RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 FAM205CA6NFA0 338 aa7.63□□□□□ -1.19
VPS41-204ENST00000413141 TRIM75PA6NK02 468 aa7.63□□□□□ -1.19
VPS41-204ENST00000413141 SPDYE4A6NLX3 237 aa7.63□□□□□ -1.19
VPS41-204ENST00000413141 TRAK2O60296 914 aa7.63□□□□□ -1.19
VPS41-204ENST00000413141 GADD45BO75293 160 aaPredicted RBP7.63□□□□□ -1.19
VPS41-204ENST00000413141 YEATS4O95619 227 aa7.63□□□□□ -1.19
VPS41-204ENST00000413141 GNA11P29992 359 aa7.63□□□□□ -1.19
VPS41-204ENST00000413141 ADCY7P51828 1080 aa7.63□□□□□ -1.19
VPS41-204ENST00000413141 UBE2HP62256 183 aa7.63□□□□□ -1.19
VPS41-204ENST00000413141 MAP3K9P80192 1104 aa7.63□□□□□ -1.19
VPS41-204ENST00000413141 CEBPZQ03701 1054 aaKnown RBP7.63□□□□□ -1.19
VPS41-204ENST00000413141 SPP2Q13103 211 aa7.63□□□□□ -1.19
VPS41-204ENST00000413141 KLHL40Q2TBA0 621 aa7.63□□□□□ -1.19
VPS41-204ENST00000413141 NOM1Q5C9Z4 860 aaKnown RBP7.63□□□□□ -1.19
VPS41-204ENST00000413141 RILPL1Q5EBL4 403 aa7.63□□□□□ -1.19
VPS41-204ENST00000413141 MAP1SQ66K74 1059 aaPredicted RBP7.63□□□□□ -1.19
VPS41-204ENST00000413141 LDHDQ86WU2 507 aa7.63□□□□□ -1.19
VPS41-204ENST00000413141 ANKRD13AQ8IZ07 590 aa7.63□□□□□ -1.19
VPS41-204ENST00000413141 GPT2Q8TD30 523 aa7.63□□□□□ -1.19
VPS41-204ENST00000413141 COA7Q96BR5 231 aa7.63□□□□□ -1.19
VPS41-204ENST00000413141 ANP32EQ9BTT0 268 aa7.63□□□□□ -1.19
VPS41-204ENST00000413141 RANBP17Q9H2T7 1088 aaKnown RBP7.63□□□□□ -1.19
VPS41-204ENST00000413141 RRAGCQ9HB90 399 aa7.63□□□□□ -1.19
VPS41-204ENST00000413141 C6orf50Q9HD87 102 aa7.63□□□□□ -1.19
VPS41-204ENST00000413141 EMILIN3Q9NT22 766 aa7.63□□□□□ -1.19
VPS41-204ENST00000413141 FEM1BQ9UK73 627 aa7.63□□□□□ -1.19
VPS41-204ENST00000413141 CLEC11AQ9Y240 323 aa7.63□□□□□ -1.19
VPS41-204ENST00000413141 CSADQ9Y600 493 aa7.63□□□□□ -1.19
VPS41-204ENST00000413141 CLIC4Q9Y696 253 aa7.63□□□□□ -1.19
VPS41-204ENST00000413141 ZHX2Q9Y6X8 837 aa7.63□□□□□ -1.19
VPS41-204ENST00000413141 RBBP6Q7Z6E9 1792 aaKnown RBP7.63□□□□□ -1.19
VPS41-204ENST00000413141 A0A0G2JMZ2 1700 aa7.63□□□□□ -1.19
VPS41-204ENST00000413141 SMCO2A6NFE2 343 aa7.62□□□□□ -1.19
VPS41-204ENST00000413141 SPDYE5A6NIY4 337 aa7.62□□□□□ -1.19
VPS41-204ENST00000413141 C19orf81C9J6K1 198 aa7.62□□□□□ -1.19
VPS41-204ENST00000413141 TRAF5O00463 557 aa7.62□□□□□ -1.19
VPS41-204ENST00000413141 MBD3O95983 291 aa7.62□□□□□ -1.19
VPS41-204ENST00000413141 TOB1P50616 345 aaPredicted RBP7.62□□□□□ -1.19
VPS41-204ENST00000413141 HMGCS2P54868 508 aa7.62□□□□□ -1.19
VPS41-204ENST00000413141 SNAP25P60880 206 aa7.62□□□□□ -1.19
VPS41-204ENST00000413141 TTLL12Q14166 644 aaPredicted RBP7.62□□□□□ -1.19
VPS41-204ENST00000413141 SF3A1Q15459 793 aaKnown RBP7.62□□□□□ -1.19
VPS41-204ENST00000413141 SKOR2Q2VWA4 1001 aaPredicted RBP7.62□□□□□ -1.19
VPS41-204ENST00000413141 SH3D19Q5HYK7 790 aa7.62□□□□□ -1.19
VPS41-204ENST00000413141 ANO1Q5XXA6 986 aa7.62□□□□□ -1.19
VPS41-204ENST00000413141 PIK3AP1Q6ZUJ8 805 aa7.62□□□□□ -1.19
VPS41-204ENST00000413141 MOB2Q70IA6 237 aa7.62□□□□□ -1.19
VPS41-204ENST00000413141 FBXO11Q86XK2 927 aa7.62□□□□□ -1.19
VPS41-204ENST00000413141 REXO1Q8N1G1 1221 aaKnown RBP7.62□□□□□ -1.19
VPS41-204ENST00000413141 LINC00301Q8NCQ3 95 aa7.62□□□□□ -1.19
VPS41-204ENST00000413141 BICD2Q8TD16 824 aa7.62□□□□□ -1.19
VPS41-204ENST00000413141 RASGRP4Q8TDF6 673 aa7.62□□□□□ -1.19
VPS41-204ENST00000413141 KCNG4Q8TDN1 519 aa7.62□□□□□ -1.19
VPS41-204ENST00000413141 CHURC1Q8WUH1 139 aa7.62□□□□□ -1.19
VPS41-204ENST00000413141 KIFC2Q96AC6 838 aa7.62□□□□□ -1.19
VPS41-204ENST00000413141 CLMNQ96JQ2 1002 aa7.62□□□□□ -1.19
VPS41-204ENST00000413141 SLF1Q9BQI6 1058 aa7.62□□□□□ -1.19
VPS41-204ENST00000413141 AMNQ9BXJ7 453 aa7.62□□□□□ -1.19
VPS41-204ENST00000413141 TANGO6Q9C0B7 1094 aa7.62□□□□□ -1.19
VPS41-204ENST00000413141 RPAP3Q9H6T3 665 aaPredicted RBP7.62□□□□□ -1.19
VPS41-204ENST00000413141 ELP3Q9H9T3 547 aa7.62□□□□□ -1.19
VPS41-204ENST00000413141 NMRK2Q9NPI5 230 aa7.62□□□□□ -1.19
VPS41-204ENST00000413141 RIC8AQ9NPQ8 531 aa7.62□□□□□ -1.19
VPS41-204ENST00000413141 FBXO28Q9NVF7 368 aa7.62□□□□□ -1.19
VPS41-204ENST00000413141 RCOR1Q9UKL0 485 aa7.62□□□□□ -1.19
VPS41-204ENST00000413141 NOL7Q9UMY1 257 aaKnown RBP7.62□□□□□ -1.19
VPS41-204ENST00000413141 PCDHA6Q9UN73 950 aa7.62□□□□□ -1.19
VPS41-204ENST00000413141 AFG3L2Q9Y4W6 797 aa7.62□□□□□ -1.19
VPS41-204ENST00000413141 PCDHA8Q9Y5H6 950 aa7.62□□□□□ -1.19
VPS41-204ENST00000413141 DDX49Q9Y6V7 483 aaKnown RBP7.62□□□□□ -1.19
VPS41-204ENST00000413141 RLFQ13129 1914 aa7.62□□□□□ -1.19
VPS41-204ENST00000413141 CCDC194A0A1B0GVG4 234 aa7.61□□□□□ -1.19
VPS41-204ENST00000413141 WNT7AO00755 349 aa7.61□□□□□ -1.19
VPS41-204ENST00000413141 SPTLC2O15270 562 aa7.61□□□□□ -1.19
VPS41-204ENST00000413141 FLOT1O75955 427 aa7.61□□□□□ -1.19
VPS41-204ENST00000413141 TAL1P17542 331 aaPredicted RBP7.61□□□□□ -1.19
VPS41-204ENST00000413141 TRAPPC10P48553 1259 aa7.61□□□□□ -1.19
VPS41-204ENST00000413141 CLK2P49760 499 aaKnown RBP7.61□□□□□ -1.19
VPS41-204ENST00000413141 PPATQ06203 517 aa7.61□□□□□ -1.19
VPS41-204ENST00000413141 SLC39A14Q15043 492 aa7.61□□□□□ -1.19
VPS41-204ENST00000413141 STK38Q15208 465 aa7.61□□□□□ -1.19
VPS41-204ENST00000413141 PTPAQ15257 358 aa7.61□□□□□ -1.19
VPS41-204ENST00000413141 USH1GQ495M9 461 aa7.61□□□□□ -1.19
VPS41-204ENST00000413141 TTC38Q5R3I4 469 aa7.61□□□□□ -1.19
VPS41-204ENST00000413141 ARMC9Q7Z3E5 817 aa7.61□□□□□ -1.19
VPS41-204ENST00000413141 KRT25Q7Z3Z0 450 aa7.61□□□□□ -1.19
VPS41-204ENST00000413141 ERO1BQ86YB8 467 aa7.61□□□□□ -1.19
VPS41-204ENST00000413141 RBM46Q8TBY0 533 aaKnown RBP7.61□□□□□ -1.19
VPS41-204ENST00000413141 ZNF526Q8TF50 670 aaPredicted RBP7.61□□□□□ -1.19
VPS41-204ENST00000413141 CUL5Q93034 780 aa7.61□□□□□ -1.19
VPS41-204ENST00000413141 OTUD5Q96G74 571 aa7.61□□□□□ -1.19
VPS41-204ENST00000413141 PGBD1Q96JS3 809 aa7.61□□□□□ -1.19
VPS41-204ENST00000413141 GLT8D2Q9H1C3 349 aa7.61□□□□□ -1.19
VPS41-204ENST00000413141 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.61□□□□□ -1.19
VPS41-204ENST00000413141 TMOD4Q9NZQ9 345 aa7.61□□□□□ -1.19
VPS41-204ENST00000413141 PPP1R9AQ9ULJ8 1098 aa7.61□□□□□ -1.19
VPS41-204ENST00000413141 PCDHB6Q9Y5E3 794 aa7.61□□□□□ -1.19
VPS41-204ENST00000413141 PCDHA1Q9Y5I3 950 aa7.61□□□□□ -1.19
VPS41-204ENST00000413141 ZNF536O15090 1300 aa7.6□□□□□ -1.19
VPS41-204ENST00000413141 ABCB11O95342 1321 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms