RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 MSRAQ9UJ68 235 aa11.5□□□□□ -0.57
RFFL-203ENST00000413582 BRWD1Q9NSI6 2320 aa11.5□□□□□ -0.57
RFFL-203ENST00000413582 PIEZO1Q92508 2521 aa11.5□□□□□ -0.57
RFFL-203ENST00000413582 XIRP2A4UGR9 3374 aa11.49□□□□□ -0.57
RFFL-203ENST00000413582 ATP2A1O14983 1001 aa11.49□□□□□ -0.57
RFFL-203ENST00000413582 TLR3O15455 904 aaKnown RBP11.49□□□□□ -0.57
RFFL-203ENST00000413582 RAD21O60216 631 aa11.49□□□□□ -0.57
RFFL-203ENST00000413582 CYP2C18P33260 490 aa11.49□□□□□ -0.57
RFFL-203ENST00000413582 NKX3-2P78367 333 aa11.49□□□□□ -0.57
RFFL-203ENST00000413582 CCDC144BQ3MJ40 725 aa11.49□□□□□ -0.57
RFFL-203ENST00000413582 IL27Q8NEV9 243 aa11.49□□□□□ -0.57
RFFL-203ENST00000413582 RHPN1Q8TCX5 695 aa11.49□□□□□ -0.57
RFFL-203ENST00000413582 FAM122AQ96E09 287 aa11.49□□□□□ -0.57
RFFL-203ENST00000413582 DDX11Q96FC9 970 aa11.49□□□□□ -0.57
RFFL-203ENST00000413582 KATNBL1Q9H079 304 aa11.49□□□□□ -0.57
RFFL-203ENST00000413582 SPC25Q9HBM1 224 aa11.49□□□□□ -0.57
RFFL-203ENST00000413582 NDUFB10O96000 172 aa11.48□□□□□ -0.57
RFFL-203ENST00000413582 CHGBP05060 677 aa11.48□□□□□ -0.57
RFFL-203ENST00000413582 GNASQ5JWF2 1037 aa11.48□□□□□ -0.57
RFFL-203ENST00000413582 ARMCX2Q7L311 632 aa11.48□□□□□ -0.57
RFFL-203ENST00000413582 AMOTL1Q8IY63 956 aa11.48□□□□□ -0.57
RFFL-203ENST00000413582 SLC43A3Q8NBI5 491 aa11.48□□□□□ -0.57
RFFL-203ENST00000413582 VTI1AQ96AJ9 217 aa11.48□□□□□ -0.57
RFFL-203ENST00000413582 MTIF3Q9H2K0 278 aaKnown RBP11.48□□□□□ -0.57
RFFL-203ENST00000413582 ABHD16BQ9H3Z7 469 aa11.48□□□□□ -0.57
RFFL-203ENST00000413582 HIPK3Q9H422 1215 aa11.48□□□□□ -0.57
RFFL-203ENST00000413582 SLC28A3Q9HAS3 691 aa11.48□□□□□ -0.57
RFFL-203ENST00000413582 UMODL1Q5DID0 1318 aa11.48□□□□□ -0.57
RFFL-203ENST00000413582 ASTN1O14525 1302 aa11.47□□□□□ -0.57
RFFL-203ENST00000413582 BEX3Q00994 111 aa11.47□□□□□ -0.57
RFFL-203ENST00000413582 HSP90AB4PQ58FF6 505 aa11.47□□□□□ -0.57
RFFL-203ENST00000413582 CTR9Q6PD62 1173 aa11.47□□□□□ -0.57
RFFL-203ENST00000413582 OTOP2Q7RTS6 562 aa11.47□□□□□ -0.57
RFFL-203ENST00000413582 CPXCR1Q8N123 301 aa11.47□□□□□ -0.57
RFFL-203ENST00000413582 CLASRPQ8N2M8 674 aaKnown RBP11.47□□□□□ -0.57
RFFL-203ENST00000413582 WNT8AQ9H1J5 351 aa11.47□□□□□ -0.57
RFFL-203ENST00000413582 PAG1Q9NWQ8 432 aa11.47□□□□□ -0.57
RFFL-203ENST00000413582 MUC6Q6W4X9 2439 aa11.47□□□□□ -0.57
RFFL-203ENST00000413582 LCTP09848 1927 aa11.47□□□□□ -0.57
RFFL-203ENST00000413582 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.46□□□□□ -0.57
RFFL-203ENST00000413582 F5H6K3 240 aa11.46□□□□□ -0.57
RFFL-203ENST00000413582 FGBP02675 491 aa11.46□□□□□ -0.57
RFFL-203ENST00000413582 BMP1P13497 986 aa11.46□□□□□ -0.57
RFFL-203ENST00000413582 RASA1P20936 1047 aa11.46□□□□□ -0.57
RFFL-203ENST00000413582 RABGGTBP53611 331 aa11.46□□□□□ -0.57
RFFL-203ENST00000413582 TFF2Q03403 129 aa11.46□□□□□ -0.57
RFFL-203ENST00000413582 KLRC3Q07444 240 aa11.46□□□□□ -0.57
RFFL-203ENST00000413582 PPP2R2DQ66LE6 453 aa11.46□□□□□ -0.57
RFFL-203ENST00000413582 CXCL17Q6UXB2 119 aa11.46□□□□□ -0.57
RFFL-203ENST00000413582 CCDC144CPQ8IYA2 1237 aa11.46□□□□□ -0.57
RFFL-203ENST00000413582 PRPF38AQ8NAV1 312 aaKnown RBP11.46□□□□□ -0.57
RFFL-203ENST00000413582 VWCEQ96DN2 955 aa11.46□□□□□ -0.57
RFFL-203ENST00000413582 KIF1BPQ96EK5 621 aa11.46□□□□□ -0.57
RFFL-203ENST00000413582 DDRGK1Q96HY6 314 aa11.46□□□□□ -0.57
RFFL-203ENST00000413582 NOC4LQ9BVI4 516 aaKnown RBP11.46□□□□□ -0.57
RFFL-203ENST00000413582 C1QTNF1Q9BXJ1 281 aa11.46□□□□□ -0.57
RFFL-203ENST00000413582 SLC38A10Q9HBR0 1119 aa11.46□□□□□ -0.57
RFFL-203ENST00000413582 RAVER2Q9HCJ3 691 aaKnown RBP11.46□□□□□ -0.57
RFFL-203ENST00000413582 NYAP2Q9P242 653 aa11.46□□□□□ -0.57
RFFL-203ENST00000413582 ARPP21Q9UBL0 812 aaPredicted RBP11.46□□□□□ -0.57
RFFL-203ENST00000413582 FBXO40Q9UH90 709 aa11.46□□□□□ -0.57
RFFL-203ENST00000413582 SCN5AQ14524 2016 aa11.45□□□□□ -0.58
RFFL-203ENST00000413582 GRIN2DO15399 1336 aa11.45□□□□□ -0.58
RFFL-203ENST00000413582 IFIT2P09913 472 aaKnown RBP11.45□□□□□ -0.58
RFFL-203ENST00000413582 MYOGP15173 224 aa11.45□□□□□ -0.58
RFFL-203ENST00000413582 PTGS1P23219 599 aa11.45□□□□□ -0.58
RFFL-203ENST00000413582 SLC4A3P48751 1232 aa11.45□□□□□ -0.58
RFFL-203ENST00000413582 KCNQ1P51787 676 aa11.45□□□□□ -0.58
RFFL-203ENST00000413582 OAZ1P54368 228 aa11.45□□□□□ -0.58
RFFL-203ENST00000413582 CCL23P55773 120 aa11.45□□□□□ -0.58
RFFL-203ENST00000413582 UBE3CQ15386 1083 aa11.45□□□□□ -0.58
RFFL-203ENST00000413582 TLK2Q86UE8 772 aa11.45□□□□□ -0.58
RFFL-203ENST00000413582 ANKRD35Q8N283 1001 aa11.45□□□□□ -0.58
RFFL-203ENST00000413582 MICALL1Q8N3F8 863 aa11.45□□□□□ -0.58
RFFL-203ENST00000413582 CHST13Q8NET6 341 aa11.45□□□□□ -0.58
RFFL-203ENST00000413582 KIFC2Q96AC6 838 aa11.45□□□□□ -0.58
RFFL-203ENST00000413582 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.45□□□□□ -0.58
RFFL-203ENST00000413582 TSPYL2Q9H2G4 693 aaPredicted RBP11.45□□□□□ -0.58
RFFL-203ENST00000413582 BOLA2Q9H3K6 86 aa11.45□□□□□ -0.58
RFFL-203ENST00000413582 GNEQ9Y223 722 aaKnown RBP11.45□□□□□ -0.58
RFFL-203ENST00000413582 PCDHA11Q9Y5I1 949 aa11.45□□□□□ -0.58
RFFL-203ENST00000413582 SLC4A4Q9Y6R1 1079 aa11.45□□□□□ -0.58
RFFL-203ENST00000413582 TANC1Q9C0D5 1861 aa11.44□□□□□ -0.58
RFFL-203ENST00000413582 IGKV6D-41A0A0C4DH26 115 aa11.44□□□□□ -0.58
RFFL-203ENST00000413582 B4GALT4O60513 344 aa11.44□□□□□ -0.58
RFFL-203ENST00000413582 ZBED4O75132 1171 aa11.44□□□□□ -0.58
RFFL-203ENST00000413582 CABYRO75952 493 aa11.44□□□□□ -0.58
RFFL-203ENST00000413582 ATP5JP18859 108 aa11.44□□□□□ -0.58
RFFL-203ENST00000413582 CNTN2Q02246 1040 aa11.44□□□□□ -0.58
RFFL-203ENST00000413582 TNFAIP2Q03169 654 aa11.44□□□□□ -0.58
RFFL-203ENST00000413582 ITGA7Q13683 1181 aa11.44□□□□□ -0.58
RFFL-203ENST00000413582 FAM133AQ8N9E0 248 aa11.44□□□□□ -0.58
RFFL-203ENST00000413582 HAUS7Q99871 368 aa11.44□□□□□ -0.58
RFFL-203ENST00000413582 PUS7LQ9H0K6 701 aaKnown RBP11.44□□□□□ -0.58
RFFL-203ENST00000413582 HOMER2Q9NSB8 354 aa11.44□□□□□ -0.58
RFFL-203ENST00000413582 SLC4A7Q9Y6M7 1214 aa11.44□□□□□ -0.58
RFFL-203ENST00000413582 COL4A4P53420 1690 aaPredicted RBP11.43□□□□□ -0.58
RFFL-203ENST00000413582 SCN10AQ9Y5Y9 1956 aa11.43□□□□□ -0.58
RFFL-203ENST00000413582 ERC2O15083 957 aa11.43□□□□□ -0.58
RFFL-203ENST00000413582 ATP2A2P16615 1042 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms