RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 TEX2Q8IWB9 1127 aa16.34■□□□□ 0.21
HMGA1P1-201ENST00000415560 JMYQ8N9B5 988 aa16.34■□□□□ 0.21
HMGA1P1-201ENST00000415560 OXER1Q8TDS5 423 aa16.34■□□□□ 0.21
HMGA1P1-201ENST00000415560 LEO1Q8WVC0 666 aaPredicted RBP16.34■□□□□ 0.21
HMGA1P1-201ENST00000415560 KIFC2Q96AC6 838 aa16.34■□□□□ 0.21
HMGA1P1-201ENST00000415560 COA7Q96BR5 231 aa16.34■□□□□ 0.21
HMGA1P1-201ENST00000415560 CHAMP1Q96JM3 812 aa16.34■□□□□ 0.21
HMGA1P1-201ENST00000415560 C12orf42Q96LP6 360 aa16.34■□□□□ 0.21
HMGA1P1-201ENST00000415560 USP28Q96RU2 1077 aa16.34■□□□□ 0.21
HMGA1P1-201ENST00000415560 EMILIN3Q9NT22 766 aa16.34■□□□□ 0.21
HMGA1P1-201ENST00000415560 BMP15O95972 392 aa16.33■□□□□ 0.2
HMGA1P1-201ENST00000415560 TRAPPC10P48553 1259 aa16.33■□□□□ 0.2
HMGA1P1-201ENST00000415560 FKBP1BP68106 108 aa16.33■□□□□ 0.2
HMGA1P1-201ENST00000415560 SH3D19Q5HYK7 790 aa16.33■□□□□ 0.2
HMGA1P1-201ENST00000415560 DLK2Q6UY11 383 aa16.33■□□□□ 0.2
HMGA1P1-201ENST00000415560 KRT25Q7Z3Z0 450 aa16.33■□□□□ 0.2
HMGA1P1-201ENST00000415560 KCNG4Q8TDN1 519 aa16.33■□□□□ 0.2
HMGA1P1-201ENST00000415560 CUL5Q93034 780 aa16.33■□□□□ 0.2
HMGA1P1-201ENST00000415560 SLF1Q9BQI6 1058 aa16.33■□□□□ 0.2
HMGA1P1-201ENST00000415560 TANGO6Q9C0B7 1094 aa16.33■□□□□ 0.2
HMGA1P1-201ENST00000415560 SNCAIPQ9Y6H5 919 aa16.33■□□□□ 0.2
HMGA1P1-201ENST00000415560 PHIPQ8WWQ0 1821 aa16.33■□□□□ 0.2
HMGA1P1-201ENST00000415560 CXCL11O14625 94 aa16.32■□□□□ 0.2
HMGA1P1-201ENST00000415560 ZBED4O75132 1171 aa16.32■□□□□ 0.2
HMGA1P1-201ENST00000415560 NASPP49321 788 aaPredicted RBP16.32■□□□□ 0.2
HMGA1P1-201ENST00000415560 NPY5RQ15761 445 aa16.32■□□□□ 0.2
HMGA1P1-201ENST00000415560 KLHL40Q2TBA0 621 aa16.32■□□□□ 0.2
HMGA1P1-201ENST00000415560 SHISA4Q96DD7 197 aa16.32■□□□□ 0.2
HMGA1P1-201ENST00000415560 RANBP17Q9H2T7 1088 aaKnown RBP16.32■□□□□ 0.2
HMGA1P1-201ENST00000415560 RPAP3Q9H6T3 665 aaPredicted RBP16.32■□□□□ 0.2
HMGA1P1-201ENST00000415560 PSTPIP2Q9H939 334 aa16.32■□□□□ 0.2
HMGA1P1-201ENST00000415560 RIC8AQ9NPQ8 531 aa16.32■□□□□ 0.2
HMGA1P1-201ENST00000415560 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.32■□□□□ 0.2
HMGA1P1-201ENST00000415560 PCDHA6Q9UN73 950 aa16.32■□□□□ 0.2
HMGA1P1-201ENST00000415560 PCDHA8Q9Y5H6 950 aa16.32■□□□□ 0.2
HMGA1P1-201ENST00000415560 SPTLC2O15270 562 aa16.31■□□□□ 0.2
HMGA1P1-201ENST00000415560 FLOT1O75955 427 aa16.31■□□□□ 0.2
HMGA1P1-201ENST00000415560 VCAM1P19320 739 aa16.31■□□□□ 0.2
HMGA1P1-201ENST00000415560 HMGCS2P54868 508 aa16.31■□□□□ 0.2
HMGA1P1-201ENST00000415560 SLC39A14Q15043 492 aa16.31■□□□□ 0.2
HMGA1P1-201ENST00000415560 NONOQ15233 471 aaKnown RBP eCLIP16.31■□□□□ 0.2
HMGA1P1-201ENST00000415560 TYW1BQ6NUM6 668 aa16.31■□□□□ 0.2
HMGA1P1-201ENST00000415560 PIK3AP1Q6ZUJ8 805 aa16.31■□□□□ 0.2
HMGA1P1-201ENST00000415560 REXO1Q8N1G1 1221 aaKnown RBP16.31■□□□□ 0.2
HMGA1P1-201ENST00000415560 C2orf69Q8N8R5 385 aa16.31■□□□□ 0.2
HMGA1P1-201ENST00000415560 LINC00301Q8NCQ3 95 aa16.31■□□□□ 0.2
HMGA1P1-201ENST00000415560 TNFRSF25Q93038 417 aa16.31■□□□□ 0.2
HMGA1P1-201ENST00000415560 SLC10A4Q96EP9 437 aa16.31■□□□□ 0.2
HMGA1P1-201ENST00000415560 ZNF408Q9H9D4 720 aa16.31■□□□□ 0.2
HMGA1P1-201ENST00000415560 ELP3Q9H9T3 547 aa16.31■□□□□ 0.2
HMGA1P1-201ENST00000415560 MRPL11Q9Y3B7 192 aaKnown RBP16.31■□□□□ 0.2
HMGA1P1-201ENST00000415560 CLIC4Q9Y696 253 aa16.31■□□□□ 0.2
HMGA1P1-201ENST00000415560 ABCB11O95342 1321 aa16.3■□□□□ 0.2
HMGA1P1-201ENST00000415560 USP17L15C9J2P7 530 aa16.3■□□□□ 0.2
HMGA1P1-201ENST00000415560 USP17L13C9JLJ4 530 aa16.3■□□□□ 0.2
HMGA1P1-201ENST00000415560 USP17L11C9JVI0 530 aa16.3■□□□□ 0.2
HMGA1P1-201ENST00000415560 USP17L18D6R9N7 530 aa16.3■□□□□ 0.2
HMGA1P1-201ENST00000415560 USP17L22D6RA61 530 aa16.3■□□□□ 0.2
HMGA1P1-201ENST00000415560 USP17L17D6RBQ6 530 aa16.3■□□□□ 0.2
HMGA1P1-201ENST00000415560 USP17L19D6RCP7 530 aa16.3■□□□□ 0.2
HMGA1P1-201ENST00000415560 USP17L20D6RJB6 530 aa16.3■□□□□ 0.2
HMGA1P1-201ENST00000415560 M0R2N6 131 aa16.3■□□□□ 0.2
HMGA1P1-201ENST00000415560 PPP6R2O75170 966 aa16.3■□□□□ 0.2
HMGA1P1-201ENST00000415560 POTEIP0CG38 1075 aa16.3■□□□□ 0.2
HMGA1P1-201ENST00000415560 POTEJP0CG39 1038 aa16.3■□□□□ 0.2
HMGA1P1-201ENST00000415560 ATP2B1P20020 1258 aa16.3■□□□□ 0.2
HMGA1P1-201ENST00000415560 ME1P48163 572 aa16.3■□□□□ 0.2
HMGA1P1-201ENST00000415560 USP17L24Q0WX57 530 aa16.3■□□□□ 0.2
HMGA1P1-201ENST00000415560 COG2Q14746 738 aa16.3■□□□□ 0.2
HMGA1P1-201ENST00000415560 SAMD1Q6SPF0 538 aaPredicted RBP16.3■□□□□ 0.2
HMGA1P1-201ENST00000415560 SYAP1Q96A49 352 aaPredicted RBP16.3■□□□□ 0.2
HMGA1P1-201ENST00000415560 HOXC10Q9NYD6 342 aa16.3■□□□□ 0.2
HMGA1P1-201ENST00000415560 SPDYE5A6NIY4 337 aa16.29■□□□□ 0.2
HMGA1P1-201ENST00000415560 PPP1R11O60927 126 aaPredicted RBP16.29■□□□□ 0.2
HMGA1P1-201ENST00000415560 PPIL2Q13356 520 aa16.29■□□□□ 0.2
HMGA1P1-201ENST00000415560 TTC38Q5R3I4 469 aa16.29■□□□□ 0.2
HMGA1P1-201ENST00000415560 LDLRAD1Q5T700 205 aa16.29■□□□□ 0.2
HMGA1P1-201ENST00000415560 CHADLQ6NUI6 762 aa16.29■□□□□ 0.2
HMGA1P1-201ENST00000415560 CCDC174Q6PII3 467 aa16.29■□□□□ 0.2
HMGA1P1-201ENST00000415560 PROCA1Q8NCQ7 364 aaPredicted RBP16.29■□□□□ 0.2
HMGA1P1-201ENST00000415560 ZNF526Q8TF50 670 aaPredicted RBP16.29■□□□□ 0.2
HMGA1P1-201ENST00000415560 NMRK2Q9NPI5 230 aa16.29■□□□□ 0.2
HMGA1P1-201ENST00000415560 BIN2Q9UBW5 565 aaPredicted RBP16.29■□□□□ 0.2
HMGA1P1-201ENST00000415560 PPP1R9AQ9ULJ8 1098 aa16.29■□□□□ 0.2
HMGA1P1-201ENST00000415560 OTOFQ9HC10 1997 aa16.28■□□□□ 0.2
HMGA1P1-201ENST00000415560 GADD45BO75293 160 aaPredicted RBP16.28■□□□□ 0.2
HMGA1P1-201ENST00000415560 FOSP01100 380 aaPredicted RBP16.28■□□□□ 0.2
HMGA1P1-201ENST00000415560 SNAP25P60880 206 aa16.28■□□□□ 0.2
HMGA1P1-201ENST00000415560 PABPC4Q13310 644 aaKnown RBP eCLIP16.28■□□□□ 0.2
HMGA1P1-201ENST00000415560 USH1GQ495M9 461 aa16.28■□□□□ 0.2
HMGA1P1-201ENST00000415560 JAKMIP3Q5VZ66 844 aa16.28■□□□□ 0.2
HMGA1P1-201ENST00000415560 ADALQ6DHV7 355 aa16.28■□□□□ 0.2
HMGA1P1-201ENST00000415560 CATSPERGQ6ZRH7 1159 aa16.28■□□□□ 0.2
HMGA1P1-201ENST00000415560 FASTKD5Q7L8L6 764 aaKnown RBP16.28■□□□□ 0.2
HMGA1P1-201ENST00000415560 SAMD3Q8N6K7 520 aa16.28■□□□□ 0.2
HMGA1P1-201ENST00000415560 OTUD5Q96G74 571 aa16.28■□□□□ 0.2
HMGA1P1-201ENST00000415560 NAP1L4Q99733 375 aaKnown RBP16.28■□□□□ 0.2
HMGA1P1-201ENST00000415560 GBA2Q9HCG7 927 aaPredicted RBP16.28■□□□□ 0.2
HMGA1P1-201ENST00000415560 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.28■□□□□ 0.2
HMGA1P1-201ENST00000415560 FBXO28Q9NVF7 368 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms