RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 AGBL1Q96MI9 1066 aa29.44■■■□□ 2.3
HLA-C-204ENST00000415537 TMEM47Q9BQJ4 181 aa29.44■■■□□ 2.3
HLA-C-204ENST00000415537 XPNPEP3Q9NQH7 507 aa29.44■■■□□ 2.3
HLA-C-204ENST00000415537 PRR12Q9ULL5 1215 aa29.44■■■□□ 2.3
HLA-C-204ENST00000415537 ZNF865P0CJ78 1059 aaPredicted RBP29.43■■■□□ 2.3
HLA-C-204ENST00000415537 LRRC41Q15345 812 aa29.43■■■□□ 2.3
HLA-C-204ENST00000415537 MAMDC4Q6UXC1 1216 aa29.43■■■□□ 2.3
HLA-C-204ENST00000415537 RASGRP2Q7LDG7 609 aa29.43■■■□□ 2.3
HLA-C-204ENST00000415537 TBC1D10CQ8IV04 446 aa29.43■■■□□ 2.3
HLA-C-204ENST00000415537 ESR2Q92731 530 aa29.43■■■□□ 2.3
HLA-C-204ENST00000415537 TTC14Q96N46 770 aa29.43■■■□□ 2.3
HLA-C-204ENST00000415537 ZNF536O15090 1300 aa29.43■■■□□ 2.3
HLA-C-204ENST00000415537 ALAS1P13196 640 aa29.42■■■□□ 2.3
HLA-C-204ENST00000415537 TRERF1Q96PN7 1200 aa29.42■■■□□ 2.3
HLA-C-204ENST00000415537 GDF15Q99988 308 aa29.42■■■□□ 2.3
HLA-C-204ENST00000415537 RNF146Q9NTX7 359 aa29.42■■■□□ 2.3
HLA-C-204ENST00000415537 LAMA4Q16363 1823 aa29.42■■■□□ 2.3
HLA-C-204ENST00000415537 BMP8BP34820 402 aa29.41■■■□□ 2.3
HLA-C-204ENST00000415537 SNAP25P60880 206 aa29.41■■■□□ 2.3
HLA-C-204ENST00000415537 RNF180Q86T96 592 aa29.41■■■□□ 2.3
HLA-C-204ENST00000415537 DSCC1Q9BVC3 393 aa29.41■■■□□ 2.3
HLA-C-204ENST00000415537 ZHX1Q9UKY1 873 aaPredicted RBP29.41■■■□□ 2.3
HLA-C-204ENST00000415537 SNAI1O95863 264 aaPredicted RBP29.4■■■□□ 2.3
HLA-C-204ENST00000415537 PDE4AP27815 886 aa29.4■■■□□ 2.3
HLA-C-204ENST00000415537 MAGEA10P43363 369 aaPredicted RBP29.4■■■□□ 2.3
HLA-C-204ENST00000415537 PCDH10Q9P2E7 1040 aa29.4■■■□□ 2.3
HLA-C-204ENST00000415537 CTNNA3Q9UI47 895 aa29.4■■■□□ 2.3
HLA-C-204ENST00000415537 FAM184BQ9ULE4 1060 aa29.4■■■□□ 2.3
HLA-C-204ENST00000415537 MCM3APO60318 1980 aa29.4■■■□□ 2.3
HLA-C-204ENST00000415537 POTEB2H3BUK9 544 aa29.39■■■□□ 2.3
HLA-C-204ENST00000415537 ADCYAP1R1P41586 468 aa29.39■■■□□ 2.3
HLA-C-204ENST00000415537 NT5C2P49902 561 aa29.39■■■□□ 2.3
HLA-C-204ENST00000415537 RTP1P59025 263 aa29.39■■■□□ 2.3
HLA-C-204ENST00000415537 IMMTQ16891 758 aaKnown RBP29.39■■■□□ 2.3
HLA-C-204ENST00000415537 TTC22Q5TAA0 569 aa29.39■■■□□ 2.3
HLA-C-204ENST00000415537 SLC39A5Q6ZMH5 540 aa29.39■■■□□ 2.3
HLA-C-204ENST00000415537 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.39■■■□□ 2.3
HLA-C-204ENST00000415537 CCPG1Q9ULG6 757 aa29.39■■■□□ 2.3
HLA-C-204ENST00000415537 NEDD4P46934 1319 aa29.39■■■□□ 2.3
HLA-C-204ENST00000415537 FRMPD2Q68DX3 1309 aaPredicted RBP29.39■■■□□ 2.3
HLA-C-204ENST00000415537 PGK1P00558 417 aa29.38■■■□□ 2.29
HLA-C-204ENST00000415537 SLC16A2P36021 539 aa29.38■■■□□ 2.29
HLA-C-204ENST00000415537 TTBK2Q6IQ55 1244 aa29.38■■■□□ 2.29
HLA-C-204ENST00000415537 IQCA1Q86XH1 822 aa29.38■■■□□ 2.29
HLA-C-204ENST00000415537 FERMT2Q96AC1 680 aa29.38■■■□□ 2.29
HLA-C-204ENST00000415537 ABHD16BQ9H3Z7 469 aa29.38■■■□□ 2.29
HLA-C-204ENST00000415537 GPCPD1Q9NPB8 672 aa29.38■■■□□ 2.29
HLA-C-204ENST00000415537 A1CFQ9NQ94 594 aaKnown RBP29.38■■■□□ 2.29
HLA-C-204ENST00000415537 PRKAG2Q9UGJ0 569 aa29.38■■■□□ 2.29
HLA-C-204ENST00000415537 ATP11BQ9Y2G3 1177 aa29.38■■■□□ 2.29
HLA-C-204ENST00000415537 PDHBP11177 359 aa29.37■■■□□ 2.29
HLA-C-204ENST00000415537 ACVR2BQ13705 512 aa29.37■■■□□ 2.29
HLA-C-204ENST00000415537 CCDC178Q5BJE1 867 aa29.37■■■□□ 2.29
HLA-C-204ENST00000415537 SYDE2Q5VT97 1194 aa29.37■■■□□ 2.29
HLA-C-204ENST00000415537 BTNL9Q6UXG8 535 aa29.37■■■□□ 2.29
HLA-C-204ENST00000415537 ARMCX2Q7L311 632 aa29.37■■■□□ 2.29
HLA-C-204ENST00000415537 ZKSCAN3Q9BRR0 538 aa29.37■■■□□ 2.29
HLA-C-204ENST00000415537 RANBP17Q9H2T7 1088 aaKnown RBP29.37■■■□□ 2.29
HLA-C-204ENST00000415537 DNAH12Q6ZR08 3092 aa29.36■■■□□ 2.29
HLA-C-204ENST00000415537 ICAM1P05362 532 aa29.36■■■□□ 2.29
HLA-C-204ENST00000415537 CNTN2Q02246 1040 aa29.36■■■□□ 2.29
HLA-C-204ENST00000415537 UBE2OQ9C0C9 1292 aaKnown RBP29.36■■■□□ 2.29
HLA-C-204ENST00000415537 RANBP2P49792 3224 aaKnown RBP29.35■■■□□ 2.29
HLA-C-204ENST00000415537 KDM4AO75164 1064 aa29.35■■■□□ 2.29
HLA-C-204ENST00000415537 GSPT1P15170 499 aaKnown RBP29.35■■■□□ 2.29
HLA-C-204ENST00000415537 DGKHQ86XP1 1220 aa29.35■■■□□ 2.29
HLA-C-204ENST00000415537 CCDC144CPQ8IYA2 1237 aa29.35■■■□□ 2.29
HLA-C-204ENST00000415537 FAM133AQ8N9E0 248 aa29.35■■■□□ 2.29
HLA-C-204ENST00000415537 LENG1Q96BZ8 264 aaPredicted RBP29.35■■■□□ 2.29
HLA-C-204ENST00000415537 FGD4Q96M96 766 aa29.35■■■□□ 2.29
HLA-C-204ENST00000415537 PHF24Q9UPV7 400 aa29.35■■■□□ 2.29
HLA-C-204ENST00000415537 MUM1L1Q5H9M0 696 aa29.34■■■□□ 2.29
HLA-C-204ENST00000415537 RUFY2Q8WXA3 655 aa29.34■■■□□ 2.29
HLA-C-204ENST00000415537 LBHD1Q9BQE6 289 aaPredicted RBP29.34■■■□□ 2.29
HLA-C-204ENST00000415537 ASB14A6NK59 587 aa29.33■■■□□ 2.29
HLA-C-204ENST00000415537 B4E1Z4 1266 aa29.33■■■□□ 2.29
HLA-C-204ENST00000415537 MDM2Q00987 491 aaPredicted RBP29.33■■■□□ 2.29
HLA-C-204ENST00000415537 ZNF543Q08ER8 600 aa29.33■■■□□ 2.29
HLA-C-204ENST00000415537 NSMFQ6X4W1 530 aa29.33■■■□□ 2.29
HLA-C-204ENST00000415537 KRT23Q9C075 422 aa29.33■■■□□ 2.29
HLA-C-204ENST00000415537 DUSP11O75319 330 aaKnown RBP29.32■■■□□ 2.28
HLA-C-204ENST00000415537 CCDC144BQ3MJ40 725 aa29.32■■■□□ 2.28
HLA-C-204ENST00000415537 TSEN34Q9BSV6 310 aaKnown RBP29.32■■■□□ 2.28
HLA-C-204ENST00000415537 CNNM2Q9H8M5 875 aa29.32■■■□□ 2.28
HLA-C-204ENST00000415537 SPC25Q9HBM1 224 aa29.32■■■□□ 2.28
HLA-C-204ENST00000415537 CYP39A1Q9NYL5 469 aa29.32■■■□□ 2.28
HLA-C-204ENST00000415537 PNMA2Q9UL42 364 aa29.32■■■□□ 2.28
HLA-C-204ENST00000415537 RAD50Q92878 1312 aa29.31■■■□□ 2.28
HLA-C-204ENST00000415537 SYNRGQ9UMZ2 1314 aa29.31■■■□□ 2.28
HLA-C-204ENST00000415537 ADAMTS4O75173 837 aa29.31■■■□□ 2.28
HLA-C-204ENST00000415537 SNX17Q15036 470 aa29.31■■■□□ 2.28
HLA-C-204ENST00000415537 TRIM60Q495X7 471 aa29.31■■■□□ 2.28
HLA-C-204ENST00000415537 GPATCH4Q5T3I0 446 aaKnown RBP29.31■■■□□ 2.28
HLA-C-204ENST00000415537 C1orf53Q5VUE5 145 aa29.31■■■□□ 2.28
HLA-C-204ENST00000415537 TDHQ8IZJ6 230 aa29.31■■■□□ 2.28
HLA-C-204ENST00000415537 KAT14Q9H8E8 782 aa29.31■■■□□ 2.28
HLA-C-204ENST00000415537 SOWAHBA6NEL2 793 aa29.3■■■□□ 2.28
HLA-C-204ENST00000415537 SNHG28P0DPA3 235 aa29.3■■■□□ 2.28
HLA-C-204ENST00000415537 PNMA1Q8ND90 353 aa29.3■■■□□ 2.28
HLA-C-204ENST00000415537 ZSCAN10Q96SZ4 725 aaPredicted RBP29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms