RNA–Protein interactions for RNA: ENST00000417036.1

THUMPD3-203, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-203ENST00000417036 CDX2Q99626 313 aaPredicted RBP16.24■□□□□ 0.19
THUMPD3-203ENST00000417036 UPF3BQ9BZI7 483 aaKnown RBP16.24■□□□□ 0.19
THUMPD3-203ENST00000417036 SLC5A4Q9NY91 659 aa16.24■□□□□ 0.19
THUMPD3-203ENST00000417036 COBLO75128 1261 aa16.23■□□□□ 0.19
THUMPD3-203ENST00000417036 TSPY3P0CV98 308 aa16.23■□□□□ 0.19
THUMPD3-203ENST00000417036 TSPY8P0CW00 308 aa16.23■□□□□ 0.19
THUMPD3-203ENST00000417036 ADCYAP1R1P41586 468 aa16.23■□□□□ 0.19
THUMPD3-203ENST00000417036 SNX17Q15036 470 aa16.23■□□□□ 0.19
THUMPD3-203ENST00000417036 CHST3Q7LGC8 479 aa16.23■□□□□ 0.19
THUMPD3-203ENST00000417036 MB21D1Q8N884 522 aa16.23■□□□□ 0.19
THUMPD3-203ENST00000417036 MAFAQ8NHW3 353 aaPredicted RBP16.23■□□□□ 0.19
THUMPD3-203ENST00000417036 NEK1Q96PY6 1258 aa16.23■□□□□ 0.19
THUMPD3-203ENST00000417036 KIF2CQ99661 725 aa16.23■□□□□ 0.19
THUMPD3-203ENST00000417036 SEMA6BQ9H3T3 888 aa16.23■□□□□ 0.19
THUMPD3-203ENST00000417036 PDLIM7Q9NR12 457 aa16.23■□□□□ 0.19
THUMPD3-203ENST00000417036 TTC28Q96AY4 2481 aa16.23■□□□□ 0.19
THUMPD3-203ENST00000417036 MYO9BQ13459 2157 aa16.23■□□□□ 0.19
THUMPD3-203ENST00000417036 NMT2O60551 498 aa16.22■□□□□ 0.19
THUMPD3-203ENST00000417036 TFAP4Q01664 338 aa16.22■□□□□ 0.19
THUMPD3-203ENST00000417036 LRRC41Q15345 812 aa16.22■□□□□ 0.19
THUMPD3-203ENST00000417036 PRAMEF19Q5SWL8 479 aa16.22■□□□□ 0.19
THUMPD3-203ENST00000417036 BLOC1S2Q6QNY1 142 aa16.22■□□□□ 0.19
THUMPD3-203ENST00000417036 NCAPG2Q86XI2 1143 aa16.22■□□□□ 0.19
THUMPD3-203ENST00000417036 ZNF444Q8N0Y2 327 aaPredicted RBP16.22■□□□□ 0.19
THUMPD3-203ENST00000417036 FERMT2Q96AC1 680 aa16.22■□□□□ 0.19
THUMPD3-203ENST00000417036 IL17RAQ96F46 866 aa16.22■□□□□ 0.19
THUMPD3-203ENST00000417036 ZKSCAN3Q9BRR0 538 aa16.22■□□□□ 0.19
THUMPD3-203ENST00000417036 LRRC2Q9BYS8 371 aa16.22■□□□□ 0.19
THUMPD3-203ENST00000417036 MROH8Q9H579 483 aa16.22■□□□□ 0.19
THUMPD3-203ENST00000417036 SPTBN5Q9NRC6 3674 aaKnown RBP16.22■□□□□ 0.19
THUMPD3-203ENST00000417036 PRC1O43663 620 aa16.21■□□□□ 0.19
THUMPD3-203ENST00000417036 FLOT1O75955 427 aa16.21■□□□□ 0.19
THUMPD3-203ENST00000417036 DSG3P32926 999 aa16.21■□□□□ 0.19
THUMPD3-203ENST00000417036 SMAD3P84022 425 aaKnown RBP16.21■□□□□ 0.19
THUMPD3-203ENST00000417036 KIAA1755Q5JYT7 1200 aa16.21■□□□□ 0.19
THUMPD3-203ENST00000417036 SAMD1Q6SPF0 538 aaPredicted RBP16.21■□□□□ 0.19
THUMPD3-203ENST00000417036 TMEM179Q6ZVK1 233 aa16.21■□□□□ 0.19
THUMPD3-203ENST00000417036 SH3RF1Q7Z6J0 888 aa16.21■□□□□ 0.19
THUMPD3-203ENST00000417036 ABRAQ8N0Z2 381 aa16.21■□□□□ 0.19
THUMPD3-203ENST00000417036 MYLIPQ8WY64 445 aa16.21■□□□□ 0.19
THUMPD3-203ENST00000417036 ATG4CQ96DT6 458 aa16.21■□□□□ 0.19
THUMPD3-203ENST00000417036 MAML3Q96JK9 1138 aa16.21■□□□□ 0.19
THUMPD3-203ENST00000417036 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.21■□□□□ 0.19
THUMPD3-203ENST00000417036 TNKSO95271 1327 aa16.2■□□□□ 0.18
THUMPD3-203ENST00000417036 TRIM43BA6NCK2 446 aa16.2■□□□□ 0.18
THUMPD3-203ENST00000417036 RPS6KB1P23443 525 aa16.2■□□□□ 0.18
THUMPD3-203ENST00000417036 PSMA5P28066 241 aa16.2■□□□□ 0.18
THUMPD3-203ENST00000417036 MCM5P33992 734 aa16.2■□□□□ 0.18
THUMPD3-203ENST00000417036 TLE2Q04725 743 aa16.2■□□□□ 0.18
THUMPD3-203ENST00000417036 ICA1Q05084 483 aa16.2■□□□□ 0.18
THUMPD3-203ENST00000417036 SPICE1Q8N0Z3 855 aa16.2■□□□□ 0.18
THUMPD3-203ENST00000417036 NEDD1Q8NHV4 660 aa16.2■□□□□ 0.18
THUMPD3-203ENST00000417036 TRIM43Q96BQ3 446 aaPredicted RBP16.2■□□□□ 0.18
THUMPD3-203ENST00000417036 CCDC17Q96LX7 622 aa16.2■□□□□ 0.18
THUMPD3-203ENST00000417036 UBAC1Q9BSL1 405 aa16.2■□□□□ 0.18
THUMPD3-203ENST00000417036 TTYH1Q9H313 450 aaPredicted RBP16.2■□□□□ 0.18
THUMPD3-203ENST00000417036 ARHGEF10LQ9HCE6 1279 aa16.2■□□□□ 0.18
THUMPD3-203ENST00000417036 ZSWIM5Q9P217 1185 aa16.2■□□□□ 0.18
THUMPD3-203ENST00000417036 CYP46A1Q9Y6A2 500 aa16.2■□□□□ 0.18
THUMPD3-203ENST00000417036 MCM3APO60318 1980 aa16.19■□□□□ 0.18
THUMPD3-203ENST00000417036 IGKV6D-41A0A0C4DH26 115 aa16.19■□□□□ 0.18
THUMPD3-203ENST00000417036 FCER1AP12319 257 aa16.19■□□□□ 0.18
THUMPD3-203ENST00000417036 C1orf53Q5VUE5 145 aa16.19■□□□□ 0.18
THUMPD3-203ENST00000417036 RUFY3Q7L099 469 aa16.19■□□□□ 0.18
THUMPD3-203ENST00000417036 CEP95Q96GE4 821 aa16.19■□□□□ 0.18
THUMPD3-203ENST00000417036 TM6SF1Q9BZW5 370 aa16.19■□□□□ 0.18
THUMPD3-203ENST00000417036 SH2D4AQ9H788 454 aa16.19■□□□□ 0.18
THUMPD3-203ENST00000417036 ZSWIM6Q9HCJ5 1215 aa16.19■□□□□ 0.18
THUMPD3-203ENST00000417036 XPNPEP3Q9NQH7 507 aa16.19■□□□□ 0.18
THUMPD3-203ENST00000417036 GPHNQ9NQX3 736 aaPredicted RBP16.19■□□□□ 0.18
THUMPD3-203ENST00000417036 IL17RBQ9NRM6 502 aa16.19■□□□□ 0.18
THUMPD3-203ENST00000417036 HMGB1P09429 215 aaKnown RBP16.18■□□□□ 0.18
THUMPD3-203ENST00000417036 RARBP10826 455 aa16.18■□□□□ 0.18
THUMPD3-203ENST00000417036 FOSL2P15408 326 aa16.18■□□□□ 0.18
THUMPD3-203ENST00000417036 RABEP1Q15276 862 aa16.18■□□□□ 0.18
THUMPD3-203ENST00000417036 DHX32Q7L7V1 743 aaKnown RBP16.18■□□□□ 0.18
THUMPD3-203ENST00000417036 IQCA1Q86XH1 822 aa16.18■□□□□ 0.18
THUMPD3-203ENST00000417036 ENAHQ8N8S7 591 aaPredicted RBP16.18■□□□□ 0.18
THUMPD3-203ENST00000417036 RNPC3Q96LT9 517 aaKnown RBP16.18■□□□□ 0.18
THUMPD3-203ENST00000417036 ZSCAN10Q96SZ4 725 aaPredicted RBP16.18■□□□□ 0.18
THUMPD3-203ENST00000417036 VCPKMTQ9H867 229 aa16.18■□□□□ 0.18
THUMPD3-203ENST00000417036 PHF24Q9UPV7 400 aa16.18■□□□□ 0.18
THUMPD3-203ENST00000417036 WDR19Q8NEZ3 1342 aa16.18■□□□□ 0.18
THUMPD3-203ENST00000417036 SH2B2O14492 632 aaPredicted RBP16.17■□□□□ 0.18
THUMPD3-203ENST00000417036 IFIT3O14879 490 aaKnown RBP16.17■□□□□ 0.18
THUMPD3-203ENST00000417036 WDR46O15213 610 aaKnown RBP16.17■□□□□ 0.18
THUMPD3-203ENST00000417036 SLC25A27O95847 323 aa16.17■□□□□ 0.18
THUMPD3-203ENST00000417036 CLTBP09497 229 aa16.17■□□□□ 0.18
THUMPD3-203ENST00000417036 NT5C2P49902 561 aa16.17■□□□□ 0.18
THUMPD3-203ENST00000417036 TMEM132BQ14DG7 1078 aa16.17■□□□□ 0.18
THUMPD3-203ENST00000417036 TMEM67Q5HYA8 995 aa16.17■□□□□ 0.18
THUMPD3-203ENST00000417036 LRRC47Q8N1G4 583 aaKnown RBP16.17■□□□□ 0.18
THUMPD3-203ENST00000417036 MMP19Q99542 508 aa16.17■□□□□ 0.18
THUMPD3-203ENST00000417036 SENP2Q9HC62 589 aa16.17■□□□□ 0.18
THUMPD3-203ENST00000417036 NRBP1Q9UHY1 535 aa16.17■□□□□ 0.18
THUMPD3-203ENST00000417036 STX8Q9UNK0 236 aa16.17■□□□□ 0.18
THUMPD3-203ENST00000417036 TMX2Q9Y320 296 aa16.17■□□□□ 0.18
THUMPD3-203ENST00000417036 PGK1P00558 417 aa16.16■□□□□ 0.18
THUMPD3-203ENST00000417036 NEK4P51957 841 aa16.16■□□□□ 0.18
THUMPD3-203ENST00000417036 FGD1P98174 961 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms