RNA–Protein interactions for RNA: ENST00000413985.1

CRIM1-202, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-202ENST00000413985 SRGAP3O43295 1099 aa13.3□□□□□ -0.28
CRIM1-202ENST00000413985 GFRA3O60609 400 aa13.3□□□□□ -0.28
CRIM1-202ENST00000413985 VCPKMTQ9H867 229 aa13.3□□□□□ -0.28
CRIM1-202ENST00000413985 SUGCTQ9HAC7 445 aa13.3□□□□□ -0.28
CRIM1-202ENST00000413985 TRMT13Q9NUP7 481 aaKnown RBP13.3□□□□□ -0.28
CRIM1-202ENST00000413985 WDR46O15213 610 aaKnown RBP13.29□□□□□ -0.28
CRIM1-202ENST00000413985 SLC4A3P48751 1232 aa13.29□□□□□ -0.28
CRIM1-202ENST00000413985 NKX3-2P78367 333 aa13.29□□□□□ -0.28
CRIM1-202ENST00000413985 ZP2Q05996 745 aa13.29□□□□□ -0.28
CRIM1-202ENST00000413985 TCF15Q12870 199 aa13.29□□□□□ -0.28
CRIM1-202ENST00000413985 TTC39AQ5SRH9 613 aa13.29□□□□□ -0.28
CRIM1-202ENST00000413985 ARMCX2Q7L311 632 aa13.29□□□□□ -0.28
CRIM1-202ENST00000413985 PPP1R13LQ8WUF5 828 aa13.29□□□□□ -0.28
CRIM1-202ENST00000413985 DDX11Q96FC9 970 aa13.29□□□□□ -0.28
CRIM1-202ENST00000413985 DBNDD2Q9BQY9 259 aa13.29□□□□□ -0.28
CRIM1-202ENST00000413985 PPP1R9AQ9ULJ8 1098 aa13.29□□□□□ -0.28
CRIM1-202ENST00000413985 TMX2Q9Y320 296 aa13.29□□□□□ -0.28
CRIM1-202ENST00000413985 DDX49Q9Y6V7 483 aaKnown RBP13.29□□□□□ -0.28
CRIM1-202ENST00000413985 TET1Q8NFU7 2136 aa13.28□□□□□ -0.28
CRIM1-202ENST00000413985 POLR3DP05423 398 aaPredicted RBP13.28□□□□□ -0.28
CRIM1-202ENST00000413985 PFKMP08237 780 aa13.28□□□□□ -0.28
CRIM1-202ENST00000413985 CYP2D6P10635 497 aa13.28□□□□□ -0.28
CRIM1-202ENST00000413985 AKR1B1P15121 316 aa13.28□□□□□ -0.28
CRIM1-202ENST00000413985 FOXK2Q01167 660 aa13.28□□□□□ -0.28
CRIM1-202ENST00000413985 ICA1Q05084 483 aa13.28□□□□□ -0.28
CRIM1-202ENST00000413985 TMEM63BQ5T3F8 832 aa13.28□□□□□ -0.28
CRIM1-202ENST00000413985 NOL8Q76FK4 1167 aaKnown RBP13.28□□□□□ -0.28
CRIM1-202ENST00000413985 TLK2Q86UE8 772 aa13.28□□□□□ -0.28
CRIM1-202ENST00000413985 MAGEB6Q8N7X4 407 aa13.28□□□□□ -0.28
CRIM1-202ENST00000413985 PHOSPHO2Q8TCD6 241 aa13.28□□□□□ -0.28
CRIM1-202ENST00000413985 MFSD14AQ96MC6 490 aa13.28□□□□□ -0.28
CRIM1-202ENST00000413985 ALDH8A1Q9H2A2 487 aaPredicted RBP13.28□□□□□ -0.28
CRIM1-202ENST00000413985 ABHD16BQ9H3Z7 469 aa13.28□□□□□ -0.28
CRIM1-202ENST00000413985 LMCD1Q9NZU5 365 aa13.28□□□□□ -0.28
CRIM1-202ENST00000413985 GNEQ9Y223 722 aaKnown RBP13.28□□□□□ -0.28
CRIM1-202ENST00000413985 C5orf42Q9H799 3197 aa13.27□□□□□ -0.28
CRIM1-202ENST00000413985 KIF28PB7ZC32 967 aa13.27□□□□□ -0.29
CRIM1-202ENST00000413985 IDH1O75874 414 aaKnown RBP13.27□□□□□ -0.29
CRIM1-202ENST00000413985 FSCN1Q16658 493 aaKnown RBP13.27□□□□□ -0.29
CRIM1-202ENST00000413985 FAM83BQ5T0W9 1011 aa13.27□□□□□ -0.29
CRIM1-202ENST00000413985 SNRNP48Q6IEG0 339 aaKnown RBP13.27□□□□□ -0.29
CRIM1-202ENST00000413985 TMEM179Q6ZVK1 233 aa13.27□□□□□ -0.29
CRIM1-202ENST00000413985 ZNF467Q7Z7K2 595 aaPredicted RBP13.27□□□□□ -0.29
CRIM1-202ENST00000413985 CCDC144CPQ8IYA2 1237 aa13.27□□□□□ -0.29
CRIM1-202ENST00000413985 DYNLL2Q96FJ2 89 aa13.27□□□□□ -0.29
CRIM1-202ENST00000413985 ARHGEF10LQ9HCE6 1279 aa13.27□□□□□ -0.29
CRIM1-202ENST00000413985 MUTYHQ9UIF7 546 aa13.27□□□□□ -0.29
CRIM1-202ENST00000413985 SIP14410 1827 aa13.27□□□□□ -0.29
CRIM1-202ENST00000413985 TANC1Q9C0D5 1861 aa13.27□□□□□ -0.29
CRIM1-202ENST00000413985 TECTAO75443 2155 aa13.27□□□□□ -0.29
CRIM1-202ENST00000413985 CABYRO75952 493 aa13.26□□□□□ -0.29
CRIM1-202ENST00000413985 ACTN1P12814 892 aa13.26□□□□□ -0.29
CRIM1-202ENST00000413985 IRS1P35568 1242 aa13.26□□□□□ -0.29
CRIM1-202ENST00000413985 PTPN5P54829 565 aa13.26□□□□□ -0.29
CRIM1-202ENST00000413985 TNFAIP2Q03169 654 aa13.26□□□□□ -0.29
CRIM1-202ENST00000413985 NEK9Q8TD19 979 aa13.26□□□□□ -0.29
CRIM1-202ENST00000413985 FTOQ9C0B1 505 aaKnown RBP eCLIP13.26□□□□□ -0.29
CRIM1-202ENST00000413985 MYH8P13535 1937 aa13.25□□□□□ -0.29
CRIM1-202ENST00000413985 DCHS1Q96JQ0 3298 aa13.25□□□□□ -0.29
CRIM1-202ENST00000413985 TNKSO95271 1327 aa13.25□□□□□ -0.29
CRIM1-202ENST00000413985 C19orf67A6NJJ6 358 aa13.25□□□□□ -0.29
CRIM1-202ENST00000413985 DYNC1LI2O43237 492 aaPredicted RBP13.25□□□□□ -0.29
CRIM1-202ENST00000413985 RAD21O60216 631 aa13.25□□□□□ -0.29
CRIM1-202ENST00000413985 SMPD1P17405 629 aa13.25□□□□□ -0.29
CRIM1-202ENST00000413985 COPB2P35606 906 aa13.25□□□□□ -0.29
CRIM1-202ENST00000413985 DEFB103AP81534 67 aa13.25□□□□□ -0.29
CRIM1-202ENST00000413985 NUP88Q99567 741 aaPredicted RBP13.25□□□□□ -0.29
CRIM1-202ENST00000413985 RIOK1Q9BRS2 568 aaKnown RBP13.25□□□□□ -0.29
CRIM1-202ENST00000413985 TEX13BQ9BXU2 312 aa13.25□□□□□ -0.29
CRIM1-202ENST00000413985 ANTXR1Q9H6X2 564 aa13.25□□□□□ -0.29
CRIM1-202ENST00000413985 ALG13Q9NP73 1137 aaKnown RBP13.25□□□□□ -0.29
CRIM1-202ENST00000413985 MCM9Q9NXL9 1143 aa13.25□□□□□ -0.29
CRIM1-202ENST00000413985 KMT2EQ8IZD2 1858 aa13.25□□□□□ -0.29
CRIM1-202ENST00000413985 ZDBF2Q9HCK1 2354 aa13.24□□□□□ -0.29
CRIM1-202ENST00000413985 IQCF3P0C7M6 154 aa13.24□□□□□ -0.29
CRIM1-202ENST00000413985 EEF2P13639 858 aaKnown RBP13.24□□□□□ -0.29
CRIM1-202ENST00000413985 CNTN2Q02246 1040 aa13.24□□□□□ -0.29
CRIM1-202ENST00000413985 CPXCR1Q8N123 301 aa13.24□□□□□ -0.29
CRIM1-202ENST00000413985 PDGFCQ9NRA1 345 aa13.24□□□□□ -0.29
CRIM1-202ENST00000413985 PLXNA3P51805 1871 aa13.23□□□□□ -0.29
CRIM1-202ENST00000413985 MYO15AQ9UKN7 3530 aa13.23□□□□□ -0.29
CRIM1-202ENST00000413985 PNMA6EA0A0J9YXQ4 647 aa13.23□□□□□ -0.29
CRIM1-202ENST00000413985 LINC01553A4QN01 128 aa13.23□□□□□ -0.29
CRIM1-202ENST00000413985 RGS20O76081 388 aa13.23□□□□□ -0.29
CRIM1-202ENST00000413985 ERVK-21P61565 698 aa13.23□□□□□ -0.29
CRIM1-202ENST00000413985 WDR5P61964 334 aaKnown RBP13.23□□□□□ -0.29
CRIM1-202ENST00000413985 MTX1Q13505 466 aa13.23□□□□□ -0.29
CRIM1-202ENST00000413985 TCTN1Q2MV58 587 aa13.23□□□□□ -0.29
CRIM1-202ENST00000413985 TNNI3KQ59H18 835 aa13.23□□□□□ -0.29
CRIM1-202ENST00000413985 CCDC158Q5M9N0 1113 aa13.23□□□□□ -0.29
CRIM1-202ENST00000413985 EP400NLQ6ZTU2 488 aa13.23□□□□□ -0.29
CRIM1-202ENST00000413985 ADHFE1Q8IWW8 467 aa13.23□□□□□ -0.29
CRIM1-202ENST00000413985 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.23□□□□□ -0.29
CRIM1-202ENST00000413985 SDR42E1Q8WUS8 393 aa13.23□□□□□ -0.29
CRIM1-202ENST00000413985 TLR7Q9NYK1 1049 aaKnown RBP13.23□□□□□ -0.29
CRIM1-202ENST00000413985 FPGT-TNNI3KV9GXZ4 949 aa13.23□□□□□ -0.29
CRIM1-202ENST00000413985 PUS10Q3MIT2 529 aaKnown RBP13.22□□□□□ -0.29
CRIM1-202ENST00000413985 ANKRD35Q8N283 1001 aa13.22□□□□□ -0.29
CRIM1-202ENST00000413985 TGS1Q96RS0 853 aaKnown RBP13.22□□□□□ -0.29
CRIM1-202ENST00000413985 C17orf80Q9BSJ5 609 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms