RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 TRIM22Q8IYM9 498 aa15.19■□□□□ 0.02
CNOT4-204ENST00000414802 RRP36Q96EU6 259 aaKnown RBP15.19■□□□□ 0.02
CNOT4-204ENST00000414802 LLPHQ9BRT6 129 aaKnown RBP15.19■□□□□ 0.02
CNOT4-204ENST00000414802 PAGR1Q9BTK6 254 aa15.19■□□□□ 0.02
CNOT4-204ENST00000414802 RNF26Q9BY78 433 aaPredicted RBP15.19■□□□□ 0.02
CNOT4-204ENST00000414802 RANBP17Q9H2T7 1088 aaKnown RBP15.19■□□□□ 0.02
CNOT4-204ENST00000414802 PNMA3Q9UL41 463 aa15.19■□□□□ 0.02
CNOT4-204ENST00000414802 SMC3Q9UQE7 1217 aa15.19■□□□□ 0.02
CNOT4-204ENST00000414802 STK36Q9NRP7 1315 aa15.18■□□□□ 0.02
CNOT4-204ENST00000414802 VWA5AO00534 786 aa15.18■□□□□ 0.02
CNOT4-204ENST00000414802 PRPF3O43395 683 aaKnown RBP15.18■□□□□ 0.02
CNOT4-204ENST00000414802 PPP1R11O60927 126 aaPredicted RBP15.18■□□□□ 0.02
CNOT4-204ENST00000414802 GJB2P29033 226 aa15.18■□□□□ 0.02
CNOT4-204ENST00000414802 AKAP17AQ02040 695 aaKnown RBP15.18■□□□□ 0.02
CNOT4-204ENST00000414802 TAF1CQ15572 869 aaPredicted RBP15.18■□□□□ 0.02
CNOT4-204ENST00000414802 PKN1Q16512 942 aa15.18■□□□□ 0.02
CNOT4-204ENST00000414802 MTMR8Q96EF0 704 aa15.18■□□□□ 0.02
CNOT4-204ENST00000414802 SLC38A10Q9HBR0 1119 aa15.18■□□□□ 0.02
CNOT4-204ENST00000414802 SEC63Q9UGP8 760 aaKnown RBP15.18■□□□□ 0.02
CNOT4-204ENST00000414802 SLC45A1Q9Y2W3 748 aa15.18■□□□□ 0.02
CNOT4-204ENST00000414802 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.18■□□□□ 0.02
CNOT4-204ENST00000414802 PLXNA1Q9UIW2 1896 aa15.18■□□□□ 0.02
CNOT4-204ENST00000414802 ZBTB5O15062 677 aa15.17■□□□□ 0.02
CNOT4-204ENST00000414802 SMARCA1P28370 1054 aa15.17■□□□□ 0.02
CNOT4-204ENST00000414802 USH1GQ495M9 461 aa15.17■□□□□ 0.02
CNOT4-204ENST00000414802 CPXCR1Q8N123 301 aa15.17■□□□□ 0.02
CNOT4-204ENST00000414802 REPS2Q8NFH8 660 aa15.17■□□□□ 0.02
CNOT4-204ENST00000414802 SMCR8Q8TEV9 937 aaPredicted RBP15.17■□□□□ 0.02
CNOT4-204ENST00000414802 PARK7Q99497 189 aaKnown RBP15.17■□□□□ 0.02
CNOT4-204ENST00000414802 RAVER2Q9HCJ3 691 aaKnown RBP15.17■□□□□ 0.02
CNOT4-204ENST00000414802 CTDP1Q9Y5B0 961 aaPredicted RBP15.17■□□□□ 0.02
CNOT4-204ENST00000414802 MYPNQ86TC9 1320 aa15.17■□□□□ 0.02
CNOT4-204ENST00000414802 PNMA6FA0A0J9YX94 578 aa15.16■□□□□ 0.02
CNOT4-204ENST00000414802 ZBED4O75132 1171 aa15.16■□□□□ 0.02
CNOT4-204ENST00000414802 CNMDO75829 334 aa15.16■□□□□ 0.02
CNOT4-204ENST00000414802 TM4SF4P48230 202 aa15.16■□□□□ 0.02
CNOT4-204ENST00000414802 WWC2Q6AWC2 1192 aa15.16■□□□□ 0.02
CNOT4-204ENST00000414802 HEATR3Q7Z4Q2 680 aa15.16■□□□□ 0.02
CNOT4-204ENST00000414802 COA7Q96BR5 231 aa15.16■□□□□ 0.02
CNOT4-204ENST00000414802 SHISA4Q96DD7 197 aa15.16■□□□□ 0.02
CNOT4-204ENST00000414802 AGBL1Q96MI9 1066 aa15.16■□□□□ 0.02
CNOT4-204ENST00000414802 TXNRD2Q9NNW7 524 aa15.16■□□□□ 0.02
CNOT4-204ENST00000414802 GJB4Q9NTQ9 266 aa15.16■□□□□ 0.02
CNOT4-204ENST00000414802 HOXC10Q9NYD6 342 aa15.16■□□□□ 0.02
CNOT4-204ENST00000414802 BTBD7Q9P203 1132 aa15.16■□□□□ 0.02
CNOT4-204ENST00000414802 ZNF536O15090 1300 aa15.16■□□□□ 0.02
CNOT4-204ENST00000414802 MYH7BA7E2Y1 1941 aa15.16■□□□□ 0.02
CNOT4-204ENST00000414802 DEXIO95424 95 aa15.16■□□□□ 0.02
CNOT4-204ENST00000414802 SCG2P13521 617 aa15.16■□□□□ 0.02
CNOT4-204ENST00000414802 INHBEP58166 350 aa15.16■□□□□ 0.02
CNOT4-204ENST00000414802 HMGN5P82970 282 aaKnown RBP15.16■□□□□ 0.02
CNOT4-204ENST00000414802 PLS1Q14651 629 aa15.16■□□□□ 0.02
CNOT4-204ENST00000414802 TMEM132BQ14DG7 1078 aa15.16■□□□□ 0.02
CNOT4-204ENST00000414802 PFKFB3Q16875 520 aaPredicted RBP15.16■□□□□ 0.02
CNOT4-204ENST00000414802 FAM184AQ8NB25 1140 aa15.16■□□□□ 0.02
CNOT4-204ENST00000414802 INTS4Q96HW7 963 aaKnown RBP15.16■□□□□ 0.02
CNOT4-204ENST00000414802 ALG1Q9BT22 464 aa15.16■□□□□ 0.02
CNOT4-204ENST00000414802 VPS54Q9P1Q0 977 aa15.16■□□□□ 0.02
CNOT4-204ENST00000414802 ADAMTS5Q9UNA0 930 aa15.16■□□□□ 0.02
CNOT4-204ENST00000414802 MCM3APO60318 1980 aa15.15■□□□□ 0.02
CNOT4-204ENST00000414802 OTUD7BQ6GQQ9 843 aa15.15■□□□□ 0.02
CNOT4-204ENST00000414802 TYW1BQ6NUM6 668 aa15.15■□□□□ 0.02
CNOT4-204ENST00000414802 LBX2Q6XYB7 198 aa15.15■□□□□ 0.02
CNOT4-204ENST00000414802 FBXO11Q86XK2 927 aa15.15■□□□□ 0.02
CNOT4-204ENST00000414802 HOMER2Q9NSB8 354 aa15.15■□□□□ 0.02
CNOT4-204ENST00000414802 ZNF214Q9UL59 606 aaPredicted RBP15.15■□□□□ 0.02
CNOT4-204ENST00000414802 CCPG1Q9ULG6 757 aa15.15■□□□□ 0.02
CNOT4-204ENST00000414802 ADGRA2Q96PE1 1338 aa15.15■□□□□ 0.02
CNOT4-204ENST00000414802 STXBP3O00186 592 aa15.14■□□□□ 0.01
CNOT4-204ENST00000414802 GUCY1B3Q02153 619 aa15.14■□□□□ 0.01
CNOT4-204ENST00000414802 CRHR2Q13324 411 aa15.14■□□□□ 0.01
CNOT4-204ENST00000414802 SNRNP48Q6IEG0 339 aaKnown RBP15.14■□□□□ 0.01
CNOT4-204ENST00000414802 ANKRD13CQ8N6S4 541 aa15.14■□□□□ 0.01
CNOT4-204ENST00000414802 ZCCHC17Q9NP64 241 aaKnown RBP15.14■□□□□ 0.01
CNOT4-204ENST00000414802 RBM27Q9P2N5 1060 aaKnown RBP15.14■□□□□ 0.01
CNOT4-204ENST00000414802 RBPJLQ9UBG7 517 aa15.14■□□□□ 0.01
CNOT4-204ENST00000414802 DAXXQ9UER7 740 aaPredicted RBP15.14■□□□□ 0.01
CNOT4-204ENST00000414802 CPA4Q9UI42 421 aa15.14■□□□□ 0.01
CNOT4-204ENST00000414802 TCHHQ07283 1943 aa15.14■□□□□ 0.01
CNOT4-204ENST00000414802 ICAM1P05362 532 aa15.13■□□□□ 0.01
CNOT4-204ENST00000414802 ALAS1P13196 640 aa15.13■□□□□ 0.01
CNOT4-204ENST00000414802 MAP2K2P36507 400 aa15.13■□□□□ 0.01
CNOT4-204ENST00000414802 NAPAP54920 295 aa15.13■□□□□ 0.01
CNOT4-204ENST00000414802 MB21D1Q8N884 522 aa15.13■□□□□ 0.01
CNOT4-204ENST00000414802 IPO9Q96P70 1041 aaKnown RBP15.13■□□□□ 0.01
CNOT4-204ENST00000414802 AMNQ9BXJ7 453 aa15.13■□□□□ 0.01
CNOT4-204ENST00000414802 R3HDMLQ9H3Y0 253 aa15.13■□□□□ 0.01
CNOT4-204ENST00000414802 PCDHA1Q9Y5I3 950 aa15.13■□□□□ 0.01
CNOT4-204ENST00000414802 ECM2O94769 699 aaPredicted RBP15.12■□□□□ 0.01
CNOT4-204ENST00000414802 FDX1P10109 184 aa15.12■□□□□ 0.01
CNOT4-204ENST00000414802 ERVK-9P63128 1117 aa15.12■□□□□ 0.01
CNOT4-204ENST00000414802 ERVK-24P63145 666 aa15.12■□□□□ 0.01
CNOT4-204ENST00000414802 Q3C1V9 767 aa15.12■□□□□ 0.01
CNOT4-204ENST00000414802 WASF1Q92558 559 aa15.12■□□□□ 0.01
CNOT4-204ENST00000414802 SPATC1LQ9H0A9 340 aa15.12■□□□□ 0.01
CNOT4-204ENST00000414802 BARHL2Q9NY43 387 aa15.12■□□□□ 0.01
CNOT4-204ENST00000414802 KCNJ14Q9UNX9 436 aa15.12■□□□□ 0.01
CNOT4-204ENST00000414802 RIPK3Q9Y572 518 aa15.12■□□□□ 0.01
CNOT4-204ENST00000414802 STAT3P40763 770 aa15.12■□□□□ 0.01
CNOT4-204ENST00000414802 GTF3C2Q8WUA4 911 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms