RNA–Protein interactions for RNA: ENST00000423251.1

MCF2L-214, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-214ENST00000423251 PORCNQ9H237 461 aa21.86■■□□□ 1.09
MCF2L-214ENST00000423251 ADCY3O60266 1144 aa21.85■■□□□ 1.09
MCF2L-214ENST00000423251 DDAH1O94760 285 aa21.85■■□□□ 1.09
MCF2L-214ENST00000423251 CALM1P0DP23 149 aa21.85■■□□□ 1.09
MCF2L-214ENST00000423251 CALM2P0DP24 149 aa21.85■■□□□ 1.09
MCF2L-214ENST00000423251 CALM3P0DP25 149 aa21.85■■□□□ 1.09
MCF2L-214ENST00000423251 CPA1P15085 419 aa21.85■■□□□ 1.09
MCF2L-214ENST00000423251 GRM4Q14833 912 aa21.85■■□□□ 1.09
MCF2L-214ENST00000423251 RIOX2Q8IUF8 465 aa21.85■■□□□ 1.09
MCF2L-214ENST00000423251 TCEANC2Q96MN5 208 aa21.85■■□□□ 1.09
MCF2L-214ENST00000423251 MROH8Q9H579 483 aa21.85■■□□□ 1.09
MCF2L-214ENST00000423251 SLC12A7Q9Y666 1083 aa21.85■■□□□ 1.09
MCF2L-214ENST00000423251 CYP46A1Q9Y6A2 500 aa21.85■■□□□ 1.09
MCF2L-214ENST00000423251 A0A0G2JMZ2 1700 aa21.85■■□□□ 1.09
MCF2L-214ENST00000423251 INHAP05111 366 aa21.84■■□□□ 1.09
MCF2L-214ENST00000423251 COPB2P35606 906 aa21.84■■□□□ 1.09
MCF2L-214ENST00000423251 SYNE3Q6ZMZ3 975 aa21.84■■□□□ 1.09
MCF2L-214ENST00000423251 PLEKHH3Q7Z736 793 aa21.84■■□□□ 1.09
MCF2L-214ENST00000423251 UBE2Q1Q7Z7E8 422 aa21.84■■□□□ 1.09
MCF2L-214ENST00000423251 U2AF1L4Q8WU68 220 aaKnown RBP21.84■■□□□ 1.09
MCF2L-214ENST00000423251 DPF3Q92784 378 aa21.84■■□□□ 1.09
MCF2L-214ENST00000423251 TEX13BQ9BXU2 312 aa21.84■■□□□ 1.09
MCF2L-214ENST00000423251 RANBP17Q9H2T7 1088 aaKnown RBP21.84■■□□□ 1.09
MCF2L-214ENST00000423251 MAD2L2Q9UI95 211 aa21.84■■□□□ 1.09
MCF2L-214ENST00000423251 TRIOBPQ9H2D6 2365 aa21.84■■□□□ 1.09
MCF2L-214ENST00000423251 KLRF2D3W0D1 207 aa21.83■■□□□ 1.09
MCF2L-214ENST00000423251 FGD1P98174 961 aa21.83■■□□□ 1.09
MCF2L-214ENST00000423251 Q6ZUG5 572 aa21.83■■□□□ 1.09
MCF2L-214ENST00000423251 GPR142Q7Z601 462 aa21.83■■□□□ 1.09
MCF2L-214ENST00000423251 CPXCR1Q8N123 301 aa21.83■■□□□ 1.09
MCF2L-214ENST00000423251 STAG2Q8N3U4 1231 aa21.83■■□□□ 1.09
MCF2L-214ENST00000423251 AGXT2Q9BYV1 514 aa21.83■■□□□ 1.09
MCF2L-214ENST00000423251 UBA5Q9GZZ9 404 aa21.83■■□□□ 1.09
MCF2L-214ENST00000423251 GJD2Q9UKL4 321 aa21.83■■□□□ 1.09
MCF2L-214ENST00000423251 STRNO43815 780 aa21.82■■□□□ 1.08
MCF2L-214ENST00000423251 ERCC3P19447 782 aa21.82■■□□□ 1.08
MCF2L-214ENST00000423251 CHRDL2Q6WN34 429 aa21.82■■□□□ 1.08
MCF2L-214ENST00000423251 CTCFLQ8NI51 663 aaPredicted RBP21.82■■□□□ 1.08
MCF2L-214ENST00000423251 NUP133Q8WUM0 1156 aa21.82■■□□□ 1.08
MCF2L-214ENST00000423251 CWC22Q9HCG8 908 aaKnown RBP21.82■■□□□ 1.08
MCF2L-214ENST00000423251 RAVER2Q9HCJ3 691 aaKnown RBP21.82■■□□□ 1.08
MCF2L-214ENST00000423251 PNMA2Q9UL42 364 aa21.82■■□□□ 1.08
MCF2L-214ENST00000423251 ZNF536O15090 1300 aa21.81■■□□□ 1.08
MCF2L-214ENST00000423251 FARP2O94887 1054 aaPredicted RBP21.81■■□□□ 1.08
MCF2L-214ENST00000423251 PTPREP23469 700 aa21.81■■□□□ 1.08
MCF2L-214ENST00000423251 KIF5BP33176 963 aa21.81■■□□□ 1.08
MCF2L-214ENST00000423251 IRF5Q13568 498 aa21.81■■□□□ 1.08
MCF2L-214ENST00000423251 SNRNP48Q6IEG0 339 aaKnown RBP21.81■■□□□ 1.08
MCF2L-214ENST00000423251 NCAPG2Q86XI2 1143 aa21.81■■□□□ 1.08
MCF2L-214ENST00000423251 ADGRF4Q8IZF3 695 aa21.81■■□□□ 1.08
MCF2L-214ENST00000423251 COL11A1P12107 1806 aaPredicted RBP21.8■■□□□ 1.08
MCF2L-214ENST00000423251 SLC15A5A6NIM6 579 aa21.8■■□□□ 1.08
MCF2L-214ENST00000423251 SMARCA1P28370 1054 aa21.8■■□□□ 1.08
MCF2L-214ENST00000423251 GNAQP50148 359 aa21.8■■□□□ 1.08
MCF2L-214ENST00000423251 SNAP25P60880 206 aa21.8■■□□□ 1.08
MCF2L-214ENST00000423251 TKFCQ3LXA3 575 aa21.8■■□□□ 1.08
MCF2L-214ENST00000423251 MORN1Q5T089 497 aa21.8■■□□□ 1.08
MCF2L-214ENST00000423251 WDR78Q5VTH9 848 aa21.8■■□□□ 1.08
MCF2L-214ENST00000423251 APOA5Q6Q788 366 aa21.8■■□□□ 1.08
MCF2L-214ENST00000423251 ABRAQ8N0Z2 381 aa21.8■■□□□ 1.08
MCF2L-214ENST00000423251 FANCBQ8NB91 859 aa21.8■■□□□ 1.08
MCF2L-214ENST00000423251 PXYLP1Q8TE99 480 aa21.8■■□□□ 1.08
MCF2L-214ENST00000423251 SOCS4Q8WXH5 440 aa21.8■■□□□ 1.08
MCF2L-214ENST00000423251 NUDT12Q9BQG2 462 aa21.8■■□□□ 1.08
MCF2L-214ENST00000423251 LZTS2Q9BRK4 669 aa21.8■■□□□ 1.08
MCF2L-214ENST00000423251 MYL10Q9BUA6 226 aa21.8■■□□□ 1.08
MCF2L-214ENST00000423251 HTATIP2Q9BUP3 242 aa21.8■■□□□ 1.08
MCF2L-214ENST00000423251 CPVLQ9H3G5 476 aa21.8■■□□□ 1.08
MCF2L-214ENST00000423251 BRPF3Q9ULD4 1205 aa21.8■■□□□ 1.08
MCF2L-214ENST00000423251 RIPK3Q9Y572 518 aa21.8■■□□□ 1.08
MCF2L-214ENST00000423251 IVNS1ABPQ9Y6Y0 642 aa21.8■■□□□ 1.08
MCF2L-214ENST00000423251 SGPL1O95470 568 aa21.79■■□□□ 1.08
MCF2L-214ENST00000423251 ICAM1P05362 532 aa21.79■■□□□ 1.08
MCF2L-214ENST00000423251 RCAN1P53805 252 aa21.79■■□□□ 1.08
MCF2L-214ENST00000423251 CCDC174Q6PII3 467 aa21.79■■□□□ 1.08
MCF2L-214ENST00000423251 CHST13Q8NET6 341 aa21.79■■□□□ 1.08
MCF2L-214ENST00000423251 BRF1Q92994 677 aa21.79■■□□□ 1.08
MCF2L-214ENST00000423251 AGBL1Q96MI9 1066 aa21.79■■□□□ 1.08
MCF2L-214ENST00000423251 UPF3BQ9BZI7 483 aaKnown RBP21.79■■□□□ 1.08
MCF2L-214ENST00000423251 RIOX1Q9H6W3 641 aa21.79■■□□□ 1.08
MCF2L-214ENST00000423251 JMJD4Q9H9V9 463 aa21.79■■□□□ 1.08
MCF2L-214ENST00000423251 PDRG1Q9NUG6 133 aa21.79■■□□□ 1.08
MCF2L-214ENST00000423251 PLXNB2O15031 1838 aa21.78■■□□□ 1.08
MCF2L-214ENST00000423251 KLF18A0A0U1RQI7 1052 aa21.78■■□□□ 1.08
MCF2L-214ENST00000423251 ZBTB43O43298 467 aa21.78■■□□□ 1.08
MCF2L-214ENST00000423251 EVCP57679 992 aa21.78■■□□□ 1.08
MCF2L-214ENST00000423251 GRB14Q14449 540 aa21.78■■□□□ 1.08
MCF2L-214ENST00000423251 USP6NLQ92738 828 aa21.78■■□□□ 1.08
MCF2L-214ENST00000423251 MTMR8Q96EF0 704 aa21.78■■□□□ 1.08
MCF2L-214ENST00000423251 DEFB118Q96PH6 123 aa21.78■■□□□ 1.08
MCF2L-214ENST00000423251 C22orf23Q9BZE7 217 aa21.78■■□□□ 1.08
MCF2L-214ENST00000423251 ALDH8A1Q9H2A2 487 aaPredicted RBP21.78■■□□□ 1.08
MCF2L-214ENST00000423251 UPF2Q9HAU5 1272 aaKnown RBP21.78■■□□□ 1.08
MCF2L-214ENST00000423251 VAT1LQ9HCJ6 419 aa21.78■■□□□ 1.08
MCF2L-214ENST00000423251 FBXO40Q9UH90 709 aa21.78■■□□□ 1.08
MCF2L-214ENST00000423251 ALPK3Q96L96 1907 aa21.77■■□□□ 1.08
MCF2L-214ENST00000423251 DHX16O60231 1041 aaKnown RBP21.77■■□□□ 1.08
MCF2L-214ENST00000423251 FCER1AP12319 257 aa21.77■■□□□ 1.08
MCF2L-214ENST00000423251 XRCC5P13010 732 aaKnown RBP21.77■■□□□ 1.08
MCF2L-214ENST00000423251 SLC4A3P48751 1232 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms