RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 ATP2B2Q01814 1243 aa27.8■■■□□ 2.04
VRK2-202ENST00000412104 PPP4R3BQ5MIZ7 849 aa27.8■■■□□ 2.04
VRK2-202ENST00000412104 ARMCX5Q6P1M9 558 aa27.8■■■□□ 2.04
VRK2-202ENST00000412104 SH3BP5LQ7L8J4 393 aa27.8■■■□□ 2.04
VRK2-202ENST00000412104 COA7Q96BR5 231 aa27.8■■■□□ 2.04
VRK2-202ENST00000412104 BLZF1Q9H2G9 400 aa27.8■■■□□ 2.04
VRK2-202ENST00000412104 PI4KBQ9UBF8 816 aa27.8■■■□□ 2.04
VRK2-202ENST00000412104 BIN2Q9UBW5 565 aaPredicted RBP27.8■■■□□ 2.04
VRK2-202ENST00000412104 CCNT1O60563 726 aaKnown RBP27.79■■■□□ 2.04
VRK2-202ENST00000412104 NPM3O75607 178 aaKnown RBP27.79■■■□□ 2.04
VRK2-202ENST00000412104 CD44P16070 742 aaKnown RBP27.79■■■□□ 2.04
VRK2-202ENST00000412104 HSP90AA4PQ58FG1 418 aa27.79■■■□□ 2.04
VRK2-202ENST00000412104 JMJD4Q9H9V9 463 aa27.79■■■□□ 2.04
VRK2-202ENST00000412104 PSME4Q14997 1843 aa27.79■■■□□ 2.04
VRK2-202ENST00000412104 PP2D1A8MPX8 630 aa27.79■■■□□ 2.04
VRK2-202ENST00000412104 PPIP5K2O43314 1243 aa27.79■■■□□ 2.04
VRK2-202ENST00000412104 STAT6P42226 847 aa27.79■■■□□ 2.04
VRK2-202ENST00000412104 CUL4BQ13620 913 aa27.79■■■□□ 2.04
VRK2-202ENST00000412104 CCDC96Q2M329 555 aa27.79■■■□□ 2.04
VRK2-202ENST00000412104 GPATCH4Q5T3I0 446 aaKnown RBP27.79■■■□□ 2.04
VRK2-202ENST00000412104 JAKMIP3Q5VZ66 844 aa27.79■■■□□ 2.04
VRK2-202ENST00000412104 ZSCAN29Q8IWY8 852 aaPredicted RBP27.79■■■□□ 2.04
VRK2-202ENST00000412104 ADGRF4Q8IZF3 695 aa27.79■■■□□ 2.04
VRK2-202ENST00000412104 TBCKQ8TEA7 893 aa27.79■■■□□ 2.04
VRK2-202ENST00000412104 TMEM260Q9NX78 707 aa27.79■■■□□ 2.04
VRK2-202ENST00000412104 UQCRHLA0A096LP55 91 aa27.78■■■□□ 2.04
VRK2-202ENST00000412104 YDJCA8MPS7 323 aa27.78■■■□□ 2.04
VRK2-202ENST00000412104 C21orf2O43822 256 aa27.78■■■□□ 2.04
VRK2-202ENST00000412104 UQCRHP07919 91 aa27.78■■■□□ 2.04
VRK2-202ENST00000412104 OR52Z1P0C646 297 aa27.78■■■□□ 2.04
VRK2-202ENST00000412104 ADCY7P51828 1080 aa27.78■■■□□ 2.04
VRK2-202ENST00000412104 DHX8Q14562 1220 aaKnown RBP27.78■■■□□ 2.04
VRK2-202ENST00000412104 TTBK2Q6IQ55 1244 aa27.78■■■□□ 2.04
VRK2-202ENST00000412104 SYNRGQ9UMZ2 1314 aa27.78■■■□□ 2.04
VRK2-202ENST00000412104 PNMA6FA0A0J9YX94 578 aa27.77■■■□□ 2.04
VRK2-202ENST00000412104 SFPQP23246 707 aaKnown RBP eCLIP27.77■■■□□ 2.04
VRK2-202ENST00000412104 VSTM4Q8IW00 320 aa27.77■■■□□ 2.04
VRK2-202ENST00000412104 SMYD4Q8IYR2 804 aaPredicted RBP27.77■■■□□ 2.04
VRK2-202ENST00000412104 PRIMPOLQ96LW4 560 aa27.77■■■□□ 2.04
VRK2-202ENST00000412104 CCSER1Q9C0I3 900 aa27.77■■■□□ 2.04
VRK2-202ENST00000412104 INTS13Q9NVM9 706 aa27.77■■■□□ 2.04
VRK2-202ENST00000412104 TMEM232C9JQI7 657 aa27.77■■■□□ 2.04
VRK2-202ENST00000412104 CERKLQ49MI3 558 aaPredicted RBP27.77■■■□□ 2.04
VRK2-202ENST00000412104 PDGFDQ9GZP0 370 aaPredicted RBP27.77■■■□□ 2.04
VRK2-202ENST00000412104 PPP1R3GB7ZBB8 358 aa27.76■■■□□ 2.03
VRK2-202ENST00000412104 UBA7P41226 1012 aa27.76■■■□□ 2.03
VRK2-202ENST00000412104 SHROOM1Q2M3G4 852 aaPredicted RBP27.76■■■□□ 2.03
VRK2-202ENST00000412104 NAALADL2Q58DX5 795 aa27.76■■■□□ 2.03
VRK2-202ENST00000412104 KLHL10Q6JEL2 608 aa27.76■■■□□ 2.03
VRK2-202ENST00000412104 PPP1R18Q6NYC8 613 aa27.76■■■□□ 2.03
VRK2-202ENST00000412104 KCTD1Q719H9 257 aa27.76■■■□□ 2.03
VRK2-202ENST00000412104 TRIM34Q9BYJ4 488 aa27.76■■■□□ 2.03
VRK2-202ENST00000412104 SAMSN1Q9NSI8 373 aaKnown RBP27.76■■■□□ 2.03
VRK2-202ENST00000412104 CDK11BP21127 795 aaKnown RBP27.75■■■□□ 2.03
VRK2-202ENST00000412104 ORC2Q13416 577 aaPredicted RBP27.75■■■□□ 2.03
VRK2-202ENST00000412104 TATDN1Q6P1N9 297 aa27.75■■■□□ 2.03
VRK2-202ENST00000412104 RASSF8Q8NHQ8 419 aa27.75■■■□□ 2.03
VRK2-202ENST00000412104 TDRD3Q9H7E2 651 aaKnown RBP27.75■■■□□ 2.03
VRK2-202ENST00000412104 PPP1R11O60927 126 aaPredicted RBP27.75■■■□□ 2.03
VRK2-202ENST00000412104 RRAGBQ5VZM2 374 aa27.75■■■□□ 2.03
VRK2-202ENST00000412104 AK8Q96MA6 479 aa27.75■■■□□ 2.03
VRK2-202ENST00000412104 C16orf45Q96MC5 204 aaPredicted RBP27.75■■■□□ 2.03
VRK2-202ENST00000412104 EEF2P13639 858 aaKnown RBP27.74■■■□□ 2.03
VRK2-202ENST00000412104 SLC16A2P36021 539 aa27.74■■■□□ 2.03
VRK2-202ENST00000412104 SPATA1Q5VX52 437 aa27.74■■■□□ 2.03
VRK2-202ENST00000412104 KANSL2Q9H9L4 492 aa27.74■■■□□ 2.03
VRK2-202ENST00000412104 NYAP2Q9P242 653 aa27.74■■■□□ 2.03
VRK2-202ENST00000412104 STX17P56962 302 aa27.73■■■□□ 2.03
VRK2-202ENST00000412104 TPD52L1Q16890 204 aaPredicted RBP27.73■■■□□ 2.03
VRK2-202ENST00000412104 MKL1Q969V6 931 aa27.73■■■□□ 2.03
VRK2-202ENST00000412104 MTMR8Q96EF0 704 aa27.73■■■□□ 2.03
VRK2-202ENST00000412104 ATRNL1Q5VV63 1379 aa27.73■■■□□ 2.03
VRK2-202ENST00000412104 ARFGEF1Q9Y6D6 1849 aa27.73■■■□□ 2.03
VRK2-202ENST00000412104 USP17L10C9JJH3 530 aa27.73■■■□□ 2.03
VRK2-202ENST00000412104 RPN1P04843 607 aaKnown RBP27.73■■■□□ 2.03
VRK2-202ENST00000412104 RIC8AQ9NPQ8 531 aa27.73■■■□□ 2.03
VRK2-202ENST00000412104 RMND1Q9NWS8 449 aa27.73■■■□□ 2.03
VRK2-202ENST00000412104 USP27XA6NNY8 438 aa27.72■■■□□ 2.03
VRK2-202ENST00000412104 ZBTB5O15062 677 aa27.72■■■□□ 2.03
VRK2-202ENST00000412104 POTEDQ86YR6 584 aa27.72■■■□□ 2.03
VRK2-202ENST00000412104 ENTPD3O75355 529 aa27.71■■■□□ 2.03
VRK2-202ENST00000412104 PTPN21Q16825 1174 aa27.71■■■□□ 2.03
VRK2-202ENST00000412104 MYRIPQ8NFW9 859 aa27.71■■■□□ 2.03
VRK2-202ENST00000412104 PRMT6Q96LA8 375 aaPredicted RBP27.71■■■□□ 2.03
VRK2-202ENST00000412104 CTNND2Q9UQB3 1225 aa27.71■■■□□ 2.03
VRK2-202ENST00000412104 COL2A1P02458 1487 aaPredicted RBP27.71■■■□□ 2.03
VRK2-202ENST00000412104 SEPT2Q15019 361 aa27.71■■■□□ 2.03
VRK2-202ENST00000412104 CCDC93Q567U6 631 aa27.71■■■□□ 2.03
VRK2-202ENST00000412104 ZNF658Q5TYW1 1059 aaPredicted RBP27.71■■■□□ 2.03
VRK2-202ENST00000412104 CABP7Q86V35 215 aa27.71■■■□□ 2.03
VRK2-202ENST00000412104 TTLL6Q8N841 843 aa27.71■■■□□ 2.03
VRK2-202ENST00000412104 DCAF4Q8WV16 495 aa27.71■■■□□ 2.03
VRK2-202ENST00000412104 KCND1Q9NSA2 647 aa27.71■■■□□ 2.03
VRK2-202ENST00000412104 ICA1Q05084 483 aa27.7■■■□□ 2.02
VRK2-202ENST00000412104 GRIPAP1Q4V328 841 aa27.7■■■□□ 2.02
VRK2-202ENST00000412104 TMEM179Q6ZVK1 233 aa27.7■■■□□ 2.02
VRK2-202ENST00000412104 LRRC15Q8TF66 581 aa27.7■■■□□ 2.02
VRK2-202ENST00000412104 PLIN2Q99541 437 aa27.7■■■□□ 2.02
VRK2-202ENST00000412104 RAD21O60216 631 aa27.69■■■□□ 2.02
VRK2-202ENST00000412104 GDF11O95390 407 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms