RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 MYOZ2Q9NPC6 264 aa10.91□□□□□ -0.66
CMSS1-201ENST00000421999 WDR19Q8NEZ3 1342 aa10.91□□□□□ -0.66
CMSS1-201ENST00000421999 AKR1B10O60218 316 aa10.91□□□□□ -0.66
CMSS1-201ENST00000421999 CUTAO60888 179 aa10.91□□□□□ -0.66
CMSS1-201ENST00000421999 SKIDA1Q1XH10 827 aa10.91□□□□□ -0.66
CMSS1-201ENST00000421999 FNBP1Q96RU3 617 aa10.91□□□□□ -0.66
CMSS1-201ENST00000421999 PNMA3Q9UL41 463 aa10.91□□□□□ -0.66
CMSS1-201ENST00000421999 MYO6Q9UM54 1294 aa10.91□□□□□ -0.66
CMSS1-201ENST00000421999 IGSF3O75054 1194 aa10.91□□□□□ -0.66
CMSS1-201ENST00000421999 TYRO3Q06418 890 aa10.91□□□□□ -0.66
CMSS1-201ENST00000421999 GGA3Q9NZ52 723 aa10.91□□□□□ -0.66
CMSS1-201ENST00000421999 HACL1Q9UJ83 578 aa10.91□□□□□ -0.66
CMSS1-201ENST00000421999 F5H6K3 240 aa10.9□□□□□ -0.66
CMSS1-201ENST00000421999 RASA1P20936 1047 aa10.9□□□□□ -0.66
CMSS1-201ENST00000421999 KLRC3Q07444 240 aa10.9□□□□□ -0.66
CMSS1-201ENST00000421999 ANGEL2Q5VTE6 544 aaKnown RBP10.9□□□□□ -0.66
CMSS1-201ENST00000421999 NEK8Q86SG6 692 aa10.9□□□□□ -0.66
CMSS1-201ENST00000421999 RNF169Q8NCN4 708 aa10.9□□□□□ -0.66
CMSS1-201ENST00000421999 CLIC6Q96NY7 704 aa10.9□□□□□ -0.66
CMSS1-201ENST00000421999 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.9□□□□□ -0.66
CMSS1-201ENST00000421999 ADD3Q9UEY8 706 aaKnown RBP10.9□□□□□ -0.66
CMSS1-201ENST00000421999 ELP1O95163 1332 aa10.9□□□□□ -0.66
CMSS1-201ENST00000421999 ZNF202O95125 648 aa10.9□□□□□ -0.66
CMSS1-201ENST00000421999 MMP1P03956 469 aa10.9□□□□□ -0.66
CMSS1-201ENST00000421999 LMNB1P20700 586 aa10.9□□□□□ -0.66
CMSS1-201ENST00000421999 NOP2P46087 812 aaKnown RBP10.9□□□□□ -0.66
CMSS1-201ENST00000421999 UBASH3AP57075 661 aa10.9□□□□□ -0.66
CMSS1-201ENST00000421999 ARID5AQ03989 594 aa10.9□□□□□ -0.66
CMSS1-201ENST00000421999 DCAF17Q5H9S7 520 aaPredicted RBP10.9□□□□□ -0.66
CMSS1-201ENST00000421999 STAG2Q8N3U4 1231 aa10.9□□□□□ -0.66
CMSS1-201ENST00000421999 CD2APQ9Y5K6 639 aa10.9□□□□□ -0.66
CMSS1-201ENST00000421999 CAVIN2O95810 425 aa10.9□□□□□ -0.66
CMSS1-201ENST00000421999 CYP4A11Q02928 519 aa10.9□□□□□ -0.66
CMSS1-201ENST00000421999 STRN3Q13033 797 aa10.9□□□□□ -0.66
CMSS1-201ENST00000421999 PTGDRQ13258 359 aa10.9□□□□□ -0.66
CMSS1-201ENST00000421999 TAF12Q16514 161 aa10.9□□□□□ -0.66
CMSS1-201ENST00000421999 SLC51AQ86UW1 340 aa10.9□□□□□ -0.66
CMSS1-201ENST00000421999 AOPEPQ8N6M6 819 aa10.9□□□□□ -0.66
CMSS1-201ENST00000421999 AGBL3Q8NEM8 1001 aa10.9□□□□□ -0.66
CMSS1-201ENST00000421999 MTA3Q9BTC8 594 aa10.9□□□□□ -0.66
CMSS1-201ENST00000421999 FHDC1Q9C0D6 1143 aaPredicted RBP10.9□□□□□ -0.66
CMSS1-201ENST00000421999 TBC1D7Q9P0N9 293 aa10.9□□□□□ -0.66
CMSS1-201ENST00000421999 HERC5Q9UII4 1024 aaKnown RBP10.9□□□□□ -0.66
CMSS1-201ENST00000421999 FAM205AQ6ZU69 1335 aa10.9□□□□□ -0.67
CMSS1-201ENST00000421999 FOSP01100 380 aaPredicted RBP10.9□□□□□ -0.67
CMSS1-201ENST00000421999 RPL13P26373 211 aaKnown RBP10.9□□□□□ -0.67
CMSS1-201ENST00000421999 IGBP1P78318 339 aa10.9□□□□□ -0.67
CMSS1-201ENST00000421999 C9orf131Q5VYM1 1079 aa10.9□□□□□ -0.67
CMSS1-201ENST00000421999 SEPT14Q6ZU15 432 aa10.9□□□□□ -0.67
CMSS1-201ENST00000421999 PCDHA7Q9UN72 937 aa10.9□□□□□ -0.67
CMSS1-201ENST00000421999 SCN11AQ9UI33 1791 aa10.89□□□□□ -0.67
CMSS1-201ENST00000421999 USP17L10C9JJH3 530 aa10.89□□□□□ -0.67
CMSS1-201ENST00000421999 ENTPD3O75355 529 aa10.89□□□□□ -0.67
CMSS1-201ENST00000421999 SYDE2Q5VT97 1194 aa10.89□□□□□ -0.67
CMSS1-201ENST00000421999 CABP7Q86V35 215 aa10.89□□□□□ -0.67
CMSS1-201ENST00000421999 FOXP1Q9H334 677 aaPredicted RBP10.89□□□□□ -0.67
CMSS1-201ENST00000421999 ARGLU1Q9NWB6 273 aaPredicted RBP10.89□□□□□ -0.67
CMSS1-201ENST00000421999 TECP42680 631 aa10.89□□□□□ -0.67
CMSS1-201ENST00000421999 NT5C2P49902 561 aa10.89□□□□□ -0.67
CMSS1-201ENST00000421999 HDLBPQ00341 1268 aaKnown RBP10.89□□□□□ -0.67
CMSS1-201ENST00000421999 FAM83BQ5T0W9 1011 aa10.89□□□□□ -0.67
CMSS1-201ENST00000421999 CCDC84Q86UT8 332 aaPredicted RBP10.89□□□□□ -0.67
CMSS1-201ENST00000421999 MYCT1Q8N699 235 aa10.89□□□□□ -0.67
CMSS1-201ENST00000421999 ZDHHC15Q96MV8 337 aa10.89□□□□□ -0.67
CMSS1-201ENST00000421999 ALDH8A1Q9H2A2 487 aaPredicted RBP10.89□□□□□ -0.67
CMSS1-201ENST00000421999 MTMR4Q9NYA4 1195 aa10.89□□□□□ -0.67
CMSS1-201ENST00000421999 TMEM63CQ9P1W3 806 aa10.89□□□□□ -0.67
CMSS1-201ENST00000421999 CDC37Q16543 378 aaPredicted RBP10.89□□□□□ -0.67
CMSS1-201ENST00000421999 NBPF9Q3BBW0 867 aa10.89□□□□□ -0.67
CMSS1-201ENST00000421999 ADALQ6DHV7 355 aa10.89□□□□□ -0.67
CMSS1-201ENST00000421999 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.89□□□□□ -0.67
CMSS1-201ENST00000421999 C16orf86Q6ZW13 317 aa10.89□□□□□ -0.67
CMSS1-201ENST00000421999 APBB1IPQ7Z5R6 666 aaPredicted RBP10.89□□□□□ -0.67
CMSS1-201ENST00000421999 FAM151AQ8WW52 585 aa10.89□□□□□ -0.67
CMSS1-201ENST00000421999 PCDHA4Q9UN74 947 aa10.89□□□□□ -0.67
CMSS1-201ENST00000421999 USO1O60763 962 aaKnown RBP10.88□□□□□ -0.67
CMSS1-201ENST00000421999 ERCC3P19447 782 aa10.88□□□□□ -0.67
CMSS1-201ENST00000421999 DACT2Q5SW24 774 aa10.88□□□□□ -0.67
CMSS1-201ENST00000421999 NBPF3Q9H094 633 aa10.88□□□□□ -0.67
CMSS1-201ENST00000421999 DEFB129Q9H1M3 183 aa10.88□□□□□ -0.67
CMSS1-201ENST00000421999 BICDL2A1A5D9 508 aa10.88□□□□□ -0.67
CMSS1-201ENST00000421999 NR1I2O75469 434 aa10.88□□□□□ -0.67
CMSS1-201ENST00000421999 XKR9Q5GH70 373 aa10.88□□□□□ -0.67
CMSS1-201ENST00000421999 MCTP2Q6DN12 878 aa10.88□□□□□ -0.67
CMSS1-201ENST00000421999 GALNT17Q6IS24 598 aa10.88□□□□□ -0.67
CMSS1-201ENST00000421999 FAM200AQ8TCP9 573 aa10.88□□□□□ -0.67
CMSS1-201ENST00000421999 TBC1D5Q92609 795 aa10.88□□□□□ -0.67
CMSS1-201ENST00000421999 EIF2AK2P19525 551 aaKnown RBP10.88□□□□□ -0.67
CMSS1-201ENST00000421999 GUCY1A2P33402 732 aa10.88□□□□□ -0.67
CMSS1-201ENST00000421999 TNNT3P45378 269 aaPredicted RBP10.88□□□□□ -0.67
CMSS1-201ENST00000421999 RESTQ13127 1097 aa10.88□□□□□ -0.67
CMSS1-201ENST00000421999 UBE2SQ16763 222 aa10.88□□□□□ -0.67
CMSS1-201ENST00000421999 OTUD6AQ7L8S5 288 aa10.88□□□□□ -0.67
CMSS1-201ENST00000421999 FAM160B2Q86V87 743 aa10.88□□□□□ -0.67
CMSS1-201ENST00000421999 AP5M1Q9H0R1 490 aa10.88□□□□□ -0.67
CMSS1-201ENST00000421999 FRMD4BQ9Y2L6 1034 aa10.88□□□□□ -0.67
CMSS1-201ENST00000421999 SALL1Q9NSC2 1324 aa10.88□□□□□ -0.67
CMSS1-201ENST00000421999 ANKRD62A6NC57 917 aa10.88□□□□□ -0.67
CMSS1-201ENST00000421999 Q3C1V9 767 aa10.88□□□□□ -0.67
CMSS1-201ENST00000421999 CERS5Q8N5B7 392 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms