RNA–Protein interactions for RNA: ENST00000414044.1

VTA1P1-201, Transcript of vesicle trafficking 1 pseudogene 1, humanhuman

BASIC

Gene VTA1P1, Length 866 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1P1-201ENST00000414044 APEX2Q9UBZ4 518 aa6.61□□□□□ -1.35
VTA1P1-201ENST00000414044 ATP8A1Q9Y2Q0 1164 aa6.61□□□□□ -1.35
VTA1P1-201ENST00000414044 TRBV23-1A0A0A0MS06 115 aa6.6□□□□□ -1.35
VTA1P1-201ENST00000414044 PDE8AO60658 829 aa6.6□□□□□ -1.35
VTA1P1-201ENST00000414044 RAPGEF3O95398 923 aa6.6□□□□□ -1.35
VTA1P1-201ENST00000414044 ITGAVP06756 1048 aa6.6□□□□□ -1.35
VTA1P1-201ENST00000414044 CLCN7P51798 805 aa6.6□□□□□ -1.35
VTA1P1-201ENST00000414044 CCDC181Q5TID7 509 aa6.6□□□□□ -1.35
VTA1P1-201ENST00000414044 YOD1Q5VVQ6 348 aaPredicted RBP6.6□□□□□ -1.35
VTA1P1-201ENST00000414044 DCAF15Q66K64 600 aa6.6□□□□□ -1.35
VTA1P1-201ENST00000414044 ARMCX6Q7L4S7 300 aa6.6□□□□□ -1.35
VTA1P1-201ENST00000414044 ATG4DQ86TL0 474 aaPredicted RBP6.6□□□□□ -1.35
VTA1P1-201ENST00000414044 FERMT3Q86UX7 667 aa6.6□□□□□ -1.35
VTA1P1-201ENST00000414044 JAMLQ86YT9 394 aa6.6□□□□□ -1.35
VTA1P1-201ENST00000414044 WFDC3Q8IUB2 231 aa6.6□□□□□ -1.35
VTA1P1-201ENST00000414044 CCDC144CPQ8IYA2 1237 aa6.6□□□□□ -1.35
VTA1P1-201ENST00000414044 PRPF38AQ8NAV1 312 aaKnown RBP6.6□□□□□ -1.35
VTA1P1-201ENST00000414044 MRPL4Q9BYD3 311 aaKnown RBP6.6□□□□□ -1.35
VTA1P1-201ENST00000414044 GBP3Q9H0R5 595 aa6.6□□□□□ -1.35
VTA1P1-201ENST00000414044 HOMER2Q9NSB8 354 aa6.6□□□□□ -1.35
VTA1P1-201ENST00000414044 KRTAP4-8A0A0G2JLE6 195 aa6.59□□□□□ -1.35
VTA1P1-201ENST00000414044 FGFR1P11362 822 aa6.59□□□□□ -1.35
VTA1P1-201ENST00000414044 POU3F3P20264 500 aaPredicted RBP6.59□□□□□ -1.35
VTA1P1-201ENST00000414044 CDKN1CP49918 316 aaPredicted RBP6.59□□□□□ -1.35
VTA1P1-201ENST00000414044 SUMO1P63165 101 aaKnown RBP6.59□□□□□ -1.35
VTA1P1-201ENST00000414044 CT47A1Q5JQC4 288 aaPredicted RBP6.59□□□□□ -1.35
VTA1P1-201ENST00000414044 SCUBE1Q8IWY4 988 aa6.59□□□□□ -1.35
VTA1P1-201ENST00000414044 POU5F2Q8N7G0 328 aa6.59□□□□□ -1.35
VTA1P1-201ENST00000414044 ZNF513Q8N8E2 541 aaPredicted RBP6.59□□□□□ -1.35
VTA1P1-201ENST00000414044 LRRN4CLQ8ND94 238 aa6.59□□□□□ -1.35
VTA1P1-201ENST00000414044 ZNF512BQ96KM6 892 aaPredicted RBP6.59□□□□□ -1.35
VTA1P1-201ENST00000414044 FGD4Q96M96 766 aa6.59□□□□□ -1.35
VTA1P1-201ENST00000414044 FAM126AQ9BYI3 521 aaPredicted RBP6.59□□□□□ -1.35
VTA1P1-201ENST00000414044 FOXQ1Q9C009 403 aa6.59□□□□□ -1.35
VTA1P1-201ENST00000414044 MKRN2Q9H000 416 aaKnown RBP6.59□□□□□ -1.35
VTA1P1-201ENST00000414044 ARID1BQ8NFD5 2236 aaPredicted RBP6.59□□□□□ -1.35
VTA1P1-201ENST00000414044 GSG1L2A8MUP6 293 aa6.58□□□□□ -1.36
VTA1P1-201ENST00000414044 PAPLNO95428 1278 aa6.58□□□□□ -1.36
VTA1P1-201ENST00000414044 IKZF1Q13422 519 aa6.58□□□□□ -1.36
VTA1P1-201ENST00000414044 OGFOD2Q6N063 350 aa6.58□□□□□ -1.36
VTA1P1-201ENST00000414044 SLC23A3Q6PIS1 610 aa6.58□□□□□ -1.36
VTA1P1-201ENST00000414044 RNF180Q86T96 592 aa6.58□□□□□ -1.36
VTA1P1-201ENST00000414044 MFSD2AQ8NA29 543 aa6.58□□□□□ -1.36
VTA1P1-201ENST00000414044 HEXIM2Q96MH2 286 aaKnown RBP6.58□□□□□ -1.36
VTA1P1-201ENST00000414044 CEP89Q96ST8 783 aa6.58□□□□□ -1.36
VTA1P1-201ENST00000414044 WHRNQ9P202 907 aa6.58□□□□□ -1.36
VTA1P1-201ENST00000414044 CHPF2Q9P2E5 772 aa6.58□□□□□ -1.36
VTA1P1-201ENST00000414044 MCM8Q9UJA3 840 aa6.58□□□□□ -1.36
VTA1P1-201ENST00000414044 TPX2Q9ULW0 747 aaKnown RBP6.58□□□□□ -1.36
VTA1P1-201ENST00000414044 G3BP2Q9UN86 482 aaKnown RBP6.58□□□□□ -1.36
VTA1P1-201ENST00000414044 MAPRE3Q9UPY8 281 aa6.58□□□□□ -1.36
VTA1P1-201ENST00000414044 SUGT1Q9Y2Z0 365 aa6.58□□□□□ -1.36
VTA1P1-201ENST00000414044 DNAJC25-GNG10A0A024R161 153 aa6.57□□□□□ -1.36
VTA1P1-201ENST00000414044 PPM1BO75688 479 aa6.57□□□□□ -1.36
VTA1P1-201ENST00000414044 RNF4P78317 190 aa6.57□□□□□ -1.36
VTA1P1-201ENST00000414044 ANKRD39Q53RE8 183 aa6.57□□□□□ -1.36
VTA1P1-201ENST00000414044 HSP90AB2PQ58FF8 381 aa6.57□□□□□ -1.36
VTA1P1-201ENST00000414044 ODR4Q5SWX8 454 aa6.57□□□□□ -1.36
VTA1P1-201ENST00000414044 NBPF12Q5TAG4 269 aaPredicted RBP6.57□□□□□ -1.36
VTA1P1-201ENST00000414044 ADAT2Q7Z6V5 191 aaKnown RBP6.57□□□□□ -1.36
VTA1P1-201ENST00000414044 DDX42Q86XP3 938 aaKnown RBP eCLIP6.57□□□□□ -1.36
VTA1P1-201ENST00000414044 BVESQ8NE79 360 aa6.57□□□□□ -1.36
VTA1P1-201ENST00000414044 XAGE3Q8WTP9 111 aa6.57□□□□□ -1.36
VTA1P1-201ENST00000414044 PPP1R13LQ8WUF5 828 aa6.57□□□□□ -1.36
VTA1P1-201ENST00000414044 JDP2Q8WYK2 163 aa6.57□□□□□ -1.36
VTA1P1-201ENST00000414044 COX4I2Q96KJ9 171 aa6.57□□□□□ -1.36
VTA1P1-201ENST00000414044 CLUHP3Q96NS8 147 aa6.57□□□□□ -1.36
VTA1P1-201ENST00000414044 IER2Q9BTL4 223 aa6.57□□□□□ -1.36
VTA1P1-201ENST00000414044 LGR4Q9BXB1 951 aa6.57□□□□□ -1.36
VTA1P1-201ENST00000414044 INTS7Q9NVH2 962 aaKnown RBP6.57□□□□□ -1.36
VTA1P1-201ENST00000414044 MAGEC2Q9UBF1 373 aaPredicted RBP6.57□□□□□ -1.36
VTA1P1-201ENST00000414044 PLAGL2Q9UPG8 496 aa6.57□□□□□ -1.36
VTA1P1-201ENST00000414044 U3KQE9 123 aa6.57□□□□□ -1.36
VTA1P1-201ENST00000414044 FAM155AB1AL88 458 aaPredicted RBP6.56□□□□□ -1.36
VTA1P1-201ENST00000414044 PRODHO43272 600 aa6.56□□□□□ -1.36
VTA1P1-201ENST00000414044 TBX1O43435 398 aa6.56□□□□□ -1.36
VTA1P1-201ENST00000414044 CAPNS1P04632 268 aa6.56□□□□□ -1.36
VTA1P1-201ENST00000414044 RNASE1P07998 156 aaKnown RBP6.56□□□□□ -1.36
VTA1P1-201ENST00000414044 PABPC1P11940 636 aaKnown RBP6.56□□□□□ -1.36
VTA1P1-201ENST00000414044 CD247P20963 164 aa6.56□□□□□ -1.36
VTA1P1-201ENST00000414044 PMLP29590 882 aa6.56□□□□□ -1.36
VTA1P1-201ENST00000414044 GRIA2P42262 883 aa6.56□□□□□ -1.36
VTA1P1-201ENST00000414044 NFKB2Q00653 900 aa6.56□□□□□ -1.36
VTA1P1-201ENST00000414044 TRIM61Q5EBN2 209 aa6.56□□□□□ -1.36
VTA1P1-201ENST00000414044 NSMFQ6X4W1 530 aa6.56□□□□□ -1.36
VTA1P1-201ENST00000414044 LRRTM3Q86VH5 581 aa6.56□□□□□ -1.36
VTA1P1-201ENST00000414044 SPACA3Q8IXA5 215 aa6.56□□□□□ -1.36
VTA1P1-201ENST00000414044 C7orf61Q8IZ16 206 aa6.56□□□□□ -1.36
VTA1P1-201ENST00000414044 UBR7Q8N806 425 aa6.56□□□□□ -1.36
VTA1P1-201ENST00000414044 DNAJB8Q8NHS0 232 aa6.56□□□□□ -1.36
VTA1P1-201ENST00000414044 OSBP2Q969R2 916 aa6.56□□□□□ -1.36
VTA1P1-201ENST00000414044 TARS2Q9BW92 718 aaKnown RBP6.56□□□□□ -1.36
VTA1P1-201ENST00000414044 MBNL3Q9NUK0 354 aaKnown RBP6.56□□□□□ -1.36
VTA1P1-201ENST00000414044 SFMBT1Q9UHJ3 866 aa6.56□□□□□ -1.36
VTA1P1-201ENST00000414044 ZNF451Q9Y4E5 1061 aa6.56□□□□□ -1.36
VTA1P1-201ENST00000414044 ALG1L2C9J202 215 aa6.55□□□□□ -1.36
VTA1P1-201ENST00000414044 NOP56O00567 594 aaKnown RBP6.55□□□□□ -1.36
VTA1P1-201ENST00000414044 SHOXO15266 292 aa6.55□□□□□ -1.36
VTA1P1-201ENST00000414044 ITGA4P13612 1032 aa6.55□□□□□ -1.36
VTA1P1-201ENST00000414044 SDSP20132 328 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms