RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 ASAP1Q9ULH1 1129 aa14.23□□□□□ -0.13
SCN1B-202ENST00000415950 ESYT3A0FGR9 886 aa14.23□□□□□ -0.13
SCN1B-202ENST00000415950 UBE2Q2LH0YL09 131 aa14.23□□□□□ -0.13
SCN1B-202ENST00000415950 MOCS3O95396 460 aa14.23□□□□□ -0.13
SCN1B-202ENST00000415950 ATP2A2P16615 1042 aaKnown RBP14.23□□□□□ -0.13
SCN1B-202ENST00000415950 ARHGAP25P42331 645 aa14.23□□□□□ -0.13
SCN1B-202ENST00000415950 ARHGAP44Q17R89 818 aa14.23□□□□□ -0.13
SCN1B-202ENST00000415950 TBC1D10CQ8IV04 446 aa14.23□□□□□ -0.13
SCN1B-202ENST00000415950 TRIM58Q8NG06 486 aa14.23□□□□□ -0.13
SCN1B-202ENST00000415950 TFR2Q9UP52 801 aa14.23□□□□□ -0.13
SCN1B-202ENST00000415950 CCDC169A6NNP5 214 aa14.22□□□□□ -0.13
SCN1B-202ENST00000415950 EIF3CLB5ME19 914 aaKnown RBP14.22□□□□□ -0.13
SCN1B-202ENST00000415950 H7C1D1 291 aa14.22□□□□□ -0.13
SCN1B-202ENST00000415950 PDE8BO95263 885 aa14.22□□□□□ -0.13
SCN1B-202ENST00000415950 KRT15P19012 456 aa14.22□□□□□ -0.13
SCN1B-202ENST00000415950 PEX19P40855 299 aa14.22□□□□□ -0.13
SCN1B-202ENST00000415950 CADPS2Q86UW7 1296 aa14.22□□□□□ -0.13
SCN1B-202ENST00000415950 TEX11Q8IYF3 940 aa14.22□□□□□ -0.13
SCN1B-202ENST00000415950 TRIML1Q8N9V2 468 aa14.22□□□□□ -0.13
SCN1B-202ENST00000415950 EIF3CQ99613 913 aaKnown RBP14.22□□□□□ -0.13
SCN1B-202ENST00000415950 TXNDC9O14530 226 aa14.22□□□□□ -0.13
SCN1B-202ENST00000415950 MMP1P03956 469 aa14.22□□□□□ -0.13
SCN1B-202ENST00000415950 GKAP1Q5VSY0 366 aaPredicted RBP14.22□□□□□ -0.13
SCN1B-202ENST00000415950 GSDMAQ96QA5 445 aa14.22□□□□□ -0.13
SCN1B-202ENST00000415950 ZSCAN10Q96SZ4 725 aaPredicted RBP14.22□□□□□ -0.13
SCN1B-202ENST00000415950 NUP58Q9BVL2 599 aa14.22□□□□□ -0.13
SCN1B-202ENST00000415950 PIH1D3Q9NQM4 214 aaKnown RBP14.22□□□□□ -0.13
SCN1B-202ENST00000415950 CLGNO14967 610 aa14.22□□□□□ -0.13
SCN1B-202ENST00000415950 N4BP1O75113 896 aaKnown RBP14.22□□□□□ -0.13
SCN1B-202ENST00000415950 TPD52P55327 224 aaPredicted RBP14.22□□□□□ -0.13
SCN1B-202ENST00000415950 NONOQ15233 471 aaKnown RBP eCLIP14.22□□□□□ -0.13
SCN1B-202ENST00000415950 SDCCAG8Q86SQ7 713 aaPredicted RBP14.22□□□□□ -0.13
SCN1B-202ENST00000415950 BLIDQ8IZY5 108 aa14.22□□□□□ -0.13
SCN1B-202ENST00000415950 LCORLQ8N3X6 602 aa14.22□□□□□ -0.13
SCN1B-202ENST00000415950 SMC1BQ8NDV3 1235 aa14.22□□□□□ -0.13
SCN1B-202ENST00000415950 MYO1AQ9UBC5 1043 aa14.22□□□□□ -0.13
SCN1B-202ENST00000415950 DENND2AQ9ULE3 1009 aa14.22□□□□□ -0.13
SCN1B-202ENST00000415950 SH2B2O14492 632 aaPredicted RBP14.22□□□□□ -0.13
SCN1B-202ENST00000415950 GUCY1A2P33402 732 aa14.22□□□□□ -0.13
SCN1B-202ENST00000415950 TGFBRAP1Q8WUH2 860 aa14.22□□□□□ -0.13
SCN1B-202ENST00000415950 CNOT6LQ96LI5 555 aaKnown RBP14.22□□□□□ -0.13
SCN1B-202ENST00000415950 FUCA2Q9BTY2 467 aa14.22□□□□□ -0.13
SCN1B-202ENST00000415950 CPVLQ9H3G5 476 aa14.22□□□□□ -0.13
SCN1B-202ENST00000415950 ANAPC4Q9UJX5 808 aa14.22□□□□□ -0.13
SCN1B-202ENST00000415950 AGTPBP1Q9UPW5 1226 aa14.22□□□□□ -0.13
SCN1B-202ENST00000415950 SOS2Q07890 1332 aaPredicted RBP14.21□□□□□ -0.13
SCN1B-202ENST00000415950 CLUL1Q15846 466 aa14.21□□□□□ -0.13
SCN1B-202ENST00000415950 SFMBT2Q5VUG0 894 aa14.21□□□□□ -0.13
SCN1B-202ENST00000415950 LMNTD2Q8IXW0 634 aa14.21□□□□□ -0.13
SCN1B-202ENST00000415950 PAGE5Q96GU1 130 aa14.21□□□□□ -0.13
SCN1B-202ENST00000415950 DDX23Q9BUQ8 820 aaKnown RBP14.21□□□□□ -0.13
SCN1B-202ENST00000415950 FAM114A2Q9NRY5 505 aa14.21□□□□□ -0.13
SCN1B-202ENST00000415950 CPSF2Q9P2I0 782 aaKnown RBP14.21□□□□□ -0.13
SCN1B-202ENST00000415950 ADGRG1Q9Y653 693 aa14.21□□□□□ -0.13
SCN1B-202ENST00000415950 SMCO2A6NFE2 343 aa14.21□□□□□ -0.13
SCN1B-202ENST00000415950 HSPA2P54652 639 aa14.21□□□□□ -0.13
SCN1B-202ENST00000415950 FMR1Q06787 632 aaKnown RBP eCLIP14.21□□□□□ -0.13
SCN1B-202ENST00000415950 TMCO4Q5TGY1 634 aa14.21□□□□□ -0.13
SCN1B-202ENST00000415950 CCDC84Q86UT8 332 aaPredicted RBP14.21□□□□□ -0.13
SCN1B-202ENST00000415950 OGFOD1Q8N543 542 aa14.21□□□□□ -0.13
SCN1B-202ENST00000415950 LSM14BQ9BX40 385 aaKnown RBP14.21□□□□□ -0.13
SCN1B-202ENST00000415950 MRPL44Q9H9J2 332 aaKnown RBP14.21□□□□□ -0.13
SCN1B-202ENST00000415950 MED14O60244 1454 aa14.21□□□□□ -0.13
SCN1B-202ENST00000415950 FAM205CA6NFA0 338 aa14.21□□□□□ -0.14
SCN1B-202ENST00000415950 ATP8B1O43520 1251 aa14.21□□□□□ -0.14
SCN1B-202ENST00000415950 GTPBP6O43824 516 aaPredicted RBP14.21□□□□□ -0.14
SCN1B-202ENST00000415950 MFAP3LO75121 409 aa14.21□□□□□ -0.14
SCN1B-202ENST00000415950 HEXIM1O94992 359 aaKnown RBP14.21□□□□□ -0.14
SCN1B-202ENST00000415950 CTSWP56202 376 aa14.21□□□□□ -0.14
SCN1B-202ENST00000415950 ZYXQ15942 572 aaKnown RBP14.21□□□□□ -0.14
SCN1B-202ENST00000415950 VWA3BQ502W6 1294 aa14.21□□□□□ -0.14
SCN1B-202ENST00000415950 TRIM10Q9UDY6 481 aa14.21□□□□□ -0.14
SCN1B-202ENST00000415950 HYOU1Q9Y4L1 999 aa14.21□□□□□ -0.14
SCN1B-202ENST00000415950 SCG2P13521 617 aa14.2□□□□□ -0.14
SCN1B-202ENST00000415950 TPTE2Q6XPS3 522 aa14.2□□□□□ -0.14
SCN1B-202ENST00000415950 ZNF804AQ7Z570 1209 aa14.2□□□□□ -0.14
SCN1B-202ENST00000415950 VPS52Q8N1B4 723 aa14.2□□□□□ -0.14
SCN1B-202ENST00000415950 PNMA1Q8ND90 353 aa14.2□□□□□ -0.14
SCN1B-202ENST00000415950 MIPOL1Q8TD10 442 aa14.2□□□□□ -0.14
SCN1B-202ENST00000415950 FNBP1Q96RU3 617 aa14.2□□□□□ -0.14
SCN1B-202ENST00000415950 CPSF1Q10570 1443 aaKnown RBP14.2□□□□□ -0.14
SCN1B-202ENST00000415950 PLEKHA8P1O95397 391 aa14.2□□□□□ -0.14
SCN1B-202ENST00000415950 HIBADHP31937 336 aaKnown RBP14.2□□□□□ -0.14
SCN1B-202ENST00000415950 MCAMP43121 646 aa14.2□□□□□ -0.14
SCN1B-202ENST00000415950 CUL4BQ13620 913 aa14.2□□□□□ -0.14
SCN1B-202ENST00000415950 HHATQ5VTY9 493 aa14.2□□□□□ -0.14
SCN1B-202ENST00000415950 METTL16Q86W50 562 aaKnown RBP14.2□□□□□ -0.14
SCN1B-202ENST00000415950 CHP1Q99653 195 aa14.2□□□□□ -0.14
SCN1B-202ENST00000415950 SWAP70Q9UH65 585 aa14.2□□□□□ -0.14
SCN1B-202ENST00000415950 SSX2IPQ9Y2D8 614 aa14.2□□□□□ -0.14
SCN1B-202ENST00000415950 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.2□□□□□ -0.14
SCN1B-202ENST00000415950 DDX39AO00148 427 aaKnown RBP14.2□□□□□ -0.14
SCN1B-202ENST00000415950 IFNAR1P17181 557 aa14.2□□□□□ -0.14
SCN1B-202ENST00000415950 ADD2P35612 726 aa14.2□□□□□ -0.14
SCN1B-202ENST00000415950 KCNQ4P56696 695 aa14.2□□□□□ -0.14
SCN1B-202ENST00000415950 CAPN12Q6ZSI9 719 aa14.2□□□□□ -0.14
SCN1B-202ENST00000415950 CACNA2D3Q8IZS8 1091 aa14.2□□□□□ -0.14
SCN1B-202ENST00000415950 AXIN2Q9Y2T1 843 aa14.2□□□□□ -0.14
SCN1B-202ENST00000415950 PABPN1LA6NDY0 278 aaKnown RBP14.2□□□□□ -0.14
SCN1B-202ENST00000415950 KRIT1O00522 736 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms