RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 LEXMQ3ZCV2 418 aa16.24■□□□□ 0.19
RAPGEF1-204ENST00000414781 MAMDC4Q6UXC1 1216 aa16.24■□□□□ 0.19
RAPGEF1-204ENST00000414781 SH2D4AQ9H788 454 aa16.24■□□□□ 0.19
RAPGEF1-204ENST00000414781 UBE2ZQ9H832 354 aaPredicted RBP16.24■□□□□ 0.19
RAPGEF1-204ENST00000414781 KIF28PB7ZC32 967 aa16.23■□□□□ 0.19
RAPGEF1-204ENST00000414781 SNAI1O95863 264 aaPredicted RBP16.23■□□□□ 0.19
RAPGEF1-204ENST00000414781 ACTN1P12814 892 aa16.23■□□□□ 0.19
RAPGEF1-204ENST00000414781 NKX3-2P78367 333 aa16.23■□□□□ 0.19
RAPGEF1-204ENST00000414781 PUS10Q3MIT2 529 aaKnown RBP16.23■□□□□ 0.19
RAPGEF1-204ENST00000414781 ZNF467Q7Z7K2 595 aaPredicted RBP16.23■□□□□ 0.19
RAPGEF1-204ENST00000414781 MFSD14AQ96MC6 490 aa16.23■□□□□ 0.19
RAPGEF1-204ENST00000414781 WNT8AQ9H1J5 351 aa16.23■□□□□ 0.19
RAPGEF1-204ENST00000414781 ADAMTS5Q9UNA0 930 aa16.23■□□□□ 0.19
RAPGEF1-204ENST00000414781 ZDBF2Q9HCK1 2354 aa16.23■□□□□ 0.19
RAPGEF1-204ENST00000414781 WDR46O15213 610 aaKnown RBP16.22■□□□□ 0.19
RAPGEF1-204ENST00000414781 STAT3P40763 770 aa16.22■□□□□ 0.19
RAPGEF1-204ENST00000414781 ACVR2BQ13705 512 aa16.22■□□□□ 0.19
RAPGEF1-204ENST00000414781 CHD1LQ86WJ1 897 aa16.22■□□□□ 0.19
RAPGEF1-204ENST00000414781 CLASRPQ8N2M8 674 aaKnown RBP16.22■□□□□ 0.19
RAPGEF1-204ENST00000414781 RHPN1Q8TCX5 695 aa16.22■□□□□ 0.19
RAPGEF1-204ENST00000414781 ABHD16BQ9H3Z7 469 aa16.22■□□□□ 0.19
RAPGEF1-204ENST00000414781 BRWD1Q9NSI6 2320 aa16.22■□□□□ 0.19
RAPGEF1-204ENST00000414781 MPHOSPH10O00566 681 aaKnown RBP16.21■□□□□ 0.19
RAPGEF1-204ENST00000414781 SAMD1Q6SPF0 538 aaPredicted RBP16.21■□□□□ 0.19
RAPGEF1-204ENST00000414781 TMEM179Q6ZVK1 233 aa16.21■□□□□ 0.19
RAPGEF1-204ENST00000414781 MAGEB6Q8N7X4 407 aa16.21■□□□□ 0.19
RAPGEF1-204ENST00000414781 ARHGEF10LQ9HCE6 1279 aa16.21■□□□□ 0.19
RAPGEF1-204ENST00000414781 ZNF536O15090 1300 aa16.2■□□□□ 0.18
RAPGEF1-204ENST00000414781 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.2■□□□□ 0.18
RAPGEF1-204ENST00000414781 POTEB3A0JP26 581 aa16.2■□□□□ 0.18
RAPGEF1-204ENST00000414781 LPXNO60711 386 aa16.2■□□□□ 0.18
RAPGEF1-204ENST00000414781 DYNLL1P63167 89 aaKnown RBP16.2■□□□□ 0.18
RAPGEF1-204ENST00000414781 ITGA7Q13683 1181 aa16.2■□□□□ 0.18
RAPGEF1-204ENST00000414781 TTLL4Q14679 1199 aa16.2■□□□□ 0.18
RAPGEF1-204ENST00000414781 CCDC144BQ3MJ40 725 aa16.2■□□□□ 0.18
RAPGEF1-204ENST00000414781 POTEBQ6S5H4 581 aa16.2■□□□□ 0.18
RAPGEF1-204ENST00000414781 VCPKMTQ9H867 229 aa16.2■□□□□ 0.18
RAPGEF1-204ENST00000414781 GPR108Q9NPR9 543 aa16.2■□□□□ 0.18
RAPGEF1-204ENST00000414781 CDK5RAP2Q96SN8 1893 aa16.2■□□□□ 0.18
RAPGEF1-204ENST00000414781 CYP7A1P22680 504 aa16.19■□□□□ 0.18
RAPGEF1-204ENST00000414781 PTPN5P54829 565 aa16.19■□□□□ 0.18
RAPGEF1-204ENST00000414781 IRX5P78411 483 aaPredicted RBP16.19■□□□□ 0.18
RAPGEF1-204ENST00000414781 PTCRAQ6ISU1 281 aaPredicted RBP16.19■□□□□ 0.18
RAPGEF1-204ENST00000414781 TMED8Q6PL24 325 aaPredicted RBP16.19■□□□□ 0.18
RAPGEF1-204ENST00000414781 HERC6Q8IVU3 1022 aa16.19■□□□□ 0.18
RAPGEF1-204ENST00000414781 VWCEQ96DN2 955 aa16.19■□□□□ 0.18
RAPGEF1-204ENST00000414781 DDX11Q96FC9 970 aa16.19■□□□□ 0.18
RAPGEF1-204ENST00000414781 AGBL1Q96MI9 1066 aa16.19■□□□□ 0.18
RAPGEF1-204ENST00000414781 PRRX2Q99811 253 aa16.19■□□□□ 0.18
RAPGEF1-204ENST00000414781 SNRKQ9NRH2 765 aa16.19■□□□□ 0.18
RAPGEF1-204ENST00000414781 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.19■□□□□ 0.18
RAPGEF1-204ENST00000414781 ZNF214Q9UL59 606 aaPredicted RBP16.19■□□□□ 0.18
RAPGEF1-204ENST00000414781 TMX2Q9Y320 296 aa16.19■□□□□ 0.18
RAPGEF1-204ENST00000414781 ZNF318Q5VUA4 2279 aa16.19■□□□□ 0.18
RAPGEF1-204ENST00000414781 VWA5AO00534 786 aa16.18■□□□□ 0.18
RAPGEF1-204ENST00000414781 CTAGE5O15320 804 aa16.18■□□□□ 0.18
RAPGEF1-204ENST00000414781 ADCY6O43306 1168 aa16.18■□□□□ 0.18
RAPGEF1-204ENST00000414781 ZEB2O60315 1214 aa16.18■□□□□ 0.18
RAPGEF1-204ENST00000414781 CYP2E1P05181 493 aaPredicted RBP16.18■□□□□ 0.18
RAPGEF1-204ENST00000414781 KCNA5P22460 613 aa16.18■□□□□ 0.18
RAPGEF1-204ENST00000414781 RFC2P35250 354 aa16.18■□□□□ 0.18
RAPGEF1-204ENST00000414781 GABPAQ06546 454 aa16.18■□□□□ 0.18
RAPGEF1-204ENST00000414781 KIAA1755Q5JYT7 1200 aa16.18■□□□□ 0.18
RAPGEF1-204ENST00000414781 TTC39AQ5SRH9 613 aa16.18■□□□□ 0.18
RAPGEF1-204ENST00000414781 CXCL17Q6UXB2 119 aa16.18■□□□□ 0.18
RAPGEF1-204ENST00000414781 SPICE1Q8N0Z3 855 aa16.18■□□□□ 0.18
RAPGEF1-204ENST00000414781 SCLYQ96I15 445 aa16.18■□□□□ 0.18
RAPGEF1-204ENST00000414781 TRPV6Q9H1D0 765 aa16.18■□□□□ 0.18
RAPGEF1-204ENST00000414781 FAM50BQ9Y247 325 aa16.18■□□□□ 0.18
RAPGEF1-204ENST00000414781 DNAJC25-GNG10A0A024R161 153 aa16.17■□□□□ 0.18
RAPGEF1-204ENST00000414781 GRXCR2A6NFK2 248 aa16.17■□□□□ 0.18
RAPGEF1-204ENST00000414781 B4GALT4O60513 344 aa16.17■□□□□ 0.18
RAPGEF1-204ENST00000414781 POLR3DP05423 398 aaPredicted RBP16.17■□□□□ 0.18
RAPGEF1-204ENST00000414781 IFIT2P09913 472 aaKnown RBP16.17■□□□□ 0.18
RAPGEF1-204ENST00000414781 SUPT20HL2P0C7V6 817 aa16.17■□□□□ 0.18
RAPGEF1-204ENST00000414781 PLCD1P51178 756 aa16.17■□□□□ 0.18
RAPGEF1-204ENST00000414781 CCDC158Q5M9N0 1113 aa16.17■□□□□ 0.18
RAPGEF1-204ENST00000414781 HFE2Q6ZVN8 426 aa16.17■□□□□ 0.18
RAPGEF1-204ENST00000414781 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.17■□□□□ 0.18
RAPGEF1-204ENST00000414781 TEX13BQ9BXU2 312 aa16.17■□□□□ 0.18
RAPGEF1-204ENST00000414781 LNPKQ9C0E8 428 aa16.17■□□□□ 0.18
RAPGEF1-204ENST00000414781 PPP1R9AQ9ULJ8 1098 aa16.17■□□□□ 0.18
RAPGEF1-204ENST00000414781 ARHGEF15O94989 841 aa16.16■□□□□ 0.18
RAPGEF1-204ENST00000414781 IL9P15248 144 aa16.16■□□□□ 0.18
RAPGEF1-204ENST00000414781 ICA1Q05084 483 aa16.16■□□□□ 0.18
RAPGEF1-204ENST00000414781 MIGA1Q8NAN2 632 aa16.16■□□□□ 0.18
RAPGEF1-204ENST00000414781 GPATCH3Q96I76 525 aa16.16■□□□□ 0.18
RAPGEF1-204ENST00000414781 UPF3BQ9BZI7 483 aaKnown RBP16.16■□□□□ 0.18
RAPGEF1-204ENST00000414781 IL1RAPL2Q9NP60 686 aa16.16■□□□□ 0.18
RAPGEF1-204ENST00000414781 PRKAG3Q9UGI9 489 aa16.16■□□□□ 0.18
RAPGEF1-204ENST00000414781 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.16■□□□□ 0.18
RAPGEF1-204ENST00000414781 ZNFX1Q9P2E3 1918 aaKnown RBP16.15■□□□□ 0.18
RAPGEF1-204ENST00000414781 WDFY4Q6ZS81 3184 aa16.15■□□□□ 0.18
RAPGEF1-204ENST00000414781 BEX3Q00994 111 aa16.15■□□□□ 0.18
RAPGEF1-204ENST00000414781 PKN1Q16512 942 aa16.15■□□□□ 0.18
RAPGEF1-204ENST00000414781 FSCN1Q16658 493 aaKnown RBP16.15■□□□□ 0.18
RAPGEF1-204ENST00000414781 TNNI3KQ59H18 835 aa16.15■□□□□ 0.18
RAPGEF1-204ENST00000414781 DEFB128Q7Z7B8 93 aa16.15■□□□□ 0.18
RAPGEF1-204ENST00000414781 AACSQ86V21 672 aa16.15■□□□□ 0.18
RAPGEF1-204ENST00000414781 REPS2Q8NFH8 660 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms