RNA–Protein interactions for RNA: ENST00000420042.1

RARA-205, Transcript of retinoic acid receptor alpha, humanhuman

TSL 3

Gene RARA, Length 1,052 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-205ENST00000420042 ZMYM6O95789 1325 aa17.85■□□□□ 0.45
RARA-205ENST00000420042 SDSP20132 328 aa17.85■□□□□ 0.45
RARA-205ENST00000420042 NUCB1Q02818 461 aa17.85■□□□□ 0.45
RARA-205ENST00000420042 CCDC96Q2M329 555 aa17.85■□□□□ 0.45
RARA-205ENST00000420042 TKFCQ3LXA3 575 aa17.85■□□□□ 0.45
RARA-205ENST00000420042 LRIT3Q3SXY7 679 aa17.85■□□□□ 0.45
RARA-205ENST00000420042 TRIM60Q495X7 471 aa17.85■□□□□ 0.45
RARA-205ENST00000420042 PLEKHM2Q8IWE5 1019 aa17.85■□□□□ 0.45
RARA-205ENST00000420042 AGBL1Q96MI9 1066 aa17.85■□□□□ 0.45
RARA-205ENST00000420042 PRDM5Q9NQX1 630 aaPredicted RBP17.85■□□□□ 0.45
RARA-205ENST00000420042 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.85■□□□□ 0.45
RARA-205ENST00000420042 ZNFX1Q9P2E3 1918 aaKnown RBP17.85■□□□□ 0.45
RARA-205ENST00000420042 ZNF536O15090 1300 aa17.84■□□□□ 0.45
RARA-205ENST00000420042 POTEB2H3BUK9 544 aa17.84■□□□□ 0.45
RARA-205ENST00000420042 TOP1P11387 765 aaKnown RBP17.84■□□□□ 0.45
RARA-205ENST00000420042 ALAS1P13196 640 aa17.84■□□□□ 0.45
RARA-205ENST00000420042 HAND2P61296 217 aa17.84■□□□□ 0.45
RARA-205ENST00000420042 ACVR2BQ13705 512 aa17.84■□□□□ 0.45
RARA-205ENST00000420042 SNX17Q15036 470 aa17.84■□□□□ 0.45
RARA-205ENST00000420042 C1orf53Q5VUE5 145 aa17.84■□□□□ 0.45
RARA-205ENST00000420042 CCDC174Q6PII3 467 aa17.84■□□□□ 0.45
RARA-205ENST00000420042 DCAF4Q8WV16 495 aa17.84■□□□□ 0.45
RARA-205ENST00000420042 LENG1Q96BZ8 264 aaPredicted RBP17.84■□□□□ 0.45
RARA-205ENST00000420042 TRERF1Q96PN7 1200 aa17.84■□□□□ 0.45
RARA-205ENST00000420042 ABHD16BQ9H3Z7 469 aa17.84■□□□□ 0.45
RARA-205ENST00000420042 OSBPL3Q9H4L5 887 aa17.84■□□□□ 0.45
RARA-205ENST00000420042 RNF146Q9NTX7 359 aa17.84■□□□□ 0.45
RARA-205ENST00000420042 PRR12Q9ULL5 1215 aa17.84■□□□□ 0.45
RARA-205ENST00000420042 NOVP48745 357 aa17.83■□□□□ 0.44
RARA-205ENST00000420042 MFSD6Q6ZSS7 791 aa17.83■□□□□ 0.44
RARA-205ENST00000420042 RNF41Q9H4P4 317 aaPredicted RBP17.83■□□□□ 0.44
RARA-205ENST00000420042 DIAPH3Q9NSV4 1193 aa17.83■□□□□ 0.44
RARA-205ENST00000420042 TCP11L1Q9NUJ3 509 aa17.83■□□□□ 0.44
RARA-205ENST00000420042 PLXNA1Q9UIW2 1896 aa17.82■□□□□ 0.44
RARA-205ENST00000420042 ADAMTS4O75173 837 aa17.82■□□□□ 0.44
RARA-205ENST00000420042 PCP11498 1178 aaKnown RBP17.82■□□□□ 0.44
RARA-205ENST00000420042 SNAP25P60880 206 aa17.82■□□□□ 0.44
RARA-205ENST00000420042 CNTN2Q02246 1040 aa17.82■□□□□ 0.44
RARA-205ENST00000420042 AKNAD1Q5T1N1 836 aa17.82■□□□□ 0.44
RARA-205ENST00000420042 GPR153Q6NV75 609 aa17.82■□□□□ 0.44
RARA-205ENST00000420042 CWC27Q6UX04 472 aaKnown RBP17.82■□□□□ 0.44
RARA-205ENST00000420042 ARMCX2Q7L311 632 aa17.82■□□□□ 0.44
RARA-205ENST00000420042 RASGRP2Q7LDG7 609 aa17.82■□□□□ 0.44
RARA-205ENST00000420042 CCDC144CPQ8IYA2 1237 aa17.82■□□□□ 0.44
RARA-205ENST00000420042 TMEM47Q9BQJ4 181 aa17.82■□□□□ 0.44
RARA-205ENST00000420042 TSEN34Q9BSV6 310 aaKnown RBP17.82■□□□□ 0.44
RARA-205ENST00000420042 SPC25Q9HBM1 224 aa17.82■□□□□ 0.44
RARA-205ENST00000420042 A1CFQ9NQ94 594 aaKnown RBP17.82■□□□□ 0.44
RARA-205ENST00000420042 SYNRGQ9UMZ2 1314 aa17.81■□□□□ 0.44
RARA-205ENST00000420042 A0A1W2PQ45 241 aaPredicted RBP17.81■□□□□ 0.44
RARA-205ENST00000420042 A0A1W2PQY0 241 aa17.81■□□□□ 0.44
RARA-205ENST00000420042 HIP1O00291 1037 aa17.81■□□□□ 0.44
RARA-205ENST00000420042 DUSP11O75319 330 aaKnown RBP17.81■□□□□ 0.44
RARA-205ENST00000420042 TLE2Q04725 743 aa17.81■□□□□ 0.44
RARA-205ENST00000420042 FAM133AQ8N9E0 248 aa17.81■□□□□ 0.44
RARA-205ENST00000420042 NUP133Q8WUM0 1156 aa17.81■□□□□ 0.44
RARA-205ENST00000420042 FGD4Q96M96 766 aa17.81■□□□□ 0.44
RARA-205ENST00000420042 CCPG1Q9ULG6 757 aa17.81■□□□□ 0.44
RARA-205ENST00000420042 FRMPD2Q68DX3 1309 aaPredicted RBP17.8■□□□□ 0.44
RARA-205ENST00000420042 MOXD2PA6NHM9 499 aa17.8■□□□□ 0.44
RARA-205ENST00000420042 ASB14A6NK59 587 aa17.8■□□□□ 0.44
RARA-205ENST00000420042 ZNF213O14771 459 aa17.8■□□□□ 0.44
RARA-205ENST00000420042 ICAM1P05362 532 aa17.8■□□□□ 0.44
RARA-205ENST00000420042 SLC16A2P36021 539 aa17.8■□□□□ 0.44
RARA-205ENST00000420042 ACLYP53396 1101 aa17.8■□□□□ 0.44
RARA-205ENST00000420042 KCNA10Q16322 511 aa17.8■□□□□ 0.44
RARA-205ENST00000420042 CCDC144BQ3MJ40 725 aa17.8■□□□□ 0.44
RARA-205ENST00000420042 TTBK2Q6IQ55 1244 aa17.8■□□□□ 0.44
RARA-205ENST00000420042 ESR2Q92731 530 aa17.8■□□□□ 0.44
RARA-205ENST00000420042 TTC14Q96N46 770 aa17.8■□□□□ 0.44
RARA-205ENST00000420042 GPCPD1Q9NPB8 672 aa17.8■□□□□ 0.44
RARA-205ENST00000420042 STARD7Q9NQZ5 370 aa17.8■□□□□ 0.44
RARA-205ENST00000420042 PDLIM7Q9NR12 457 aa17.8■□□□□ 0.44
RARA-205ENST00000420042 SUPT16HQ9Y5B9 1047 aaKnown RBP17.8■□□□□ 0.44
RARA-205ENST00000420042 RANBP2P49792 3224 aaKnown RBP17.79■□□□□ 0.44
RARA-205ENST00000420042 CLTBP09497 229 aa17.79■□□□□ 0.44
RARA-205ENST00000420042 C6orf222P0C671 652 aaPredicted RBP17.79■□□□□ 0.44
RARA-205ENST00000420042 SYDE2Q5VT97 1194 aa17.79■□□□□ 0.44
RARA-205ENST00000420042 NSMFQ6X4W1 530 aa17.79■□□□□ 0.44
RARA-205ENST00000420042 NOL8Q76FK4 1167 aaKnown RBP17.79■□□□□ 0.44
RARA-205ENST00000420042 TBC1D10CQ8IV04 446 aa17.79■□□□□ 0.44
RARA-205ENST00000420042 PCSK9Q8NBP7 692 aaKnown RBP17.79■□□□□ 0.44
RARA-205ENST00000420042 KLHDC9Q8NEP7 349 aa17.79■□□□□ 0.44
RARA-205ENST00000420042 BADQ92934 168 aa17.79■□□□□ 0.44
RARA-205ENST00000420042 RANBP17Q9H2T7 1088 aaKnown RBP17.79■□□□□ 0.44
RARA-205ENST00000420042 TRIM43BA6NCK2 446 aa17.78■□□□□ 0.44
RARA-205ENST00000420042 SOWAHBA6NEL2 793 aa17.78■□□□□ 0.44
RARA-205ENST00000420042 PQBP1O60828 265 aaKnown RBP17.78■□□□□ 0.44
RARA-205ENST00000420042 MUM1L1Q5H9M0 696 aa17.78■□□□□ 0.44
RARA-205ENST00000420042 BTNL9Q6UXG8 535 aa17.78■□□□□ 0.44
RARA-205ENST00000420042 SH3RF1Q7Z6J0 888 aa17.78■□□□□ 0.44
RARA-205ENST00000420042 DEFB123Q8N688 67 aa17.78■□□□□ 0.44
RARA-205ENST00000420042 VTI1AQ96AJ9 217 aa17.78■□□□□ 0.44
RARA-205ENST00000420042 TRIM43Q96BQ3 446 aaPredicted RBP17.78■□□□□ 0.44
RARA-205ENST00000420042 GLT1D1Q96MS3 346 aa17.78■□□□□ 0.44
RARA-205ENST00000420042 CYP39A1Q9NYL5 469 aa17.78■□□□□ 0.44
RARA-205ENST00000420042 MYADML2A6NDP7 307 aa17.77■□□□□ 0.44
RARA-205ENST00000420042 DCDC2CA8MYV0 355 aa17.77■□□□□ 0.44
RARA-205ENST00000420042 PDHBP11177 359 aa17.77■□□□□ 0.44
RARA-205ENST00000420042 CST5P28325 142 aaPredicted RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms