RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 KCTD1Q719H9 257 aa21.88■■□□□ 1.09
SREBF1-206ENST00000423161 SH3RF1Q7Z6J0 888 aa21.88■■□□□ 1.09
SREBF1-206ENST00000423161 ACAD9Q9H845 621 aa21.88■■□□□ 1.09
SREBF1-206ENST00000423161 LRRC37A2A6NM11 1700 aa21.88■■□□□ 1.09
SREBF1-206ENST00000423161 LCTP09848 1927 aa21.88■■□□□ 1.09
SREBF1-206ENST00000423161 TRIM43BA6NCK2 446 aa21.87■■□□□ 1.09
SREBF1-206ENST00000423161 ORC4O43929 436 aa21.87■■□□□ 1.09
SREBF1-206ENST00000423161 PLA2G6O60733 806 aa21.87■■□□□ 1.09
SREBF1-206ENST00000423161 ACVR2BQ13705 512 aa21.87■■□□□ 1.09
SREBF1-206ENST00000423161 RCSD1Q6JBY9 416 aa21.87■■□□□ 1.09
SREBF1-206ENST00000423161 ARMCX2Q7L311 632 aa21.87■■□□□ 1.09
SREBF1-206ENST00000423161 RASGRP2Q7LDG7 609 aa21.87■■□□□ 1.09
SREBF1-206ENST00000423161 BADQ92934 168 aa21.87■■□□□ 1.09
SREBF1-206ENST00000423161 TRIM43Q96BQ3 446 aaPredicted RBP21.87■■□□□ 1.09
SREBF1-206ENST00000423161 AGBL1Q96MI9 1066 aa21.87■■□□□ 1.09
SREBF1-206ENST00000423161 YTHDC1Q96MU7 727 aaKnown RBP21.87■■□□□ 1.09
SREBF1-206ENST00000423161 TSEN34Q9BSV6 310 aaKnown RBP21.87■■□□□ 1.09
SREBF1-206ENST00000423161 LNPKQ9C0E8 428 aa21.87■■□□□ 1.09
SREBF1-206ENST00000423161 ABHD16BQ9H3Z7 469 aa21.87■■□□□ 1.09
SREBF1-206ENST00000423161 TOMM22Q9NS69 142 aa21.87■■□□□ 1.09
SREBF1-206ENST00000423161 RNF146Q9NTX7 359 aa21.87■■□□□ 1.09
SREBF1-206ENST00000423161 MTMR7Q9Y216 660 aa21.87■■□□□ 1.09
SREBF1-206ENST00000423161 ZNF536O15090 1300 aa21.86■■□□□ 1.09
SREBF1-206ENST00000423161 DUSP11O75319 330 aaKnown RBP21.86■■□□□ 1.09
SREBF1-206ENST00000423161 ACLYP53396 1101 aa21.86■■□□□ 1.09
SREBF1-206ENST00000423161 CNTN2Q02246 1040 aa21.86■■□□□ 1.09
SREBF1-206ENST00000423161 MCMDC2Q4G0Z9 681 aa21.86■■□□□ 1.09
SREBF1-206ENST00000423161 A1CFQ9NQ94 594 aaKnown RBP21.86■■□□□ 1.09
SREBF1-206ENST00000423161 MTMR10Q9NXD2 777 aa21.86■■□□□ 1.09
SREBF1-206ENST00000423161 TRIM6-TRIM34B2RNG4 842 aa21.85■■□□□ 1.09
SREBF1-206ENST00000423161 POTEB2H3BUK9 544 aa21.85■■□□□ 1.09
SREBF1-206ENST00000423161 FGAP02671 866 aa21.85■■□□□ 1.09
SREBF1-206ENST00000423161 CLTBP09497 229 aa21.85■■□□□ 1.09
SREBF1-206ENST00000423161 ALAS1P13196 640 aa21.85■■□□□ 1.09
SREBF1-206ENST00000423161 NMIQ13287 307 aaPredicted RBP21.85■■□□□ 1.09
SREBF1-206ENST00000423161 AAMPQ13685 434 aa21.85■■□□□ 1.09
SREBF1-206ENST00000423161 CCDC96Q2M329 555 aa21.85■■□□□ 1.09
SREBF1-206ENST00000423161 TKFCQ3LXA3 575 aa21.85■■□□□ 1.09
SREBF1-206ENST00000423161 CCDC144BQ3MJ40 725 aa21.85■■□□□ 1.09
SREBF1-206ENST00000423161 CCDC174Q6PII3 467 aa21.85■■□□□ 1.09
SREBF1-206ENST00000423161 TICAM2Q86XR7 235 aa21.85■■□□□ 1.09
SREBF1-206ENST00000423161 CCDC144CPQ8IYA2 1237 aa21.85■■□□□ 1.09
SREBF1-206ENST00000423161 KLHDC9Q8NEP7 349 aa21.85■■□□□ 1.09
SREBF1-206ENST00000423161 NUP133Q8WUM0 1156 aa21.85■■□□□ 1.09
SREBF1-206ENST00000423161 STARD7Q9NQZ5 370 aa21.85■■□□□ 1.09
SREBF1-206ENST00000423161 LAMA4Q16363 1823 aa21.85■■□□□ 1.09
SREBF1-206ENST00000423161 ZMYM6O95789 1325 aa21.84■■□□□ 1.09
SREBF1-206ENST00000423161 MYADML2A6NDP7 307 aa21.84■■□□□ 1.09
SREBF1-206ENST00000423161 MOXD2PA6NHM9 499 aa21.84■■□□□ 1.09
SREBF1-206ENST00000423161 ADCY6O43306 1168 aa21.84■■□□□ 1.09
SREBF1-206ENST00000423161 PQBP1O60828 265 aaKnown RBP21.84■■□□□ 1.09
SREBF1-206ENST00000423161 FGRP09769 529 aa21.84■■□□□ 1.09
SREBF1-206ENST00000423161 SNAP25P60880 206 aa21.84■■□□□ 1.09
SREBF1-206ENST00000423161 SHHQ15465 462 aa21.84■■□□□ 1.09
SREBF1-206ENST00000423161 KCNA10Q16322 511 aa21.84■■□□□ 1.09
SREBF1-206ENST00000423161 RRP12Q5JTH9 1297 aaKnown RBP21.84■■□□□ 1.09
SREBF1-206ENST00000423161 ZNF589Q86UQ0 364 aaPredicted RBP21.84■■□□□ 1.09
SREBF1-206ENST00000423161 FAM133AQ8N9E0 248 aa21.84■■□□□ 1.09
SREBF1-206ENST00000423161 RILPL2Q969X0 211 aa21.84■■□□□ 1.09
SREBF1-206ENST00000423161 TRERF1Q96PN7 1200 aa21.84■■□□□ 1.09
SREBF1-206ENST00000423161 PRR12Q9ULL5 1215 aa21.84■■□□□ 1.09
SREBF1-206ENST00000423161 C6orf222P0C671 652 aaPredicted RBP21.83■■□□□ 1.09
SREBF1-206ENST00000423161 HSPD1P10809 573 aaKnown RBP21.83■■□□□ 1.09
SREBF1-206ENST00000423161 CST5P28325 142 aaPredicted RBP21.83■■□□□ 1.09
SREBF1-206ENST00000423161 NOVP48745 357 aa21.83■■□□□ 1.09
SREBF1-206ENST00000423161 C9orf50Q5SZB4 431 aa21.83■■□□□ 1.09
SREBF1-206ENST00000423161 CCSAPQ6IQ19 270 aaPredicted RBP21.83■■□□□ 1.09
SREBF1-206ENST00000423161 SLC17A8Q8NDX2 589 aa21.83■■□□□ 1.09
SREBF1-206ENST00000423161 DCAF4Q8WV16 495 aa21.83■■□□□ 1.09
SREBF1-206ENST00000423161 RWDD1Q9H446 243 aaPredicted RBP21.83■■□□□ 1.09
SREBF1-206ENST00000423161 SPC25Q9HBM1 224 aa21.83■■□□□ 1.09
SREBF1-206ENST00000423161 CCDC171Q6TFL3 1326 aa21.82■■□□□ 1.08
SREBF1-206ENST00000423161 IRX5P78411 483 aaPredicted RBP21.82■■□□□ 1.08
SREBF1-206ENST00000423161 B4GALNT3Q6L9W6 998 aa21.82■■□□□ 1.08
SREBF1-206ENST00000423161 SMC5Q8IY18 1101 aa21.82■■□□□ 1.08
SREBF1-206ENST00000423161 KATNBL1Q9H079 304 aa21.82■■□□□ 1.08
SREBF1-206ENST00000423161 UPF3AQ9H1J1 476 aaKnown RBP21.82■■□□□ 1.08
SREBF1-206ENST00000423161 STXBP5LQ9Y2K9 1186 aa21.82■■□□□ 1.08
SREBF1-206ENST00000423161 SOWAHBA6NEL2 793 aa21.81■■□□□ 1.08
SREBF1-206ENST00000423161 KIAA0355O15063 1070 aa21.81■■□□□ 1.08
SREBF1-206ENST00000423161 RAG1P15918 1043 aa21.81■■□□□ 1.08
SREBF1-206ENST00000423161 ITGB8P26012 769 aa21.81■■□□□ 1.08
SREBF1-206ENST00000423161 GJA9P57773 515 aa21.81■■□□□ 1.08
SREBF1-206ENST00000423161 HAND2P61296 217 aa21.81■■□□□ 1.08
SREBF1-206ENST00000423161 MUM1L1Q5H9M0 696 aa21.81■■□□□ 1.08
SREBF1-206ENST00000423161 PCSK9Q8NBP7 692 aaKnown RBP21.81■■□□□ 1.08
SREBF1-206ENST00000423161 TMEM39AQ9NV64 488 aa21.81■■□□□ 1.08
SREBF1-206ENST00000423161 CCPG1Q9ULG6 757 aa21.81■■□□□ 1.08
SREBF1-206ENST00000423161 ASB14A6NK59 587 aa21.8■■□□□ 1.08
SREBF1-206ENST00000423161 DCDC2CA8MYV0 355 aa21.8■■□□□ 1.08
SREBF1-206ENST00000423161 TOP1P11387 765 aaKnown RBP21.8■■□□□ 1.08
SREBF1-206ENST00000423161 FAM109BQ6ICB4 259 aaPredicted RBP21.8■■□□□ 1.08
SREBF1-206ENST00000423161 ANKRD33Q7Z3H0 272 aa21.8■■□□□ 1.08
SREBF1-206ENST00000423161 GLT1D1Q96MS3 346 aa21.8■■□□□ 1.08
SREBF1-206ENST00000423161 TOX2Q96NM4 488 aa21.8■■□□□ 1.08
SREBF1-206ENST00000423161 TMEM47Q9BQJ4 181 aa21.8■■□□□ 1.08
SREBF1-206ENST00000423161 ICAM1P05362 532 aa21.79■■□□□ 1.08
SREBF1-206ENST00000423161 ASGR1P07306 291 aa21.79■■□□□ 1.08
SREBF1-206ENST00000423161 SLC16A2P36021 539 aa21.79■■□□□ 1.08
SREBF1-206ENST00000423161 FAAP100Q0VG06 881 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms