RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 MTIF3Q9H2K0 278 aaKnown RBP16.56■□□□□ 0.24
SSB-204ENST00000417292 ABHD16BQ9H3Z7 469 aa16.56■□□□□ 0.24
SSB-204ENST00000417292 HIPK3Q9H422 1215 aa16.56■□□□□ 0.24
SSB-204ENST00000417292 EPHX3Q9H6B9 360 aa16.56■□□□□ 0.24
SSB-204ENST00000417292 IL1RAPL2Q9NP60 686 aa16.56■□□□□ 0.24
SSB-204ENST00000417292 ATP8A2Q9NTI2 1148 aa16.56■□□□□ 0.24
SSB-204ENST00000417292 USP17L12C9JPN9 530 aa16.55■□□□□ 0.24
SSB-204ENST00000417292 USP17L21D6R901 530 aa16.55■□□□□ 0.24
SSB-204ENST00000417292 MBD4O95243 580 aa16.55■□□□□ 0.24
SSB-204ENST00000417292 SLC4A3P48751 1232 aa16.55■□□□□ 0.24
SSB-204ENST00000417292 CCL23P55773 120 aa16.55■□□□□ 0.24
SSB-204ENST00000417292 NKX3-2P78367 333 aa16.55■□□□□ 0.24
SSB-204ENST00000417292 ZKSCAN2Q63HK3 967 aa16.55■□□□□ 0.24
SSB-204ENST00000417292 ARMCX2Q7L311 632 aa16.55■□□□□ 0.24
SSB-204ENST00000417292 DNAJC2Q99543 621 aaKnown RBP16.55■□□□□ 0.24
SSB-204ENST00000417292 WNT8AQ9H1J5 351 aa16.55■□□□□ 0.24
SSB-204ENST00000417292 ASTN1O14525 1302 aa16.54■□□□□ 0.24
SSB-204ENST00000417292 GRIN2DO15399 1336 aa16.54■□□□□ 0.24
SSB-204ENST00000417292 ERC2O15083 957 aa16.54■□□□□ 0.24
SSB-204ENST00000417292 CHGBP05060 677 aa16.54■□□□□ 0.24
SSB-204ENST00000417292 CXCL17Q6UXB2 119 aa16.54■□□□□ 0.24
SSB-204ENST00000417292 CPXCR1Q8N123 301 aa16.54■□□□□ 0.24
SSB-204ENST00000417292 ARIH1Q9Y4X5 557 aaPredicted RBP16.54■□□□□ 0.24
SSB-204ENST00000417292 PRRC2BQ5JSZ5 2229 aaKnown RBP16.54■□□□□ 0.24
SSB-204ENST00000417292 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.53■□□□□ 0.24
SSB-204ENST00000417292 RFXAPO00287 272 aa16.53■□□□□ 0.24
SSB-204ENST00000417292 ATP2A1O14983 1001 aa16.53■□□□□ 0.24
SSB-204ENST00000417292 PTGS1P23219 599 aa16.53■□□□□ 0.24
SSB-204ENST00000417292 ADD2P35612 726 aa16.53■□□□□ 0.24
SSB-204ENST00000417292 AAK1Q2M2I8 961 aa16.53■□□□□ 0.24
SSB-204ENST00000417292 CEP85Q6P2H3 762 aa16.53■□□□□ 0.24
SSB-204ENST00000417292 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.53■□□□□ 0.24
SSB-204ENST00000417292 ERC1Q8IUD2 1116 aa16.53■□□□□ 0.24
SSB-204ENST00000417292 CCDC144CPQ8IYA2 1237 aa16.53■□□□□ 0.24
SSB-204ENST00000417292 PRPF38AQ8NAV1 312 aaKnown RBP16.53■□□□□ 0.24
SSB-204ENST00000417292 NOC4LQ9BVI4 516 aaKnown RBP16.53■□□□□ 0.24
SSB-204ENST00000417292 TRPV6Q9H1D0 765 aa16.53■□□□□ 0.24
SSB-204ENST00000417292 RAVER2Q9HCJ3 691 aaKnown RBP16.53■□□□□ 0.24
SSB-204ENST00000417292 PCDHA11Q9Y5I1 949 aa16.53■□□□□ 0.24
SSB-204ENST00000417292 SLC4A7Q9Y6M7 1214 aa16.53■□□□□ 0.24
SSB-204ENST00000417292 GREB1LQ9C091 1923 aaPredicted RBP16.53■□□□□ 0.24
SSB-204ENST00000417292 F5H6K3 240 aa16.52■□□□□ 0.24
SSB-204ENST00000417292 RLBP1P12271 317 aa16.52■□□□□ 0.24
SSB-204ENST00000417292 KLRC3Q07444 240 aa16.52■□□□□ 0.24
SSB-204ENST00000417292 ITGA7Q13683 1181 aa16.52■□□□□ 0.24
SSB-204ENST00000417292 SKIV2LQ15477 1246 aaKnown RBP16.52■□□□□ 0.24
SSB-204ENST00000417292 CTR9Q6PD62 1173 aa16.52■□□□□ 0.24
SSB-204ENST00000417292 ANKRD35Q8N283 1001 aa16.52■□□□□ 0.24
SSB-204ENST00000417292 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.52■□□□□ 0.24
SSB-204ENST00000417292 MTCH2Q9Y6C9 303 aa16.52■□□□□ 0.24
SSB-204ENST00000417292 B4GALT4O60513 344 aa16.51■□□□□ 0.23
SSB-204ENST00000417292 NDUFB10O96000 172 aa16.51■□□□□ 0.23
SSB-204ENST00000417292 POU3F3P20264 500 aaPredicted RBP16.51■□□□□ 0.23
SSB-204ENST00000417292 CNTN2Q02246 1040 aa16.51■□□□□ 0.23
SSB-204ENST00000417292 ITPRIPQ8IWB1 547 aa16.51■□□□□ 0.23
SSB-204ENST00000417292 RHPN1Q8TCX5 695 aa16.51■□□□□ 0.23
SSB-204ENST00000417292 KHSRPQ92945 711 aaKnown RBP eCLIP16.51■□□□□ 0.23
SSB-204ENST00000417292 SCLYQ96I15 445 aa16.51■□□□□ 0.23
SSB-204ENST00000417292 SLC38A10Q9HBR0 1119 aa16.51■□□□□ 0.23
SSB-204ENST00000417292 GNEQ9Y223 722 aaKnown RBP16.51■□□□□ 0.23
SSB-204ENST00000417292 HCN4Q9Y3Q4 1203 aa16.51■□□□□ 0.23
SSB-204ENST00000417292 EPOPA6NHQ4 379 aa16.5■□□□□ 0.23
SSB-204ENST00000417292 ZBBXA8MT70 800 aa16.5■□□□□ 0.23
SSB-204ENST00000417292 TLL1O43897 1013 aa16.5■□□□□ 0.23
SSB-204ENST00000417292 ZBED4O75132 1171 aa16.5■□□□□ 0.23
SSB-204ENST00000417292 ATP2A2P16615 1042 aaKnown RBP16.5■□□□□ 0.23
SSB-204ENST00000417292 TNFAIP2Q03169 654 aa16.5■□□□□ 0.23
SSB-204ENST00000417292 KRT40Q6A162 431 aa16.5■□□□□ 0.23
SSB-204ENST00000417292 AMOTL1Q8IY63 956 aa16.5■□□□□ 0.23
SSB-204ENST00000417292 KIFC2Q96AC6 838 aa16.5■□□□□ 0.23
SSB-204ENST00000417292 AGBL1Q96MI9 1066 aa16.5■□□□□ 0.23
SSB-204ENST00000417292 CERS4Q9HA82 394 aa16.5■□□□□ 0.23
SSB-204ENST00000417292 C11orf16Q9NQ32 467 aa16.5■□□□□ 0.23
SSB-204ENST00000417292 PIEZO1Q92508 2521 aa16.49■□□□□ 0.23
SSB-204ENST00000417292 CABYRO75952 493 aa16.49■□□□□ 0.23
SSB-204ENST00000417292 CA3P07451 260 aa16.49■□□□□ 0.23
SSB-204ENST00000417292 PSMC6P62333 389 aa16.49■□□□□ 0.23
SSB-204ENST00000417292 TTLL4Q14679 1199 aa16.49■□□□□ 0.23
SSB-204ENST00000417292 FSCN1Q16658 493 aaKnown RBP16.49■□□□□ 0.23
SSB-204ENST00000417292 TMEM31Q5JXX7 168 aa16.49■□□□□ 0.23
SSB-204ENST00000417292 NOL8Q76FK4 1167 aaKnown RBP16.49■□□□□ 0.23
SSB-204ENST00000417292 TLK2Q86UE8 772 aa16.49■□□□□ 0.23
SSB-204ENST00000417292 RPUSD2Q8IZ73 545 aaKnown RBP16.49■□□□□ 0.23
SSB-204ENST00000417292 FAM133AQ8N9E0 248 aa16.49■□□□□ 0.23
SSB-204ENST00000417292 PAG1Q9NWQ8 432 aa16.49■□□□□ 0.23
SSB-204ENST00000417292 NYAP2Q9P242 653 aa16.49■□□□□ 0.23
SSB-204ENST00000417292 SLC4A4Q9Y6R1 1079 aa16.49■□□□□ 0.23
SSB-204ENST00000417292 DDX49Q9Y6V7 483 aaKnown RBP16.49■□□□□ 0.23
SSB-204ENST00000417292 WDFY4Q6ZS81 3184 aa16.49■□□□□ 0.23
SSB-204ENST00000417292 LRRC37A2A6NM11 1700 aa16.48■□□□□ 0.23
SSB-204ENST00000417292 RASA1P20936 1047 aa16.48■□□□□ 0.23
SSB-204ENST00000417292 TMEM67Q5HYA8 995 aa16.48■□□□□ 0.23
SSB-204ENST00000417292 TMEM63BQ5T3F8 832 aa16.48■□□□□ 0.23
SSB-204ENST00000417292 FTSJ3Q8IY81 847 aaKnown RBP16.48■□□□□ 0.23
SSB-204ENST00000417292 CHST13Q8NET6 341 aa16.48■□□□□ 0.23
SSB-204ENST00000417292 YTHDC1Q96MU7 727 aaKnown RBP16.48■□□□□ 0.23
SSB-204ENST00000417292 HOMER2Q9NSB8 354 aa16.48■□□□□ 0.23
SSB-204ENST00000417292 FBXO40Q9UH90 709 aa16.48■□□□□ 0.23
SSB-204ENST00000417292 SOWAHBA6NEL2 793 aa16.47■□□□□ 0.23
SSB-204ENST00000417292 DYNC1LI2O43237 492 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms