RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 ACAD9Q9H845 621 aa18.37■□□□□ 0.53
ITGB1-204ENST00000417122 CNNM2Q9H8M5 875 aa18.37■□□□□ 0.53
ITGB1-204ENST00000417122 GPCPD1Q9NPB8 672 aa18.37■□□□□ 0.53
ITGB1-204ENST00000417122 NRBP1Q9UHY1 535 aa18.37■□□□□ 0.53
ITGB1-204ENST00000417122 PFASO15067 1338 aa18.37■□□□□ 0.53
ITGB1-204ENST00000417122 FRMPD2Q68DX3 1309 aaPredicted RBP18.37■□□□□ 0.53
ITGB1-204ENST00000417122 SNHG28P0DPA3 235 aa18.36■□□□□ 0.53
ITGB1-204ENST00000417122 COL6A1P12109 1028 aa18.36■□□□□ 0.53
ITGB1-204ENST00000417122 ALAS1P13196 640 aa18.36■□□□□ 0.53
ITGB1-204ENST00000417122 SYDE2Q5VT97 1194 aa18.36■□□□□ 0.53
ITGB1-204ENST00000417122 ANO1Q5XXA6 986 aa18.36■□□□□ 0.53
ITGB1-204ENST00000417122 CENPQQ7L2Z9 268 aaPredicted RBP18.36■□□□□ 0.53
ITGB1-204ENST00000417122 TRERF1Q96PN7 1200 aa18.36■□□□□ 0.53
ITGB1-204ENST00000417122 ZSCAN10Q96SZ4 725 aaPredicted RBP18.36■□□□□ 0.53
ITGB1-204ENST00000417122 RANBP17Q9H2T7 1088 aaKnown RBP18.36■□□□□ 0.53
ITGB1-204ENST00000417122 RNF146Q9NTX7 359 aa18.36■□□□□ 0.53
ITGB1-204ENST00000417122 ZSWIM5Q9P217 1185 aa18.36■□□□□ 0.53
ITGB1-204ENST00000417122 SYNGAP1Q96PV0 1343 aa18.35■□□□□ 0.53
ITGB1-204ENST00000417122 SGSM2O43147 1006 aa18.35■□□□□ 0.53
ITGB1-204ENST00000417122 PTH1RQ03431 593 aa18.35■□□□□ 0.53
ITGB1-204ENST00000417122 ZNF543Q08ER8 600 aa18.35■□□□□ 0.53
ITGB1-204ENST00000417122 MAMDC4Q6UXC1 1216 aa18.35■□□□□ 0.53
ITGB1-204ENST00000417122 ZNF467Q7Z7K2 595 aaPredicted RBP18.35■□□□□ 0.53
ITGB1-204ENST00000417122 CNPY2Q9Y2B0 182 aa18.35■□□□□ 0.53
ITGB1-204ENST00000417122 SMCHD1A6NHR9 2005 aa18.34■□□□□ 0.53
ITGB1-204ENST00000417122 DNM1LO00429 736 aa18.34■□□□□ 0.53
ITGB1-204ENST00000417122 ICAM1P05362 532 aa18.34■□□□□ 0.53
ITGB1-204ENST00000417122 TAL1P17542 331 aaPredicted RBP18.34■□□□□ 0.53
ITGB1-204ENST00000417122 ARRDC4Q8NCT1 418 aa18.34■□□□□ 0.53
ITGB1-204ENST00000417122 PNMA1Q8ND90 353 aa18.34■□□□□ 0.53
ITGB1-204ENST00000417122 ANKS1AQ92625 1134 aa18.34■□□□□ 0.53
ITGB1-204ENST00000417122 KAT14Q9H8E8 782 aa18.34■□□□□ 0.53
ITGB1-204ENST00000417122 CCPG1Q9ULG6 757 aa18.34■□□□□ 0.53
ITGB1-204ENST00000417122 U3KPZ7 1027 aaPredicted RBP18.34■□□□□ 0.53
ITGB1-204ENST00000417122 TNKSO95271 1327 aa18.33■□□□□ 0.53
ITGB1-204ENST00000417122 SNAI1O95863 264 aaPredicted RBP18.33■□□□□ 0.52
ITGB1-204ENST00000417122 CYP21A2P08686 494 aa18.33■□□□□ 0.52
ITGB1-204ENST00000417122 ZNF865P0CJ78 1059 aaPredicted RBP18.33■□□□□ 0.52
ITGB1-204ENST00000417122 GPATCH4Q5T3I0 446 aaKnown RBP18.33■□□□□ 0.52
ITGB1-204ENST00000417122 GJC2Q5T442 439 aaPredicted RBP18.33■□□□□ 0.52
ITGB1-204ENST00000417122 C7orf61Q8IZ16 206 aa18.33■□□□□ 0.52
ITGB1-204ENST00000417122 ENAHQ8N8S7 591 aaPredicted RBP18.33■□□□□ 0.52
ITGB1-204ENST00000417122 FGD4Q96M96 766 aa18.33■□□□□ 0.52
ITGB1-204ENST00000417122 UBAC1Q9BSL1 405 aa18.33■□□□□ 0.52
ITGB1-204ENST00000417122 SENP6Q9GZR1 1112 aaPredicted RBP18.33■□□□□ 0.52
ITGB1-204ENST00000417122 A1CFQ9NQ94 594 aaKnown RBP18.33■□□□□ 0.52
ITGB1-204ENST00000417122 COLQQ9Y215 455 aaPredicted RBP18.33■□□□□ 0.52
ITGB1-204ENST00000417122 POTEB2H3BUK9 544 aa18.32■□□□□ 0.52
ITGB1-204ENST00000417122 RARBP10826 455 aa18.32■□□□□ 0.52
ITGB1-204ENST00000417122 AKR1A1P14550 325 aa18.32■□□□□ 0.52
ITGB1-204ENST00000417122 CNTN2Q02246 1040 aa18.32■□□□□ 0.52
ITGB1-204ENST00000417122 TRDNQ13061 729 aa18.32■□□□□ 0.52
ITGB1-204ENST00000417122 MUM1L1Q5H9M0 696 aa18.32■□□□□ 0.52
ITGB1-204ENST00000417122 HABP4Q5JVS0 413 aaKnown RBP18.32■□□□□ 0.52
ITGB1-204ENST00000417122 KBTBD13C9JR72 458 aa18.31■□□□□ 0.52
ITGB1-204ENST00000417122 MYCNP04198 464 aaPredicted RBP18.31■□□□□ 0.52
ITGB1-204ENST00000417122 GOLGA8HP0CJ92 632 aa18.31■□□□□ 0.52
ITGB1-204ENST00000417122 LRRC26Q2I0M4 334 aa18.31■□□□□ 0.52
ITGB1-204ENST00000417122 CHRDL2Q6WN34 429 aa18.31■□□□□ 0.52
ITGB1-204ENST00000417122 CYB5R4Q7L1T6 521 aa18.31■□□□□ 0.52
ITGB1-204ENST00000417122 SKAP1Q86WV1 359 aa18.31■□□□□ 0.52
ITGB1-204ENST00000417122 FAM133AQ8N9E0 248 aa18.31■□□□□ 0.52
ITGB1-204ENST00000417122 MAP4K1Q92918 833 aa18.31■□□□□ 0.52
ITGB1-204ENST00000417122 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.31■□□□□ 0.52
ITGB1-204ENST00000417122 ZHX1Q9UKY1 873 aaPredicted RBP18.31■□□□□ 0.52
ITGB1-204ENST00000417122 MCM3APO60318 1980 aa18.31■□□□□ 0.52
ITGB1-204ENST00000417122 LRRC41Q15345 812 aa18.3■□□□□ 0.52
ITGB1-204ENST00000417122 IFIT1BQ5T764 474 aaKnown RBP18.3■□□□□ 0.52
ITGB1-204ENST00000417122 NSMFQ6X4W1 530 aa18.3■□□□□ 0.52
ITGB1-204ENST00000417122 ARMCX2Q7L311 632 aa18.3■□□□□ 0.52
ITGB1-204ENST00000417122 CCDC144CPQ8IYA2 1237 aa18.3■□□□□ 0.52
ITGB1-204ENST00000417122 ABHD16BQ9H3Z7 469 aa18.3■□□□□ 0.52
ITGB1-204ENST00000417122 XPNPEP3Q9NQH7 507 aa18.3■□□□□ 0.52
ITGB1-204ENST00000417122 PNMA2Q9UL42 364 aa18.3■□□□□ 0.52
ITGB1-204ENST00000417122 FAM184BQ9ULE4 1060 aa18.3■□□□□ 0.52
ITGB1-204ENST00000417122 SOWAHBA6NEL2 793 aa18.29■□□□□ 0.52
ITGB1-204ENST00000417122 ACVR2BQ13705 512 aa18.29■□□□□ 0.52
ITGB1-204ENST00000417122 ASPRV1Q53RT3 343 aa18.29■□□□□ 0.52
ITGB1-204ENST00000417122 KIAA1211Q6ZU35 1233 aa18.29■□□□□ 0.52
ITGB1-204ENST00000417122 UBA5Q9GZZ9 404 aa18.29■□□□□ 0.52
ITGB1-204ENST00000417122 CPVLQ9H3G5 476 aa18.29■□□□□ 0.52
ITGB1-204ENST00000417122 CYP39A1Q9NYL5 469 aa18.29■□□□□ 0.52
ITGB1-204ENST00000417122 RBM8AQ9Y5S9 174 aaKnown RBP18.29■□□□□ 0.52
ITGB1-204ENST00000417122 LCTP09848 1927 aa18.28■□□□□ 0.52
ITGB1-204ENST00000417122 ASB14A6NK59 587 aa18.28■□□□□ 0.52
ITGB1-204ENST00000417122 E7EWF7 191 aa18.28■□□□□ 0.52
ITGB1-204ENST00000417122 PGK1P00558 417 aa18.28■□□□□ 0.52
ITGB1-204ENST00000417122 ATN1P54259 1190 aaPredicted RBP18.28■□□□□ 0.52
ITGB1-204ENST00000417122 SEC23AQ15436 765 aa18.28■□□□□ 0.52
ITGB1-204ENST00000417122 BMP2KLQ5H9B9 411 aa18.28■□□□□ 0.52
ITGB1-204ENST00000417122 RALYLQ86SE5 291 aaKnown RBP18.28■□□□□ 0.52
ITGB1-204ENST00000417122 RNF180Q86T96 592 aa18.28■□□□□ 0.52
ITGB1-204ENST00000417122 NCOA7Q8NI08 942 aa18.28■□□□□ 0.52
ITGB1-204ENST00000417122 LENG1Q96BZ8 264 aaPredicted RBP18.28■□□□□ 0.52
ITGB1-204ENST00000417122 ZMYND8Q9ULU4 1186 aaPredicted RBP18.28■□□□□ 0.52
ITGB1-204ENST00000417122 TAF6LQ9Y6J9 622 aa18.28■□□□□ 0.52
ITGB1-204ENST00000417122 WDR19Q8NEZ3 1342 aa18.27■□□□□ 0.52
ITGB1-204ENST00000417122 NFIBO00712 420 aa18.27■□□□□ 0.52
ITGB1-204ENST00000417122 PARP1P09874 1014 aaKnown RBP18.27■□□□□ 0.52
ITGB1-204ENST00000417122 CCDC136Q96JN2 1154 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms