RNA–Protein interactions for RNA: ENST00000417709.5

TTC38-202, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-202ENST00000417709 AKNAD1Q5T1N1 836 aa17.02■□□□□ 0.32
TTC38-202ENST00000417709 RASIP1Q5U651 963 aa17.02■□□□□ 0.32
TTC38-202ENST00000417709 HAUS7Q99871 368 aa17.02■□□□□ 0.32
TTC38-202ENST00000417709 TLR3O15455 904 aaKnown RBP17.01■□□□□ 0.31
TTC38-202ENST00000417709 FGBP02675 491 aa17.01■□□□□ 0.31
TTC38-202ENST00000417709 MRPS5P82675 430 aaKnown RBP17.01■□□□□ 0.31
TTC38-202ENST00000417709 ZNF467Q7Z7K2 595 aaPredicted RBP17.01■□□□□ 0.31
TTC38-202ENST00000417709 SIRT2Q8IXJ6 389 aa17.01■□□□□ 0.31
TTC38-202ENST00000417709 RPAP2Q8IXW5 612 aaPredicted RBP17.01■□□□□ 0.31
TTC38-202ENST00000417709 ADAMTS19Q8TE59 1207 aa17.01■□□□□ 0.31
TTC38-202ENST00000417709 IL23AQ9NPF7 189 aa17.01■□□□□ 0.31
TTC38-202ENST00000417709 CXXC1Q9P0U4 656 aaPredicted RBP17.01■□□□□ 0.31
TTC38-202ENST00000417709 NYAP2Q9P242 653 aa17.01■□□□□ 0.31
TTC38-202ENST00000417709 ROBO3Q96MS0 1386 aa17.01■□□□□ 0.31
TTC38-202ENST00000417709 RAB11FIP3O75154 756 aa17■□□□□ 0.31
TTC38-202ENST00000417709 HMMRO75330 724 aa17■□□□□ 0.31
TTC38-202ENST00000417709 RASA1P20936 1047 aa17■□□□□ 0.31
TTC38-202ENST00000417709 CST5P28325 142 aaPredicted RBP17■□□□□ 0.31
TTC38-202ENST00000417709 CNTN2Q02246 1040 aa17■□□□□ 0.31
TTC38-202ENST00000417709 PSRC1Q6PGN9 363 aaPredicted RBP17■□□□□ 0.31
TTC38-202ENST00000417709 ARMCX2Q7L311 632 aa17■□□□□ 0.31
TTC38-202ENST00000417709 OTOP2Q7RTS6 562 aa17■□□□□ 0.31
TTC38-202ENST00000417709 FAM126BQ8IXS8 530 aa17■□□□□ 0.31
TTC38-202ENST00000417709 CCDC144CPQ8IYA2 1237 aa17■□□□□ 0.31
TTC38-202ENST00000417709 CHMP4CQ96CF2 233 aa17■□□□□ 0.31
TTC38-202ENST00000417709 UPF3AQ9H1J1 476 aaKnown RBP17■□□□□ 0.31
TTC38-202ENST00000417709 NKX2-4Q9H2Z4 354 aa17■□□□□ 0.31
TTC38-202ENST00000417709 SLC28A3Q9HAS3 691 aa17■□□□□ 0.31
TTC38-202ENST00000417709 HOMER2Q9NSB8 354 aa17■□□□□ 0.31
TTC38-202ENST00000417709 THEGQ9P2T0 379 aa17■□□□□ 0.31
TTC38-202ENST00000417709 ATP2A1O14983 1001 aa16.99■□□□□ 0.31
TTC38-202ENST00000417709 CTAGE5O15320 804 aa16.99■□□□□ 0.31
TTC38-202ENST00000417709 HNRNPUQ00839 825 aaKnown RBP eCLIP16.99■□□□□ 0.31
TTC38-202ENST00000417709 TNFAIP2Q03169 654 aa16.99■□□□□ 0.31
TTC38-202ENST00000417709 ZSCAN25Q6NSZ9 544 aa16.99■□□□□ 0.31
TTC38-202ENST00000417709 CXCL17Q6UXB2 119 aa16.99■□□□□ 0.31
TTC38-202ENST00000417709 IL27Q8NEV9 243 aa16.99■□□□□ 0.31
TTC38-202ENST00000417709 HERVK_113Q902F9 699 aa16.99■□□□□ 0.31
TTC38-202ENST00000417709 FGD4Q96M96 766 aa16.99■□□□□ 0.31
TTC38-202ENST00000417709 STRBPQ96SI9 672 aaKnown RBP16.99■□□□□ 0.31
TTC38-202ENST00000417709 SLC38A10Q9HBR0 1119 aa16.99■□□□□ 0.31
TTC38-202ENST00000417709 MYH7P12883 1935 aa16.98■□□□□ 0.31
TTC38-202ENST00000417709 MYH4Q9Y623 1939 aa16.98■□□□□ 0.31
TTC38-202ENST00000417709 GSG1L2A8MUP6 293 aa16.98■□□□□ 0.31
TTC38-202ENST00000417709 CD4P01730 458 aa16.98■□□□□ 0.31
TTC38-202ENST00000417709 CCL23P55773 120 aa16.98■□□□□ 0.31
TTC38-202ENST00000417709 RAB30Q15771 203 aa16.98■□□□□ 0.31
TTC38-202ENST00000417709 ZNF444Q8N0Y2 327 aaPredicted RBP16.98■□□□□ 0.31
TTC38-202ENST00000417709 CHST13Q8NET6 341 aa16.98■□□□□ 0.31
TTC38-202ENST00000417709 UHRF1Q96T88 793 aaPredicted RBP16.98■□□□□ 0.31
TTC38-202ENST00000417709 TRPV6Q9H1D0 765 aa16.98■□□□□ 0.31
TTC38-202ENST00000417709 ARPP21Q9UBL0 812 aaPredicted RBP16.98■□□□□ 0.31
TTC38-202ENST00000417709 FBXO40Q9UH90 709 aa16.98■□□□□ 0.31
TTC38-202ENST00000417709 FEM1BQ9UK73 627 aa16.98■□□□□ 0.31
TTC38-202ENST00000417709 ISY1Q9ULR0 285 aaKnown RBP16.98■□□□□ 0.31
TTC38-202ENST00000417709 GBF1Q92538 1859 aa16.98■□□□□ 0.31
TTC38-202ENST00000417709 PRRC2BQ5JSZ5 2229 aaKnown RBP16.98■□□□□ 0.31
TTC38-202ENST00000417709 ZBED9Q6R2W3 1325 aa16.97■□□□□ 0.31
TTC38-202ENST00000417709 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.97■□□□□ 0.31
TTC38-202ENST00000417709 DYNC1LI2O43237 492 aaPredicted RBP16.97■□□□□ 0.31
TTC38-202ENST00000417709 PRDM1O75626 825 aa16.97■□□□□ 0.31
TTC38-202ENST00000417709 RABGGTBP53611 331 aa16.97■□□□□ 0.31
TTC38-202ENST00000417709 SBK1Q52WX2 424 aa16.97■□□□□ 0.31
TTC38-202ENST00000417709 MICALL1Q8N3F8 863 aa16.97■□□□□ 0.31
TTC38-202ENST00000417709 AP5M1Q9H0R1 490 aa16.97■□□□□ 0.31
TTC38-202ENST00000417709 HIPK3Q9H422 1215 aa16.97■□□□□ 0.31
TTC38-202ENST00000417709 YBX2Q9Y2T7 364 aaKnown RBP16.97■□□□□ 0.31
TTC38-202ENST00000417709 UMODL1Q5DID0 1318 aa16.96■□□□□ 0.31
TTC38-202ENST00000417709 SMARCA5O60264 1052 aaPredicted RBP16.96■□□□□ 0.31
TTC38-202ENST00000417709 MYOGP15173 224 aa16.96■□□□□ 0.31
TTC38-202ENST00000417709 PTGS1P23219 599 aa16.96■□□□□ 0.31
TTC38-202ENST00000417709 ITGA7Q13683 1181 aa16.96■□□□□ 0.31
TTC38-202ENST00000417709 MKL1Q969V6 931 aa16.96■□□□□ 0.31
TTC38-202ENST00000417709 KATNBL1Q9H079 304 aa16.96■□□□□ 0.31
TTC38-202ENST00000417709 MTIF3Q9H2K0 278 aaKnown RBP16.96■□□□□ 0.31
TTC38-202ENST00000417709 COG6Q9Y2V7 657 aa16.96■□□□□ 0.31
TTC38-202ENST00000417709 DDX49Q9Y6V7 483 aaKnown RBP16.96■□□□□ 0.31
TTC38-202ENST00000417709 ASTN1O14525 1302 aa16.96■□□□□ 0.3
TTC38-202ENST00000417709 TMEM232C9JQI7 657 aa16.95■□□□□ 0.3
TTC38-202ENST00000417709 APPP05067 770 aa16.95■□□□□ 0.3
TTC38-202ENST00000417709 SLFN13Q68D06 897 aa16.95■□□□□ 0.3
TTC38-202ENST00000417709 LRRC47Q8N1G4 583 aaKnown RBP16.95■□□□□ 0.3
TTC38-202ENST00000417709 CEP95Q96GE4 821 aa16.95■□□□□ 0.3
TTC38-202ENST00000417709 AGBL1Q96MI9 1066 aa16.95■□□□□ 0.3
TTC38-202ENST00000417709 NECAB3Q96P71 396 aaPredicted RBP16.95■□□□□ 0.3
TTC38-202ENST00000417709 TSPYL2Q9H2G4 693 aaPredicted RBP16.95■□□□□ 0.3
TTC38-202ENST00000417709 ZBTB40Q9NUA8 1239 aa16.95■□□□□ 0.3
TTC38-202ENST00000417709 MTMR4Q9NYA4 1195 aa16.95■□□□□ 0.3
TTC38-202ENST00000417709 SLC4A7Q9Y6M7 1214 aa16.95■□□□□ 0.3
TTC38-202ENST00000417709 GRIN2DO15399 1336 aa16.95■□□□□ 0.3
TTC38-202ENST00000417709 SOWAHBA6NEL2 793 aa16.94■□□□□ 0.3
TTC38-202ENST00000417709 MS4A1P11836 297 aa16.94■□□□□ 0.3
TTC38-202ENST00000417709 BMP3P12645 472 aa16.94■□□□□ 0.3
TTC38-202ENST00000417709 PSMC6P62333 389 aa16.94■□□□□ 0.3
TTC38-202ENST00000417709 FSCN1Q16658 493 aaKnown RBP16.94■□□□□ 0.3
TTC38-202ENST00000417709 TMEM63BQ5T3F8 832 aa16.94■□□□□ 0.3
TTC38-202ENST00000417709 EEPD1Q7L9B9 569 aa16.94■□□□□ 0.3
TTC38-202ENST00000417709 RPUSD2Q8IZ73 545 aaKnown RBP16.94■□□□□ 0.3
TTC38-202ENST00000417709 FAM133AQ8N9E0 248 aa16.94■□□□□ 0.3
TTC38-202ENST00000417709 SLC43A3Q8NBI5 491 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms