RNA–Protein interactions for RNA: ENST00000414883.1

A1CF-208, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-208ENST00000414883 DIS3Q9Y2L1 958 aaKnown RBP12.88□□□□□ -0.35
A1CF-208ENST00000414883 PFASO15067 1338 aa12.88□□□□□ -0.35
A1CF-208ENST00000414883 FDX1P10109 184 aa12.87□□□□□ -0.35
A1CF-208ENST00000414883 COL6A1P12109 1028 aa12.87□□□□□ -0.35
A1CF-208ENST00000414883 TAL1P17542 331 aaPredicted RBP12.87□□□□□ -0.35
A1CF-208ENST00000414883 NT5C2P49902 561 aa12.87□□□□□ -0.35
A1CF-208ENST00000414883 IMMTQ16891 758 aaKnown RBP12.87□□□□□ -0.35
A1CF-208ENST00000414883 PRAMEF19Q5SWL8 479 aa12.87□□□□□ -0.35
A1CF-208ENST00000414883 CYB5R4Q7L1T6 521 aa12.87□□□□□ -0.35
A1CF-208ENST00000414883 DGKHQ86XP1 1220 aa12.87□□□□□ -0.35
A1CF-208ENST00000414883 RANBP17Q9H2T7 1088 aaKnown RBP12.87□□□□□ -0.35
A1CF-208ENST00000414883 MTMR7Q9Y216 660 aa12.87□□□□□ -0.35
A1CF-208ENST00000414883 LRRC37A2A6NM11 1700 aa12.86□□□□□ -0.35
A1CF-208ENST00000414883 SLC16A2P36021 539 aa12.86□□□□□ -0.35
A1CF-208ENST00000414883 ZNF543Q08ER8 600 aa12.86□□□□□ -0.35
A1CF-208ENST00000414883 COL9A3Q14050 684 aaPredicted RBP12.86□□□□□ -0.35
A1CF-208ENST00000414883 KCTD2Q14681 263 aa12.86□□□□□ -0.35
A1CF-208ENST00000414883 SEC23AQ15436 765 aa12.86□□□□□ -0.35
A1CF-208ENST00000414883 STOX1Q6ZVD7 989 aa12.86□□□□□ -0.35
A1CF-208ENST00000414883 RUFY2Q8WXA3 655 aa12.86□□□□□ -0.35
A1CF-208ENST00000414883 MAP4K1Q92918 833 aa12.86□□□□□ -0.35
A1CF-208ENST00000414883 TINF2Q9BSI4 451 aa12.86□□□□□ -0.35
A1CF-208ENST00000414883 DDX20Q9UHI6 824 aaKnown RBP12.86□□□□□ -0.35
A1CF-208ENST00000414883 MYH6P13533 1939 aa12.86□□□□□ -0.35
A1CF-208ENST00000414883 ASTN1O14525 1302 aa12.86□□□□□ -0.35
A1CF-208ENST00000414883 FRMPD2Q68DX3 1309 aaPredicted RBP12.86□□□□□ -0.35
A1CF-208ENST00000414883 BAZ2BQ9UIF8 2168 aaKnown RBP12.86□□□□□ -0.35
A1CF-208ENST00000414883 H0YGN5 161 aa12.85□□□□□ -0.35
A1CF-208ENST00000414883 SEPT4O43236 478 aa12.85□□□□□ -0.35
A1CF-208ENST00000414883 SNAI1O95863 264 aaPredicted RBP12.85□□□□□ -0.35
A1CF-208ENST00000414883 ZNF865P0CJ78 1059 aaPredicted RBP12.85□□□□□ -0.35
A1CF-208ENST00000414883 CCDC96Q2M329 555 aa12.85□□□□□ -0.35
A1CF-208ENST00000414883 BMP2KLQ5H9B9 411 aa12.85□□□□□ -0.35
A1CF-208ENST00000414883 MUM1L1Q5H9M0 696 aa12.85□□□□□ -0.35
A1CF-208ENST00000414883 SYDE2Q5VT97 1194 aa12.85□□□□□ -0.35
A1CF-208ENST00000414883 MAMDC4Q6UXC1 1216 aa12.85□□□□□ -0.35
A1CF-208ENST00000414883 CHST13Q8NET6 341 aa12.85□□□□□ -0.35
A1CF-208ENST00000414883 ZSCAN10Q96SZ4 725 aaPredicted RBP12.85□□□□□ -0.35
A1CF-208ENST00000414883 LSG1Q9H089 658 aaKnown RBP12.85□□□□□ -0.35
A1CF-208ENST00000414883 GPCPD1Q9NPB8 672 aa12.85□□□□□ -0.35
A1CF-208ENST00000414883 A1CFQ9NQ94 594 aaKnown RBP12.85□□□□□ -0.35
A1CF-208ENST00000414883 TNKSO95271 1327 aa12.85□□□□□ -0.35
A1CF-208ENST00000414883 ICAM1P05362 532 aa12.84□□□□□ -0.35
A1CF-208ENST00000414883 VASPP50552 380 aaPredicted RBP12.84□□□□□ -0.35
A1CF-208ENST00000414883 CNTN2Q02246 1040 aa12.84□□□□□ -0.35
A1CF-208ENST00000414883 IKQ13123 557 aaPredicted RBP12.84□□□□□ -0.35
A1CF-208ENST00000414883 CCDC174Q6PII3 467 aa12.84□□□□□ -0.35
A1CF-208ENST00000414883 NECAB2Q7Z6G3 386 aa12.84□□□□□ -0.35
A1CF-208ENST00000414883 ZNF467Q7Z7K2 595 aaPredicted RBP12.84□□□□□ -0.35
A1CF-208ENST00000414883 FAM133AQ8N9E0 248 aa12.84□□□□□ -0.35
A1CF-208ENST00000414883 PNMA1Q8ND90 353 aa12.84□□□□□ -0.35
A1CF-208ENST00000414883 ESYT1Q9BSJ8 1104 aa12.84□□□□□ -0.35
A1CF-208ENST00000414883 KRT23Q9C075 422 aa12.84□□□□□ -0.35
A1CF-208ENST00000414883 KATNBL1Q9H079 304 aa12.84□□□□□ -0.35
A1CF-208ENST00000414883 CPVLQ9H3G5 476 aa12.84□□□□□ -0.35
A1CF-208ENST00000414883 CNNM2Q9H8M5 875 aa12.84□□□□□ -0.35
A1CF-208ENST00000414883 HOMER2Q9NSB8 354 aa12.84□□□□□ -0.35
A1CF-208ENST00000414883 RNF146Q9NTX7 359 aa12.84□□□□□ -0.35
A1CF-208ENST00000414883 SLC5A4Q9NY91 659 aa12.84□□□□□ -0.35
A1CF-208ENST00000414883 FBXO40Q9UH90 709 aa12.84□□□□□ -0.35
A1CF-208ENST00000414883 NRBP1Q9UHY1 535 aa12.84□□□□□ -0.35
A1CF-208ENST00000414883 SYNGAP1Q96PV0 1343 aa12.84□□□□□ -0.35
A1CF-208ENST00000414883 SOWAHBA6NEL2 793 aa12.83□□□□□ -0.36
A1CF-208ENST00000414883 E7EWF7 191 aa12.83□□□□□ -0.36
A1CF-208ENST00000414883 MSCO60682 206 aa12.83□□□□□ -0.36
A1CF-208ENST00000414883 GOLGA8HP0CJ92 632 aa12.83□□□□□ -0.36
A1CF-208ENST00000414883 SLC4A3P48751 1232 aa12.83□□□□□ -0.36
A1CF-208ENST00000414883 ANTXR2P58335 489 aa12.83□□□□□ -0.36
A1CF-208ENST00000414883 TKFCQ3LXA3 575 aa12.83□□□□□ -0.36
A1CF-208ENST00000414883 ANO1Q5XXA6 986 aa12.83□□□□□ -0.36
A1CF-208ENST00000414883 IQCA1Q86XH1 822 aa12.83□□□□□ -0.36
A1CF-208ENST00000414883 MSL3Q8N5Y2 521 aaKnown RBP12.83□□□□□ -0.36
A1CF-208ENST00000414883 CLEC4DQ8WXI8 215 aa12.83□□□□□ -0.36
A1CF-208ENST00000414883 TRERF1Q96PN7 1200 aa12.83□□□□□ -0.36
A1CF-208ENST00000414883 HTATIP2Q9BUP3 242 aa12.83□□□□□ -0.36
A1CF-208ENST00000414883 ACAD9Q9H845 621 aa12.83□□□□□ -0.36
A1CF-208ENST00000414883 SENP2Q9HC62 589 aa12.83□□□□□ -0.36
A1CF-208ENST00000414883 ISY1Q9ULR0 285 aaKnown RBP12.83□□□□□ -0.36
A1CF-208ENST00000414883 RBM8AQ9Y5S9 174 aaKnown RBP12.83□□□□□ -0.36
A1CF-208ENST00000414883 ADCY6O43306 1168 aa12.82□□□□□ -0.36
A1CF-208ENST00000414883 ALAS1P13196 640 aa12.82□□□□□ -0.36
A1CF-208ENST00000414883 CNGA1P29973 690 aa12.82□□□□□ -0.36
A1CF-208ENST00000414883 SLC35G1Q2M3R5 365 aa12.82□□□□□ -0.36
A1CF-208ENST00000414883 CCDC178Q5BJE1 867 aa12.82□□□□□ -0.36
A1CF-208ENST00000414883 ANKRD35Q8N283 1001 aa12.82□□□□□ -0.36
A1CF-208ENST00000414883 DPF3Q92784 378 aa12.82□□□□□ -0.36
A1CF-208ENST00000414883 DDX11Q96FC9 970 aa12.82□□□□□ -0.36
A1CF-208ENST00000414883 PRO3102Q9H379 93 aa12.82□□□□□ -0.36
A1CF-208ENST00000414883 C11orf49Q9H6J7 331 aa12.82□□□□□ -0.36
A1CF-208ENST00000414883 CYP39A1Q9NYL5 469 aa12.82□□□□□ -0.36
A1CF-208ENST00000414883 CCPG1Q9ULG6 757 aa12.82□□□□□ -0.36
A1CF-208ENST00000414883 SSUH2Q9Y2M2 353 aa12.82□□□□□ -0.36
A1CF-208ENST00000414883 CTDP1Q9Y5B0 961 aaPredicted RBP12.82□□□□□ -0.36
A1CF-208ENST00000414883 DDX49Q9Y6V7 483 aaKnown RBP12.82□□□□□ -0.36
A1CF-208ENST00000414883 NFIBO00712 420 aa12.81□□□□□ -0.36
A1CF-208ENST00000414883 LRRC26Q2I0M4 334 aa12.81□□□□□ -0.36
A1CF-208ENST00000414883 GPATCH4Q5T3I0 446 aaKnown RBP12.81□□□□□ -0.36
A1CF-208ENST00000414883 MB21D2Q8IYB1 491 aaPredicted RBP12.81□□□□□ -0.36
A1CF-208ENST00000414883 LENG1Q96BZ8 264 aaPredicted RBP12.81□□□□□ -0.36
A1CF-208ENST00000414883 PURBQ96QR8 312 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms