RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 GJA9P57773 515 aa11.27□□□□□ -0.61
LINC01238-201ENST00000416204 PSMC6P62333 389 aa11.27□□□□□ -0.61
LINC01238-201ENST00000416204 CNTN2Q02246 1040 aa11.27□□□□□ -0.61
LINC01238-201ENST00000416204 TMEM63BQ5T3F8 832 aa11.27□□□□□ -0.61
LINC01238-201ENST00000416204 ZKSCAN2Q63HK3 967 aa11.27□□□□□ -0.61
LINC01238-201ENST00000416204 ARMCX2Q7L311 632 aa11.27□□□□□ -0.61
LINC01238-201ENST00000416204 CCDC144CPQ8IYA2 1237 aa11.27□□□□□ -0.61
LINC01238-201ENST00000416204 ANKRD35Q8N283 1001 aa11.27□□□□□ -0.61
LINC01238-201ENST00000416204 PCSK9Q8NBP7 692 aaKnown RBP11.27□□□□□ -0.61
LINC01238-201ENST00000416204 PPP1R13LQ8WUF5 828 aa11.27□□□□□ -0.61
LINC01238-201ENST00000416204 KHSRPQ92945 711 aaKnown RBP eCLIP11.27□□□□□ -0.61
LINC01238-201ENST00000416204 LRFN3Q9BTN0 628 aa11.27□□□□□ -0.61
LINC01238-201ENST00000416204 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.27□□□□□ -0.61
LINC01238-201ENST00000416204 TEX13BQ9BXU2 312 aa11.27□□□□□ -0.61
LINC01238-201ENST00000416204 TSPYL2Q9H2G4 693 aaPredicted RBP11.27□□□□□ -0.61
LINC01238-201ENST00000416204 SPC25Q9HBM1 224 aa11.27□□□□□ -0.61
LINC01238-201ENST00000416204 ASTN1O14525 1302 aa11.27□□□□□ -0.61
LINC01238-201ENST00000416204 NCOR1O75376 2440 aa11.27□□□□□ -0.61
LINC01238-201ENST00000416204 GBF1Q92538 1859 aa11.26□□□□□ -0.61
LINC01238-201ENST00000416204 DNAJC25-GNG10A0A024R161 153 aa11.26□□□□□ -0.61
LINC01238-201ENST00000416204 CST5P28325 142 aaPredicted RBP11.26□□□□□ -0.61
LINC01238-201ENST00000416204 TTF1Q15361 905 aaPredicted RBP11.26□□□□□ -0.61
LINC01238-201ENST00000416204 C12orf60Q5U649 245 aa11.26□□□□□ -0.61
LINC01238-201ENST00000416204 CEP85Q6P2H3 762 aa11.26□□□□□ -0.61
LINC01238-201ENST00000416204 MAMDC4Q6UXC1 1216 aa11.26□□□□□ -0.61
LINC01238-201ENST00000416204 C16orf86Q6ZW13 317 aa11.26□□□□□ -0.61
LINC01238-201ENST00000416204 FTSJ3Q8IY81 847 aaKnown RBP11.26□□□□□ -0.61
LINC01238-201ENST00000416204 C1QTNF1Q9BXJ1 281 aa11.26□□□□□ -0.61
LINC01238-201ENST00000416204 UPF3AQ9H1J1 476 aaKnown RBP11.26□□□□□ -0.61
LINC01238-201ENST00000416204 WNT8AQ9H1J5 351 aa11.26□□□□□ -0.61
LINC01238-201ENST00000416204 KANSL2Q9H9L4 492 aa11.26□□□□□ -0.61
LINC01238-201ENST00000416204 ISY1Q9ULR0 285 aaKnown RBP11.26□□□□□ -0.61
LINC01238-201ENST00000416204 CTDP1Q9Y5B0 961 aaPredicted RBP11.26□□□□□ -0.61
LINC01238-201ENST00000416204 SLC4A7Q9Y6M7 1214 aa11.26□□□□□ -0.61
LINC01238-201ENST00000416204 GRIN2DO15399 1336 aa11.26□□□□□ -0.61
LINC01238-201ENST00000416204 BAZ2AQ9UIF9 1905 aaKnown RBP11.25□□□□□ -0.61
LINC01238-201ENST00000416204 B4GALT4O60513 344 aa11.25□□□□□ -0.61
LINC01238-201ENST00000416204 ARHGEF15O94989 841 aa11.25□□□□□ -0.61
LINC01238-201ENST00000416204 NDUFB10O96000 172 aa11.25□□□□□ -0.61
LINC01238-201ENST00000416204 CA3P07451 260 aa11.25□□□□□ -0.61
LINC01238-201ENST00000416204 COPB2P35606 906 aa11.25□□□□□ -0.61
LINC01238-201ENST00000416204 ITGA7Q13683 1181 aa11.25□□□□□ -0.61
LINC01238-201ENST00000416204 TTLL4Q14679 1199 aa11.25□□□□□ -0.61
LINC01238-201ENST00000416204 CTR9Q6PD62 1173 aa11.25□□□□□ -0.61
LINC01238-201ENST00000416204 EEPD1Q7L9B9 569 aa11.25□□□□□ -0.61
LINC01238-201ENST00000416204 SPRED2Q7Z698 418 aa11.25□□□□□ -0.61
LINC01238-201ENST00000416204 DEFB128Q7Z7B8 93 aa11.25□□□□□ -0.61
LINC01238-201ENST00000416204 VWCEQ96DN2 955 aa11.25□□□□□ -0.61
LINC01238-201ENST00000416204 CCDC17Q96LX7 622 aa11.25□□□□□ -0.61
LINC01238-201ENST00000416204 NOC4LQ9BVI4 516 aaKnown RBP11.25□□□□□ -0.61
LINC01238-201ENST00000416204 MTIF3Q9H2K0 278 aaKnown RBP11.25□□□□□ -0.61
LINC01238-201ENST00000416204 BOLA2Q9H3K6 86 aa11.25□□□□□ -0.61
LINC01238-201ENST00000416204 SLC4A4Q9Y6R1 1079 aa11.25□□□□□ -0.61
LINC01238-201ENST00000416204 F5H6K3 240 aa11.24□□□□□ -0.61
LINC01238-201ENST00000416204 DYNC1LI2O43237 492 aaPredicted RBP11.24□□□□□ -0.61
LINC01238-201ENST00000416204 ZBED4O75132 1171 aa11.24□□□□□ -0.61
LINC01238-201ENST00000416204 CYP2C9P11712 490 aa11.24□□□□□ -0.61
LINC01238-201ENST00000416204 ATP2A2P16615 1042 aaKnown RBP11.24□□□□□ -0.61
LINC01238-201ENST00000416204 ADD2P35612 726 aa11.24□□□□□ -0.61
LINC01238-201ENST00000416204 SNAP25P60880 206 aa11.24□□□□□ -0.61
LINC01238-201ENST00000416204 TNFAIP2Q03169 654 aa11.24□□□□□ -0.61
LINC01238-201ENST00000416204 KLRC3Q07444 240 aa11.24□□□□□ -0.61
LINC01238-201ENST00000416204 TLK2Q86UE8 772 aa11.24□□□□□ -0.61
LINC01238-201ENST00000416204 AMOTL1Q8IY63 956 aa11.24□□□□□ -0.61
LINC01238-201ENST00000416204 MSL3Q8N5Y2 521 aaKnown RBP11.24□□□□□ -0.61
LINC01238-201ENST00000416204 RHPN1Q8TCX5 695 aa11.24□□□□□ -0.61
LINC01238-201ENST00000416204 ARNTL2Q8WYA1 636 aa11.24□□□□□ -0.61
LINC01238-201ENST00000416204 KATNBL1Q9H079 304 aa11.24□□□□□ -0.61
LINC01238-201ENST00000416204 ABHD16BQ9H3Z7 469 aa11.24□□□□□ -0.61
LINC01238-201ENST00000416204 PDGFCQ9NRA1 345 aa11.24□□□□□ -0.61
LINC01238-201ENST00000416204 ATP8A2Q9NTI2 1148 aa11.24□□□□□ -0.61
LINC01238-201ENST00000416204 CLIP2Q9UDT6 1046 aa11.24□□□□□ -0.61
LINC01238-201ENST00000416204 HCN4Q9Y3Q4 1203 aa11.24□□□□□ -0.61
LINC01238-201ENST00000416204 MTCH2Q9Y6C9 303 aa11.24□□□□□ -0.61
LINC01238-201ENST00000416204 MYH8P13535 1937 aa11.24□□□□□ -0.61
LINC01238-201ENST00000416204 MCM3APO60318 1980 aa11.23□□□□□ -0.61
LINC01238-201ENST00000416204 PRDM1O75626 825 aa11.23□□□□□ -0.61
LINC01238-201ENST00000416204 IFIT2P09913 472 aaKnown RBP11.23□□□□□ -0.61
LINC01238-201ENST00000416204 SMPD1P17405 629 aa11.23□□□□□ -0.61
LINC01238-201ENST00000416204 FSCN1Q16658 493 aaKnown RBP11.23□□□□□ -0.61
LINC01238-201ENST00000416204 ERC1Q8IUD2 1116 aa11.23□□□□□ -0.61
LINC01238-201ENST00000416204 FBXO16Q8IX29 292 aaPredicted RBP11.23□□□□□ -0.61
LINC01238-201ENST00000416204 LRRC47Q8N1G4 583 aaKnown RBP11.23□□□□□ -0.61
LINC01238-201ENST00000416204 PRPF38AQ8NAV1 312 aaKnown RBP11.23□□□□□ -0.61
LINC01238-201ENST00000416204 TRMT13Q9NUP7 481 aaKnown RBP11.23□□□□□ -0.61
LINC01238-201ENST00000416204 PAG1Q9NWQ8 432 aa11.23□□□□□ -0.61
LINC01238-201ENST00000416204 PCDHA11Q9Y5I1 949 aa11.23□□□□□ -0.61
LINC01238-201ENST00000416204 SOWAHBA6NEL2 793 aa11.22□□□□□ -0.61
LINC01238-201ENST00000416204 MINDY4BA8MYZ0 360 aa11.22□□□□□ -0.61
LINC01238-201ENST00000416204 ERC2O15083 957 aa11.22□□□□□ -0.61
LINC01238-201ENST00000416204 RASA1P20936 1047 aa11.22□□□□□ -0.61
LINC01238-201ENST00000416204 AAK1Q2M2I8 961 aa11.22□□□□□ -0.61
LINC01238-201ENST00000416204 TMEM67Q5HYA8 995 aa11.22□□□□□ -0.61
LINC01238-201ENST00000416204 PRRC2BQ5JSZ5 2229 aaKnown RBP11.22□□□□□ -0.61
LINC01238-201ENST00000416204 TMEM31Q5JXX7 168 aa11.22□□□□□ -0.61
LINC01238-201ENST00000416204 TMED8Q6PL24 325 aaPredicted RBP11.22□□□□□ -0.61
LINC01238-201ENST00000416204 ZNF467Q7Z7K2 595 aaPredicted RBP11.22□□□□□ -0.61
LINC01238-201ENST00000416204 SLC43A3Q8NBI5 491 aa11.22□□□□□ -0.61
LINC01238-201ENST00000416204 DDRGK1Q96HY6 314 aa11.22□□□□□ -0.61
LINC01238-201ENST00000416204 AGBL1Q96MI9 1066 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms