RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 CHST13Q8NET6 341 aa29■■■□□ 2.23
AC005540.1-201ENST00000413911 TOX2Q96NM4 488 aa29■■■□□ 2.23
AC005540.1-201ENST00000413911 FSD1Q9BTV5 496 aa29■■■□□ 2.23
AC005540.1-201ENST00000413911 NACAP1Q9BZK3 213 aa29■■■□□ 2.23
AC005540.1-201ENST00000413911 KATNBL1Q9H079 304 aa29■■■□□ 2.23
AC005540.1-201ENST00000413911 HOMER2Q9NSB8 354 aa29■■■□□ 2.23
AC005540.1-201ENST00000413911 TMEM39AQ9NV64 488 aa29■■■□□ 2.23
AC005540.1-201ENST00000413911 PRUNE2Q8WUY3 3088 aa29■■■□□ 2.23
AC005540.1-201ENST00000413911 VCANP13611 3396 aa28.99■■■□□ 2.23
AC005540.1-201ENST00000413911 ZNF536O15090 1300 aa28.99■■■□□ 2.23
AC005540.1-201ENST00000413911 RAG1P15918 1043 aa28.99■■■□□ 2.23
AC005540.1-201ENST00000413911 PDE4BQ07343 736 aa28.99■■■□□ 2.23
AC005540.1-201ENST00000413911 CCDC144BQ3MJ40 725 aa28.99■■■□□ 2.23
AC005540.1-201ENST00000413911 ARMCX2Q7L311 632 aa28.99■■■□□ 2.23
AC005540.1-201ENST00000413911 NAPBQ9H115 298 aa28.99■■■□□ 2.23
AC005540.1-201ENST00000413911 MOXD2PA6NHM9 499 aa28.98■■■□□ 2.23
AC005540.1-201ENST00000413911 ERC2O15083 957 aa28.98■■■□□ 2.23
AC005540.1-201ENST00000413911 LRRFIP1Q32MZ4 808 aaKnown RBP28.98■■■□□ 2.23
AC005540.1-201ENST00000413911 RASGRP2Q7LDG7 609 aa28.98■■■□□ 2.23
AC005540.1-201ENST00000413911 CCDC144CPQ8IYA2 1237 aa28.98■■■□□ 2.23
AC005540.1-201ENST00000413911 AGBL1Q96MI9 1066 aa28.98■■■□□ 2.23
AC005540.1-201ENST00000413911 ABHD16BQ9H3Z7 469 aa28.98■■■□□ 2.23
AC005540.1-201ENST00000413911 FBXO40Q9UH90 709 aa28.98■■■□□ 2.23
AC005540.1-201ENST00000413911 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.98■■■□□ 2.23
AC005540.1-201ENST00000413911 SALL3Q9BXA9 1300 aa28.97■■■□□ 2.23
AC005540.1-201ENST00000413911 CTAGE5O15320 804 aa28.97■■■□□ 2.23
AC005540.1-201ENST00000413911 CST5P28325 142 aaPredicted RBP28.97■■■□□ 2.23
AC005540.1-201ENST00000413911 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.97■■■□□ 2.23
AC005540.1-201ENST00000413911 NUP133Q8WUM0 1156 aa28.97■■■□□ 2.23
AC005540.1-201ENST00000413911 UPF3AQ9H1J1 476 aaKnown RBP28.97■■■□□ 2.23
AC005540.1-201ENST00000413911 IL17RBQ9NRM6 502 aa28.97■■■□□ 2.23
AC005540.1-201ENST00000413911 NMT2O60551 498 aa28.96■■■□□ 2.23
AC005540.1-201ENST00000413911 C6orf222P0C671 652 aaPredicted RBP28.96■■■□□ 2.23
AC005540.1-201ENST00000413911 MCCP23508 829 aa28.96■■■□□ 2.23
AC005540.1-201ENST00000413911 CDK7P50613 346 aa28.96■■■□□ 2.23
AC005540.1-201ENST00000413911 CTDSPL2Q05D32 466 aa28.96■■■□□ 2.23
AC005540.1-201ENST00000413911 FAM133AQ8N9E0 248 aa28.96■■■□□ 2.23
AC005540.1-201ENST00000413911 GMCL1Q96IK5 515 aa28.96■■■□□ 2.23
AC005540.1-201ENST00000413911 RNPC3Q96LT9 517 aaKnown RBP28.96■■■□□ 2.23
AC005540.1-201ENST00000413911 TBX21Q9UL17 535 aa28.96■■■□□ 2.23
AC005540.1-201ENST00000413911 DDX49Q9Y6V7 483 aaKnown RBP28.96■■■□□ 2.23
AC005540.1-201ENST00000413911 DCDC2CA8MYV0 355 aa28.95■■■□□ 2.22
AC005540.1-201ENST00000413911 ASGR1P07306 291 aa28.95■■■□□ 2.22
AC005540.1-201ENST00000413911 MX1P20591 662 aa28.95■■■□□ 2.22
AC005540.1-201ENST00000413911 STAT2P52630 851 aa28.95■■■□□ 2.22
AC005540.1-201ENST00000413911 GJA9P57773 515 aa28.95■■■□□ 2.22
AC005540.1-201ENST00000413911 SNAP25P60880 206 aa28.95■■■□□ 2.22
AC005540.1-201ENST00000413911 FPGSQ05932 587 aa28.95■■■□□ 2.22
AC005540.1-201ENST00000413911 STAG1Q8WVM7 1258 aa28.95■■■□□ 2.22
AC005540.1-201ENST00000413911 COL25A1Q9BXS0 654 aaPredicted RBP28.95■■■□□ 2.22
AC005540.1-201ENST00000413911 A1CFQ9NQ94 594 aaKnown RBP28.95■■■□□ 2.22
AC005540.1-201ENST00000413911 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.94■■■□□ 2.22
AC005540.1-201ENST00000413911 SOWAHBA6NEL2 793 aa28.94■■■□□ 2.22
AC005540.1-201ENST00000413911 SLC3A2P08195 630 aaKnown RBP28.94■■■□□ 2.22
AC005540.1-201ENST00000413911 VPS53Q5VIR6 699 aa28.94■■■□□ 2.22
AC005540.1-201ENST00000413911 KCTD1Q719H9 257 aa28.94■■■□□ 2.22
AC005540.1-201ENST00000413911 MYLIPQ8WY64 445 aa28.94■■■□□ 2.22
AC005540.1-201ENST00000413911 ACAD9Q9H845 621 aa28.94■■■□□ 2.22
AC005540.1-201ENST00000413911 RNF146Q9NTX7 359 aa28.94■■■□□ 2.22
AC005540.1-201ENST00000413911 ISY1Q9ULR0 285 aaKnown RBP28.94■■■□□ 2.22
AC005540.1-201ENST00000413911 ASTN1O14525 1302 aa28.94■■■□□ 2.22
AC005540.1-201ENST00000413911 ELP1O95163 1332 aa28.94■■■□□ 2.22
AC005540.1-201ENST00000413911 FDX1P10109 184 aa28.93■■■□□ 2.22
AC005540.1-201ENST00000413911 PTGS1P23219 599 aa28.93■■■□□ 2.22
AC005540.1-201ENST00000413911 SLC1A4P43007 532 aa28.93■■■□□ 2.22
AC005540.1-201ENST00000413911 GLT1D1Q96MS3 346 aa28.93■■■□□ 2.22
AC005540.1-201ENST00000413911 TIMP1P01033 207 aa28.92■■■□□ 2.22
AC005540.1-201ENST00000413911 GNASQ5JWF2 1037 aa28.92■■■□□ 2.22
AC005540.1-201ENST00000413911 FAM160B2Q86V87 743 aa28.92■■■□□ 2.22
AC005540.1-201ENST00000413911 CHURC1Q8WUH1 139 aa28.92■■■□□ 2.22
AC005540.1-201ENST00000413911 STX8Q9UNK0 236 aa28.92■■■□□ 2.22
AC005540.1-201ENST00000413911 SPTBN5Q9NRC6 3674 aaKnown RBP28.92■■■□□ 2.22
AC005540.1-201ENST00000413911 BEX3Q00994 111 aa28.91■■■□□ 2.22
AC005540.1-201ENST00000413911 C16orf59Q7L2K0 433 aa28.91■■■□□ 2.22
AC005540.1-201ENST00000413911 PCSK9Q8NBP7 692 aaKnown RBP28.91■■■□□ 2.22
AC005540.1-201ENST00000413911 TRERF1Q96PN7 1200 aa28.91■■■□□ 2.22
AC005540.1-201ENST00000413911 PLA2G6O60733 806 aa28.9■■■□□ 2.22
AC005540.1-201ENST00000413911 NKX3-2P78367 333 aa28.9■■■□□ 2.22
AC005540.1-201ENST00000413911 IKQ13123 557 aaPredicted RBP28.9■■■□□ 2.22
AC005540.1-201ENST00000413911 MUM1L1Q5H9M0 696 aa28.9■■■□□ 2.22
AC005540.1-201ENST00000413911 RCSD1Q6JBY9 416 aa28.9■■■□□ 2.22
AC005540.1-201ENST00000413911 CCDC174Q6PII3 467 aa28.9■■■□□ 2.22
AC005540.1-201ENST00000413911 PRR12Q9ULL5 1215 aa28.9■■■□□ 2.22
AC005540.1-201ENST00000413911 TSPY2A6NKD2 308 aa28.89■■■□□ 2.22
AC005540.1-201ENST00000413911 ARVCFO00192 962 aa28.89■■■□□ 2.22
AC005540.1-201ENST00000413911 ALAS1P13196 640 aa28.89■■■□□ 2.22
AC005540.1-201ENST00000413911 NOVP48745 357 aa28.89■■■□□ 2.22
AC005540.1-201ENST00000413911 MAFAQ8NHW3 353 aaPredicted RBP28.89■■■□□ 2.22
AC005540.1-201ENST00000413911 VTI1AQ96AJ9 217 aa28.89■■■□□ 2.22
AC005540.1-201ENST00000413911 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.89■■■□□ 2.22
AC005540.1-201ENST00000413911 SPC25Q9HBM1 224 aa28.89■■■□□ 2.22
AC005540.1-201ENST00000413911 TMEM63BQ5T3F8 832 aa28.88■■■□□ 2.21
AC005540.1-201ENST00000413911 MFSD5Q6N075 450 aa28.88■■■□□ 2.21
AC005540.1-201ENST00000413911 FAM126BQ8IXS8 530 aa28.88■■■□□ 2.21
AC005540.1-201ENST00000413911 PURBQ96QR8 312 aaKnown RBP28.88■■■□□ 2.21
AC005540.1-201ENST00000413911 ANAPC4Q9UJX5 808 aa28.88■■■□□ 2.21
AC005540.1-201ENST00000413911 MTMR7Q9Y216 660 aa28.88■■■□□ 2.21
AC005540.1-201ENST00000413911 GNEQ9Y223 722 aaKnown RBP28.88■■■□□ 2.21
AC005540.1-201ENST00000413911 LRRC37A2A6NM11 1700 aa28.87■■■□□ 2.21
AC005540.1-201ENST00000413911 A0A0U1RQG5 324 aaPredicted RBP28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms