RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 ZMYM6O95789 1325 aa26.38■■□□□ 1.81
MSH6-202ENST00000411819 LAMA3Q16787 3333 aa26.37■■□□□ 1.81
MSH6-202ENST00000411819 NUCB1Q02818 461 aa26.37■■□□□ 1.81
MSH6-202ENST00000411819 TRIM60Q495X7 471 aa26.37■■□□□ 1.81
MSH6-202ENST00000411819 RCSD1Q6JBY9 416 aa26.37■■□□□ 1.81
MSH6-202ENST00000411819 CCDC174Q6PII3 467 aa26.37■■□□□ 1.81
MSH6-202ENST00000411819 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.37■■□□□ 1.81
MSH6-202ENST00000411819 PLEKHM2Q8IWE5 1019 aa26.37■■□□□ 1.81
MSH6-202ENST00000411819 PRDM5Q9NQX1 630 aaPredicted RBP26.37■■□□□ 1.81
MSH6-202ENST00000411819 RNF146Q9NTX7 359 aa26.37■■□□□ 1.81
MSH6-202ENST00000411819 LTBP2Q14767 1821 aa26.37■■□□□ 1.81
MSH6-202ENST00000411819 MFAP1P55081 439 aaKnown RBP26.36■■□□□ 1.81
MSH6-202ENST00000411819 MAMDC4Q6UXC1 1216 aa26.36■■□□□ 1.81
MSH6-202ENST00000411819 ZNF467Q7Z7K2 595 aaPredicted RBP26.36■■□□□ 1.81
MSH6-202ENST00000411819 AGBL1Q96MI9 1066 aa26.36■■□□□ 1.81
MSH6-202ENST00000411819 FAM184BQ9ULE4 1060 aa26.36■■□□□ 1.81
MSH6-202ENST00000411819 SNAI1O95863 264 aaPredicted RBP26.35■■□□□ 1.81
MSH6-202ENST00000411819 FGRP09769 529 aa26.35■■□□□ 1.81
MSH6-202ENST00000411819 ALAS1P13196 640 aa26.35■■□□□ 1.81
MSH6-202ENST00000411819 SDSP20132 328 aa26.35■■□□□ 1.81
MSH6-202ENST00000411819 SNAP25P60880 206 aa26.35■■□□□ 1.81
MSH6-202ENST00000411819 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.35■■□□□ 1.81
MSH6-202ENST00000411819 PRR12Q9ULL5 1215 aa26.35■■□□□ 1.81
MSH6-202ENST00000411819 PHF24Q9UPV7 400 aa26.35■■□□□ 1.81
MSH6-202ENST00000411819 ZNF536O15090 1300 aa26.35■■□□□ 1.81
MSH6-202ENST00000411819 DNAH12Q6ZR08 3092 aa26.34■■□□□ 1.81
MSH6-202ENST00000411819 DCAF4Q8WV16 495 aa26.34■■□□□ 1.81
MSH6-202ENST00000411819 OSBPL3Q9H4L5 887 aa26.34■■□□□ 1.81
MSH6-202ENST00000411819 DIAPH3Q9NSV4 1193 aa26.34■■□□□ 1.81
MSH6-202ENST00000411819 SYNRGQ9UMZ2 1314 aa26.34■■□□□ 1.81
MSH6-202ENST00000411819 LAMA4Q16363 1823 aa26.33■■□□□ 1.81
MSH6-202ENST00000411819 POTEB2H3BUK9 544 aa26.33■■□□□ 1.81
MSH6-202ENST00000411819 PLA2G6O60733 806 aa26.33■■□□□ 1.81
MSH6-202ENST00000411819 CNTN2Q02246 1040 aa26.33■■□□□ 1.81
MSH6-202ENST00000411819 ACVR2BQ13705 512 aa26.33■■□□□ 1.81
MSH6-202ENST00000411819 SNX17Q15036 470 aa26.33■■□□□ 1.81
MSH6-202ENST00000411819 TKFCQ3LXA3 575 aa26.33■■□□□ 1.81
MSH6-202ENST00000411819 LRIT3Q3SXY7 679 aa26.33■■□□□ 1.81
MSH6-202ENST00000411819 ARMCX2Q7L311 632 aa26.33■■□□□ 1.81
MSH6-202ENST00000411819 FGD4Q96M96 766 aa26.33■■□□□ 1.81
MSH6-202ENST00000411819 TRERF1Q96PN7 1200 aa26.33■■□□□ 1.81
MSH6-202ENST00000411819 ADAMTS4O75173 837 aa26.32■■□□□ 1.8
MSH6-202ENST00000411819 TOP1P11387 765 aaKnown RBP26.32■■□□□ 1.8
MSH6-202ENST00000411819 NOVP48745 357 aa26.32■■□□□ 1.8
MSH6-202ENST00000411819 MFSD6Q6ZSS7 791 aa26.32■■□□□ 1.8
MSH6-202ENST00000411819 ABHD16BQ9H3Z7 469 aa26.32■■□□□ 1.8
MSH6-202ENST00000411819 A1CFQ9NQ94 594 aaKnown RBP26.32■■□□□ 1.8
MSH6-202ENST00000411819 A0A1W2PQ45 241 aaPredicted RBP26.31■■□□□ 1.8
MSH6-202ENST00000411819 A0A1W2PQY0 241 aa26.31■■□□□ 1.8
MSH6-202ENST00000411819 AKNAD1Q5T1N1 836 aa26.31■■□□□ 1.8
MSH6-202ENST00000411819 CWC27Q6UX04 472 aaKnown RBP26.31■■□□□ 1.8
MSH6-202ENST00000411819 TBC1D10CQ8IV04 446 aa26.31■■□□□ 1.8
MSH6-202ENST00000411819 CCDC144CPQ8IYA2 1237 aa26.31■■□□□ 1.8
MSH6-202ENST00000411819 TMEM47Q9BQJ4 181 aa26.31■■□□□ 1.8
MSH6-202ENST00000411819 CCPG1Q9ULG6 757 aa26.31■■□□□ 1.8
MSH6-202ENST00000411819 FRMPD2Q68DX3 1309 aaPredicted RBP26.31■■□□□ 1.8
MSH6-202ENST00000411819 SLC16A2P36021 539 aa26.3■■□□□ 1.8
MSH6-202ENST00000411819 RNF41Q9H4P4 317 aaPredicted RBP26.3■■□□□ 1.8
MSH6-202ENST00000411819 PDLIM7Q9NR12 457 aa26.3■■□□□ 1.8
MSH6-202ENST00000411819 TCP11L1Q9NUJ3 509 aa26.3■■□□□ 1.8
MSH6-202ENST00000411819 SUPT16HQ9Y5B9 1047 aaKnown RBP26.3■■□□□ 1.8
MSH6-202ENST00000411819 PCP11498 1178 aaKnown RBP26.29■■□□□ 1.8
MSH6-202ENST00000411819 CCDC144BQ3MJ40 725 aa26.29■■□□□ 1.8
MSH6-202ENST00000411819 C1orf53Q5VUE5 145 aa26.29■■□□□ 1.8
MSH6-202ENST00000411819 TTBK2Q6IQ55 1244 aa26.29■■□□□ 1.8
MSH6-202ENST00000411819 FAM133AQ8N9E0 248 aa26.29■■□□□ 1.8
MSH6-202ENST00000411819 GPCPD1Q9NPB8 672 aa26.29■■□□□ 1.8
MSH6-202ENST00000411819 LRRC37A2A6NM11 1700 aa26.28■■□□□ 1.8
MSH6-202ENST00000411819 HIP1O00291 1037 aa26.28■■□□□ 1.8
MSH6-202ENST00000411819 DUSP11O75319 330 aaKnown RBP26.28■■□□□ 1.8
MSH6-202ENST00000411819 C6orf222P0C671 652 aaPredicted RBP26.28■■□□□ 1.8
MSH6-202ENST00000411819 ACLYP53396 1101 aa26.28■■□□□ 1.8
MSH6-202ENST00000411819 TLE2Q04725 743 aa26.28■■□□□ 1.8
MSH6-202ENST00000411819 MUM1L1Q5H9M0 696 aa26.28■■□□□ 1.8
MSH6-202ENST00000411819 SYDE2Q5VT97 1194 aa26.28■■□□□ 1.8
MSH6-202ENST00000411819 NSMFQ6X4W1 530 aa26.28■■□□□ 1.8
MSH6-202ENST00000411819 TSEN34Q9BSV6 310 aaKnown RBP26.28■■□□□ 1.8
MSH6-202ENST00000411819 SPC25Q9HBM1 224 aa26.28■■□□□ 1.8
MSH6-202ENST00000411819 STARD7Q9NQZ5 370 aa26.28■■□□□ 1.8
MSH6-202ENST00000411819 NEDD4P46934 1319 aa26.28■■□□□ 1.8
MSH6-202ENST00000411819 MYADML2A6NDP7 307 aa26.27■■□□□ 1.8
MSH6-202ENST00000411819 ZNF213O14771 459 aa26.27■■□□□ 1.8
MSH6-202ENST00000411819 PQBP1O60828 265 aaKnown RBP26.27■■□□□ 1.8
MSH6-202ENST00000411819 ICAM1P05362 532 aa26.27■■□□□ 1.8
MSH6-202ENST00000411819 SH3RF1Q7Z6J0 888 aa26.27■■□□□ 1.8
MSH6-202ENST00000411819 NUP133Q8WUM0 1156 aa26.27■■□□□ 1.8
MSH6-202ENST00000411819 ESR2Q92731 530 aa26.27■■□□□ 1.8
MSH6-202ENST00000411819 RANBP17Q9H2T7 1088 aaKnown RBP26.27■■□□□ 1.8
MSH6-202ENST00000411819 LCTP09848 1927 aa26.26■■□□□ 1.79
MSH6-202ENST00000411819 SOWAHBA6NEL2 793 aa26.26■■□□□ 1.79
MSH6-202ENST00000411819 MOXD2PA6NHM9 499 aa26.26■■□□□ 1.79
MSH6-202ENST00000411819 ASB14A6NK59 587 aa26.26■■□□□ 1.79
MSH6-202ENST00000411819 ADCY6O43306 1168 aa26.26■■□□□ 1.79
MSH6-202ENST00000411819 PDHBP11177 359 aa26.26■■□□□ 1.79
MSH6-202ENST00000411819 KCNA10Q16322 511 aa26.26■■□□□ 1.79
MSH6-202ENST00000411819 KLHDC9Q8NEP7 349 aa26.26■■□□□ 1.79
MSH6-202ENST00000411819 BADQ92934 168 aa26.26■■□□□ 1.79
MSH6-202ENST00000411819 TRIM43BA6NCK2 446 aa26.25■■□□□ 1.79
MSH6-202ENST00000411819 CLTBP09497 229 aa26.25■■□□□ 1.79
MSH6-202ENST00000411819 IRX5P78411 483 aaPredicted RBP26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms