RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 FAM204AQ9H8W3 233 aa17.01■□□□□ 0.31
SEMA3B-203ENST00000419007 DCP1AQ9NPI6 582 aaPredicted RBP17.01■□□□□ 0.31
SEMA3B-203ENST00000419007 FAM98CQ17RN3 349 aaKnown RBP17.01■□□□□ 0.31
SEMA3B-203ENST00000419007 CCDC178Q5BJE1 867 aa17.01■□□□□ 0.31
SEMA3B-203ENST00000419007 PSD3Q9NYI0 1048 aa17.01■□□□□ 0.31
SEMA3B-203ENST00000419007 PRDX5P30044 214 aa17■□□□□ 0.31
SEMA3B-203ENST00000419007 HERVK_113P62684 666 aa17■□□□□ 0.31
SEMA3B-203ENST00000419007 TBC1D8BQ0IIM8 1120 aa17■□□□□ 0.31
SEMA3B-203ENST00000419007 ERFEQ4G0M1 354 aa17■□□□□ 0.31
SEMA3B-203ENST00000419007 DRC1Q96MC2 740 aa17■□□□□ 0.31
SEMA3B-203ENST00000419007 PLEKHA4Q9H4M7 779 aa17■□□□□ 0.31
SEMA3B-203ENST00000419007 MYO1CO00159 1063 aa17■□□□□ 0.31
SEMA3B-203ENST00000419007 ZNF185O15231 689 aa17■□□□□ 0.31
SEMA3B-203ENST00000419007 FOXR1Q6PIV2 292 aa17■□□□□ 0.31
SEMA3B-203ENST00000419007 DUSP10Q9Y6W6 482 aa17■□□□□ 0.31
SEMA3B-203ENST00000419007 COL1A1P02452 1464 aaPredicted RBP16.99■□□□□ 0.31
SEMA3B-203ENST00000419007 ANKRD36CQ5JPF3 1778 aa16.99■□□□□ 0.31
SEMA3B-203ENST00000419007 ITGB4P16144 1822 aa16.99■□□□□ 0.31
SEMA3B-203ENST00000419007 KRT86O43790 486 aa16.99■□□□□ 0.31
SEMA3B-203ENST00000419007 MTIF2P46199 727 aaKnown RBP16.99■□□□□ 0.31
SEMA3B-203ENST00000419007 TFAP4Q01664 338 aa16.99■□□□□ 0.31
SEMA3B-203ENST00000419007 ARL6IP4Q66PJ3 421 aaKnown RBP16.99■□□□□ 0.31
SEMA3B-203ENST00000419007 WDR59Q6PJI9 974 aa16.99■□□□□ 0.31
SEMA3B-203ENST00000419007 TRAPPC11Q7Z392 1133 aa16.99■□□□□ 0.31
SEMA3B-203ENST00000419007 TUBGCP2Q9BSJ2 902 aa16.99■□□□□ 0.31
SEMA3B-203ENST00000419007 LACRTQ9GZZ8 138 aa16.99■□□□□ 0.31
SEMA3B-203ENST00000419007 ZNF804BA4D1E1 1349 aa16.99■□□□□ 0.31
SEMA3B-203ENST00000419007 USP17L8P0C7I0 530 aa16.99■□□□□ 0.31
SEMA3B-203ENST00000419007 KRT83P78385 493 aa16.99■□□□□ 0.31
SEMA3B-203ENST00000419007 NAALADL2Q58DX5 795 aa16.99■□□□□ 0.31
SEMA3B-203ENST00000419007 FAM71BQ8TC56 605 aa16.99■□□□□ 0.31
SEMA3B-203ENST00000419007 RIN2Q8WYP3 895 aaPredicted RBP16.99■□□□□ 0.31
SEMA3B-203ENST00000419007 TULP1O00294 542 aaPredicted RBP16.99■□□□□ 0.31
SEMA3B-203ENST00000419007 UBE4AQ14139 1066 aa16.99■□□□□ 0.31
SEMA3B-203ENST00000419007 CCDC24Q8N4L8 307 aa16.99■□□□□ 0.31
SEMA3B-203ENST00000419007 PNMA1Q8ND90 353 aa16.99■□□□□ 0.31
SEMA3B-203ENST00000419007 NSUN4Q96CB9 384 aaKnown RBP16.99■□□□□ 0.31
SEMA3B-203ENST00000419007 RSPH14Q9UHP6 348 aa16.99■□□□□ 0.31
SEMA3B-203ENST00000419007 PCDHA4Q9UN74 947 aa16.99■□□□□ 0.31
SEMA3B-203ENST00000419007 MINPP1Q9UNW1 487 aa16.99■□□□□ 0.31
SEMA3B-203ENST00000419007 BCORQ6W2J9 1755 aa16.98■□□□□ 0.31
SEMA3B-203ENST00000419007 RNF40O75150 1001 aa16.98■□□□□ 0.31
SEMA3B-203ENST00000419007 IDEP14735 1019 aa16.98■□□□□ 0.31
SEMA3B-203ENST00000419007 ERCC3P19447 782 aa16.98■□□□□ 0.31
SEMA3B-203ENST00000419007 EEF1GP26641 437 aaKnown RBP16.98■□□□□ 0.31
SEMA3B-203ENST00000419007 CYLC1P35663 651 aaPredicted RBP16.98■□□□□ 0.31
SEMA3B-203ENST00000419007 USP14P54578 494 aa16.98■□□□□ 0.31
SEMA3B-203ENST00000419007 FAM182BQ5T319 152 aa16.98■□□□□ 0.31
SEMA3B-203ENST00000419007 TYW1BQ6NUM6 668 aa16.98■□□□□ 0.31
SEMA3B-203ENST00000419007 CELF1Q92879 486 aaKnown RBP16.98■□□□□ 0.31
SEMA3B-203ENST00000419007 CAPN11Q9UMQ6 739 aa16.98■□□□□ 0.31
SEMA3B-203ENST00000419007 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.98■□□□□ 0.31
SEMA3B-203ENST00000419007 RRP15Q9Y3B9 282 aaKnown RBP16.98■□□□□ 0.31
SEMA3B-203ENST00000419007 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.98■□□□□ 0.31
SEMA3B-203ENST00000419007 LOC102724428A0A0B4J2F2 783 aa16.98■□□□□ 0.31
SEMA3B-203ENST00000419007 RCCD1A6NED2 376 aa16.98■□□□□ 0.31
SEMA3B-203ENST00000419007 ANKRD65E5RJM6 399 aa16.98■□□□□ 0.31
SEMA3B-203ENST00000419007 PSMD14O00487 310 aa16.98■□□□□ 0.31
SEMA3B-203ENST00000419007 TUBBP07437 444 aa16.98■□□□□ 0.31
SEMA3B-203ENST00000419007 SIK1P57059 783 aa16.98■□□□□ 0.31
SEMA3B-203ENST00000419007 C4orf32Q8N8J7 132 aa16.98■□□□□ 0.31
SEMA3B-203ENST00000419007 DNAJC7Q99615 494 aa16.98■□□□□ 0.31
SEMA3B-203ENST00000419007 RASSF4Q9H2L5 321 aa16.98■□□□□ 0.31
SEMA3B-203ENST00000419007 EXOC1Q9NV70 894 aa16.98■□□□□ 0.31
SEMA3B-203ENST00000419007 STX8Q9UNK0 236 aa16.98■□□□□ 0.31
SEMA3B-203ENST00000419007 DUOX1Q9NRD9 1551 aa16.98■□□□□ 0.31
SEMA3B-203ENST00000419007 AHDC1Q5TGY3 1603 aaPredicted RBP16.97■□□□□ 0.31
SEMA3B-203ENST00000419007 PCP11498 1178 aaKnown RBP16.97■□□□□ 0.31
SEMA3B-203ENST00000419007 DNM2P50570 870 aa16.97■□□□□ 0.31
SEMA3B-203ENST00000419007 PDE4DQ08499 809 aa16.97■□□□□ 0.31
SEMA3B-203ENST00000419007 SMIM5Q71RC9 77 aa16.97■□□□□ 0.31
SEMA3B-203ENST00000419007 DYNLL2Q96FJ2 89 aa16.97■□□□□ 0.31
SEMA3B-203ENST00000419007 CPVLQ9H3G5 476 aa16.97■□□□□ 0.31
SEMA3B-203ENST00000419007 NHEJ1Q9H9Q4 299 aaPredicted RBP16.97■□□□□ 0.31
SEMA3B-203ENST00000419007 ORC4O43929 436 aa16.97■□□□□ 0.31
SEMA3B-203ENST00000419007 ASIC1P78348 528 aa16.97■□□□□ 0.31
SEMA3B-203ENST00000419007 MRPS25P82663 173 aaKnown RBP16.97■□□□□ 0.31
SEMA3B-203ENST00000419007 ITPK1Q13572 414 aa16.97■□□□□ 0.31
SEMA3B-203ENST00000419007 TSPYL1Q9H0U9 437 aa16.97■□□□□ 0.31
SEMA3B-203ENST00000419007 MKNK2Q9HBH9 465 aa16.97■□□□□ 0.31
SEMA3B-203ENST00000419007 USP21Q9UK80 565 aa16.97■□□□□ 0.31
SEMA3B-203ENST00000419007 LRP5O75197 1615 aa16.97■□□□□ 0.31
SEMA3B-203ENST00000419007 GOLGA8HP0CJ92 632 aa16.97■□□□□ 0.31
SEMA3B-203ENST00000419007 MATR3P43243 847 aaKnown RBP eCLIP16.97■□□□□ 0.31
SEMA3B-203ENST00000419007 MAP9Q49MG5 647 aa16.97■□□□□ 0.31
SEMA3B-203ENST00000419007 RCSD1Q6JBY9 416 aa16.97■□□□□ 0.31
SEMA3B-203ENST00000419007 WDR93Q6P2C0 686 aa16.97■□□□□ 0.31
SEMA3B-203ENST00000419007 HPS3Q969F9 1004 aa16.97■□□□□ 0.31
SEMA3B-203ENST00000419007 PSMB7Q99436 277 aa16.97■□□□□ 0.31
SEMA3B-203ENST00000419007 CRACR2AQ9BSW2 395 aa16.97■□□□□ 0.31
SEMA3B-203ENST00000419007 PDS5AQ29RF7 1337 aaKnown RBP16.96■□□□□ 0.31
SEMA3B-203ENST00000419007 CCDC96Q2M329 555 aa16.96■□□□□ 0.31
SEMA3B-203ENST00000419007 KRT26Q7Z3Y9 468 aa16.96■□□□□ 0.31
SEMA3B-203ENST00000419007 ZNF507Q8TCN5 953 aa16.96■□□□□ 0.31
SEMA3B-203ENST00000419007 SMCR8Q8TEV9 937 aaPredicted RBP16.96■□□□□ 0.31
SEMA3B-203ENST00000419007 NOC4LQ9BVI4 516 aaKnown RBP16.96■□□□□ 0.31
SEMA3B-203ENST00000419007 THAP9Q9H5L6 903 aa16.96■□□□□ 0.31
SEMA3B-203ENST00000419007 ARAP2Q8WZ64 1704 aa16.96■□□□□ 0.31
SEMA3B-203ENST00000419007 CICQ96RK0 1608 aaPredicted RBP16.96■□□□□ 0.31
SEMA3B-203ENST00000419007 USP17L3A6NCW0 530 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms