RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 ZMAT2Q96NC0 199 aaKnown RBP5.8□□□□□ -1.48
HERC4-205ENST00000412272 PLEKHF1Q96S99 279 aa5.8□□□□□ -1.48
HERC4-205ENST00000412272 CGREF1Q99674 301 aa5.8□□□□□ -1.48
HERC4-205ENST00000412272 TRIM5Q9C035 493 aa5.8□□□□□ -1.48
HERC4-205ENST00000412272 SEMA4AQ9H3S1 761 aa5.8□□□□□ -1.48
HERC4-205ENST00000412272 ZNF180Q9UJW8 692 aa5.8□□□□□ -1.48
HERC4-205ENST00000412272 NOSIPQ9Y314 301 aaKnown RBP5.8□□□□□ -1.48
HERC4-205ENST00000412272 SALL3Q9BXA9 1300 aa5.8□□□□□ -1.48
HERC4-205ENST00000412272 A0A1B0GVL5 298 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 STX6O43752 255 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 KCNJ13O60928 360 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 SDSP20132 328 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 TUBP50607 506 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 MSLNQ13421 630 aaPredicted RBP5.79□□□□□ -1.48
HERC4-205ENST00000412272 SLC27A3Q5K4L6 730 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 Q6ZUG5 572 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 B4GALNT4Q76KP1 1039 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 TAOK1Q7L7X3 1001 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 RELL1Q8IUW5 271 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 BCAS4Q8TDM0 211 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 GOLGA1Q92805 767 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 NAP1L3Q99457 506 aaPredicted RBP5.79□□□□□ -1.48
HERC4-205ENST00000412272 TBK1Q9UHD2 729 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 SAMM50Q9Y512 469 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 ATP7BP35670 1465 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 ZBED4O75132 1171 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 KIAA0754O94854 1291 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 GNAI3P08754 354 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 CLTAP09496 248 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 CCNCP24863 283 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 STAT6P42226 847 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 USP46P62068 366 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 IFFO1Q0D2I5 559 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 ADAM9Q13443 819 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 ANO6Q4KMQ2 910 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 C10orf76Q5T2E6 689 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 CRELD2Q6UXH1 353 aaPredicted RBP5.79□□□□□ -1.48
HERC4-205ENST00000412272 NDUFAF2Q8N183 169 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 ARHGAP18Q8N392 663 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 SGCDQ92629 289 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 IFT43Q96FT9 208 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 TCF12Q99081 682 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 CCT7Q99832 543 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 ACAD8Q9UKU7 415 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 HEY1Q9Y5J3 304 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 LOC105371267A0A1B0GV96 52 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 LRRIQ3A6PVS8 624 aaPredicted RBP5.79□□□□□ -1.48
HERC4-205ENST00000412272 ARHGAP33O14559 1287 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 ACTN4O43707 911 aaKnown RBP5.79□□□□□ -1.48
HERC4-205ENST00000412272 ANP32DO95626 131 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 MAP7Q14244 749 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 SAFBQ15424 915 aaKnown RBP eCLIP5.79□□□□□ -1.48
HERC4-205ENST00000412272 TBC1D9BQ66K14 1250 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 LRRC43Q8N309 656 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 RBM46Q8TBY0 533 aaKnown RBP5.79□□□□□ -1.48
HERC4-205ENST00000412272 ACMSDQ8TDX5 336 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 ZNF653Q96CK0 615 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 ZNF512BQ96KM6 892 aaPredicted RBP5.79□□□□□ -1.48
HERC4-205ENST00000412272 GOLPH3LQ9H4A5 285 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 SUGCTQ9HAC7 445 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 DMAP1Q9NPF5 467 aaPredicted RBP5.79□□□□□ -1.48
HERC4-205ENST00000412272 SCINQ9Y6U3 715 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 AOX1Q06278 1338 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 PTPRTO14522 1441 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 NPHP4O75161 1426 aaPredicted RBP5.79□□□□□ -1.48
HERC4-205ENST00000412272 BTBD11A6QL63 1104 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 ABLIM1O14639 778 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 OPLAHO14841 1288 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 ATP6V1G2O95670 118 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 PDE6CP51160 858 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 WHAMMP3Q1A5X7 153 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 LURAP1LQ8IV03 231 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 FAM20CQ8IXL6 584 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 TRPC4APQ8TEL6 797 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 ZFPM2Q8WW38 1151 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 SYTL4Q96C24 671 aaPredicted RBP5.79□□□□□ -1.48
HERC4-205ENST00000412272 TBC1D31Q96DN5 1066 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 L3MBTL3Q96JM7 780 aaPredicted RBP5.79□□□□□ -1.48
HERC4-205ENST00000412272 SPATA17Q96L03 361 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 RNPC3Q96LT9 517 aaKnown RBP5.79□□□□□ -1.48
HERC4-205ENST00000412272 CEP63Q96MT8 703 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 OSBPL1AQ9BXW6 950 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 GPR108Q9NPR9 543 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 TYW1Q9NV66 732 aaKnown RBP5.79□□□□□ -1.48
HERC4-205ENST00000412272 SLAIN2Q9P270 581 aa5.79□□□□□ -1.48
HERC4-205ENST00000412272 CEMIPQ8WUJ3 1361 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 BUB1BO60566 1050 aaPredicted RBP5.78□□□□□ -1.48
HERC4-205ENST00000412272 LDHBP07195 334 aaKnown RBP5.78□□□□□ -1.48
HERC4-205ENST00000412272 VIMP08670 466 aaKnown RBP5.78□□□□□ -1.48
HERC4-205ENST00000412272 HDGFP51858 240 aaKnown RBP5.78□□□□□ -1.48
HERC4-205ENST00000412272 SGSM1Q2NKQ1 1148 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 KRT27Q7Z3Y8 459 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 PCGF5Q86SE9 256 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 ZNF554Q86TJ5 538 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 DRC7Q8IY82 874 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 RETREG2Q8NC44 543 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 GIPC2Q8TF65 315 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 NOD2Q9HC29 1040 aa5.78□□□□□ -1.48
HERC4-205ENST00000412272 KDM6AO15550 1401 aaPredicted RBP5.78□□□□□ -1.48
HERC4-205ENST00000412272 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms