22□□□□□ -0.29
ERCC1-204ENST00000423698 FAM237AA0A1B0GTK4 181 aa13.21□□□□□ -0.29
ERCC1-204ENST00000423698 B4DLN1 442 aa13.21□□□□□ -0.29
ERCC1-204ENST00000423698 MPHOSPH10O00566 681 aaKnown RBP13.21□□□□□ -0.29
ERCC1-204ENST00000423698 IDEP14735 1019 aa13.21□□□□□ -0.29
ERCC1-204ENST00000423698 GUCY2CP25092 1073 aa13.21□□□□□ -0.29
ERCC1-204ENST00000423698 ATP2C1P98194 919 aaPredicted RBP13.21□□□□□ -0.29
ERCC1-204ENST00000423698 CACNB1Q02641 598 aaPredicted RBP13.21□□□□□ -0.29
ERCC1-204ENST00000423698 PAK1Q13153 545 aa13.21□□□□□ -0.29
ERCC1-204ENST00000423698 DOK7Q18PE1 504 aa13.21□□□□□ -0.29
ERCC1-204ENST00000423698 NCAPH2Q6IBW4 605 aa13.21□□□□□ -0.29
ERCC1-204ENST00000423698 SMARCC1Q92922 1105 aaPredicted RBP13.21□□□□□ -0.29
ERCC1-204ENST00000423698 PIGSQ96S52 555 aa13.21□□□□□ -0.29
ERCC1-204ENST00000423698 RBM28Q9NW13 759 aaKnown RBP13.21□□□□□ -0.29
ERCC1-204ENST00000423698 USP21Q9UK80 565 aa13.21□□□□□ -0.29
ERCC1-204ENST00000423698 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.21□□□□□ -0.293e-29■■■□□ 18.4
ERCC1-204ENST00000423698 CCDC175P0C221 793 aa13.21□□□□□ -0.3
ERCC1-204ENST00000423698 ERVK-24P63145 666 aa13.21□□□□□ -0.3
ERCC1-204ENST00000423698 GPSM2P81274 684 aa13.21□□□□□ -0.3
ERCC1-204ENST00000423698 CYP27A1Q02318 531 aa13.21□□□□□ -0.3
ERCC1-204ENST00000423698 TBX2Q13207 712 aaPredicted RBP13.21□□□□□ -0.3
ERCC1-204ENST00000423698 LRRC41Q15345 812 aa13.21□□□□□ -0.3
ERCC1-204ENST00000423698 KANK3Q6NY19 840 aa13.21□□□□□ -0.3
ERCC1-204ENST00000423698 APTXQ7Z2E3 356 aaKnown RBP13.21□□□□□ -0.3
ERCC1-204ENST00000423698 CNBD1Q8NA66 436 aa13.21□□□□□ -0.3
ERCC1-204ENST00000423698 TNFRSF25Q93038 417 aa13.21□□□□□ -0.3
ERCC1-204ENST00000423698 SLC39A2Q9NP94 309 aa13.21□□□□□ -0.3
ERCC1-204ENST00000423698 ANAPC4Q9UJX5 808 aa13.21□□□□□ -0.3
ERCC1-204ENST00000423698 A0A1B0GTH6 734 aa13.2□□□□□ -0.3
ERCC1-204ENST00000423698 USP17L5A8MUK1 530 aa13.2□□□□□ -0.3
ERCC1-204ENST00000423698 GTF2IP78347 998 aa13.2□□□□□ -0.3
ERCC1-204ENST00000423698 DNAJC21Q5F1R6 531 aaKnown RBP13.2□□□□□ -0.3
ERCC1-204ENST00000423698 MFSD14BQ5SR56 506 aa13.2□□□□□ -0.3
ERCC1-204ENST00000423698 RPGRQ92834 1020 aaKnown RBP13.2□□□□□ -0.3
ERCC1-204ENST00000423698 LIG3P49916 1009 aa13.2□□□□□ -0.3
ERCC1-204ENST00000423698 ASIC1P78348 528 aa13.2□□□□□ -0.3
ERCC1-204ENST00000423698 TXNRD1Q16881 649 aa13.2□□□□□ -0.3
ERCC1-204ENST00000423698 EYA3Q99504 573 aa13.2□□□□□ -0.3
ERCC1-204ENST00000423698 MAD2L2Q9UI95 211 aa13.2□□□□□ -0.3
ERCC1-204ENST00000423698 PCDHA6Q9UN73 950 aa13.2□□□□□ -0.3
ERCC1-204ENST00000423698 PCDHA8Q9Y5H6 950 aa13.2□□□□□ -0.3
ERCC1-204ENST00000423698 ADGRG1Q9Y653 693 aa13.2□□□□□ -0.3
ERCC1-204ENST00000423698 ECM29Q5VYK3 1845 aa13.2□□□□□ -0.3
ERCC1-204ENST00000423698 STX10O60499 249 aa13.19□□□□□ -0.3
ERCC1-204ENST00000423698 KIF5BP33176 963 aa13.19□□□□□ -0.3
ERCC1-204ENST00000423698 TCP10Q12799 353 aa13.19□□□□□ -0.3
ERCC1-204ENST00000423698 UBE2SQ16763 222 aa13.19□□□□□ -0.3
ERCC1-204ENST00000423698 C12orf60Q5U649 245 aa13.19□□□□□ -0.3
ERCC1-204ENST00000423698 PDXDC2PQ6P474 469 aa13.19□□□□□ -0.3
ERCC1-204ENST00000423698 ZNF579Q8NAF0 562 aaKnown RBP13.19□□□□□ -0.3
ERCC1-204ENST00000423698 EXOC4Q96A65 974 aa13.19□□□□□ -0.3
ERCC1-204ENST00000423698 FERMT2Q96AC1 680 aa13.19□□□□□ -0.3
ERCC1-204ENST00000423698 CEP95Q96GE4 821 aa13.19□□□□□ -0.3
ERCC1-204ENST00000423698 ZHX3Q9H4I2 956 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms