RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 EYSQ5T1H1 3165 aa19.91■□□□□ 0.78
MRPL55-220ENST00000411464 A0A0U1RQG5 324 aaPredicted RBP19.9■□□□□ 0.78
MRPL55-220ENST00000411464 TSPY3P0CV98 308 aa19.9■□□□□ 0.78
MRPL55-220ENST00000411464 TSPY8P0CW00 308 aa19.9■□□□□ 0.78
MRPL55-220ENST00000411464 BMP3P12645 472 aa19.9■□□□□ 0.78
MRPL55-220ENST00000411464 GJA9P57773 515 aa19.9■□□□□ 0.78
MRPL55-220ENST00000411464 PDE4BQ07343 736 aa19.9■□□□□ 0.78
MRPL55-220ENST00000411464 PPIGQ13427 754 aaKnown RBP eCLIP19.9■□□□□ 0.781e-6■■■■□ 24.6
MRPL55-220ENST00000411464 GRIN2CQ14957 1233 aa19.9■□□□□ 0.78
MRPL55-220ENST00000411464 TSHZ3Q63HK5 1081 aa19.9■□□□□ 0.78
MRPL55-220ENST00000411464 SLFN13Q68D06 897 aa19.9■□□□□ 0.78
MRPL55-220ENST00000411464 LRRC47Q8N1G4 583 aaKnown RBP19.9■□□□□ 0.78
MRPL55-220ENST00000411464 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.9■□□□□ 0.781e-7■■■■□ 24.9
MRPL55-220ENST00000411464 UPF3AQ9H1J1 476 aaKnown RBP19.9■□□□□ 0.78
MRPL55-220ENST00000411464 HOMER2Q9NSB8 354 aa19.9■□□□□ 0.78
MRPL55-220ENST00000411464 SMCHD1A6NHR9 2005 aa19.89■□□□□ 0.77
MRPL55-220ENST00000411464 M0R2C6 588 aa19.89■□□□□ 0.77
MRPL55-220ENST00000411464 ARVCFO00192 962 aa19.89■□□□□ 0.77
MRPL55-220ENST00000411464 SLC3A2P08195 630 aaKnown RBP19.89■□□□□ 0.77
MRPL55-220ENST00000411464 IRX5P78411 483 aaPredicted RBP19.89■□□□□ 0.77
MRPL55-220ENST00000411464 C20orf194Q5TEA3 1177 aa19.89■□□□□ 0.77
MRPL55-220ENST00000411464 NOL8Q76FK4 1167 aaKnown RBP19.89■□□□□ 0.77
MRPL55-220ENST00000411464 CCDC144CPQ8IYA2 1237 aa19.89■□□□□ 0.77
MRPL55-220ENST00000411464 IFNL3Q8IZI9 196 aa19.89■□□□□ 0.77
MRPL55-220ENST00000411464 TMEM199Q8N511 208 aa19.89■□□□□ 0.77
MRPL55-220ENST00000411464 NEDD1Q8NHV4 660 aa19.89■□□□□ 0.77
MRPL55-220ENST00000411464 SYMPKQ92797 1274 aaKnown RBP19.89■□□□□ 0.77
MRPL55-220ENST00000411464 TIFAQ96CG3 184 aa19.89■□□□□ 0.77
MRPL55-220ENST00000411464 ZNF576Q9H609 170 aa19.89■□□□□ 0.77
MRPL55-220ENST00000411464 DCTPP1Q9H773 170 aa19.89■□□□□ 0.77
MRPL55-220ENST00000411464 PRUNE2Q8WUY3 3088 aa19.88■□□□□ 0.77
MRPL55-220ENST00000411464 TMEM232C9JQI7 657 aa19.88■□□□□ 0.77
MRPL55-220ENST00000411464 TLR3O15455 904 aaKnown RBP19.88■□□□□ 0.77
MRPL55-220ENST00000411464 ADCY6O43306 1168 aa19.88■□□□□ 0.77
MRPL55-220ENST00000411464 IKQ13123 557 aaPredicted RBP19.88■□□□□ 0.77
MRPL55-220ENST00000411464 CHURC1Q8WUH1 139 aa19.88■□□□□ 0.77
MRPL55-220ENST00000411464 FGD4Q96M96 766 aa19.88■□□□□ 0.77
MRPL55-220ENST00000411464 ACAD9Q9H845 621 aa19.88■□□□□ 0.77
MRPL55-220ENST00000411464 MYH8P13535 1937 aa19.88■□□□□ 0.77
MRPL55-220ENST00000411464 STAT2P52630 851 aa19.87■□□□□ 0.77
MRPL55-220ENST00000411464 TFAP4Q01664 338 aa19.87■□□□□ 0.77
MRPL55-220ENST00000411464 CNTN2Q02246 1040 aa19.87■□□□□ 0.77
MRPL55-220ENST00000411464 CCDC129Q6ZRS4 1044 aa19.87■□□□□ 0.77
MRPL55-220ENST00000411464 FAM160B2Q86V87 743 aa19.87■□□□□ 0.77
MRPL55-220ENST00000411464 PARP14Q460N5 1801 aa19.87■□□□□ 0.77
MRPL55-220ENST00000411464 ZNFX1Q9P2E3 1918 aaKnown RBP19.86■□□□□ 0.77
MRPL55-220ENST00000411464 COL11A1P12107 1806 aaPredicted RBP19.86■□□□□ 0.77
MRPL55-220ENST00000411464 ASB14A6NK59 587 aa19.86■□□□□ 0.77
MRPL55-220ENST00000411464 CSF2RAP15509 400 aa19.86■□□□□ 0.77
MRPL55-220ENST00000411464 TNFAIP2Q03169 654 aa19.86■□□□□ 0.77
MRPL55-220ENST00000411464 TMEM240Q5SV17 173 aa19.86■□□□□ 0.77
MRPL55-220ENST00000411464 C16orf59Q7L2K0 433 aa19.86■□□□□ 0.77
MRPL55-220ENST00000411464 FAM126BQ8IXS8 530 aa19.86■□□□□ 0.77
MRPL55-220ENST00000411464 STAG1Q8WVM7 1258 aa19.86■□□□□ 0.77
MRPL55-220ENST00000411464 PPP1R12CQ9BZL4 782 aa19.86■□□□□ 0.77
MRPL55-220ENST00000411464 NAPBQ9H115 298 aa19.86■□□□□ 0.77
MRPL55-220ENST00000411464 MCCP23508 829 aa19.85■□□□□ 0.77
MRPL55-220ENST00000411464 SLC1A4P43007 532 aa19.85■□□□□ 0.77
MRPL55-220ENST00000411464 BEX3Q00994 111 aa19.85■□□□□ 0.77
MRPL55-220ENST00000411464 PPP4R3BQ5MIZ7 849 aa19.85■□□□□ 0.77
MRPL55-220ENST00000411464 FAM133AQ8N9E0 248 aa19.85■□□□□ 0.77
MRPL55-220ENST00000411464 CHMP4CQ96CF2 233 aa19.85■□□□□ 0.77
MRPL55-220ENST00000411464 GMCL1Q96IK5 515 aa19.85■□□□□ 0.77
MRPL55-220ENST00000411464 AGBL1Q96MI9 1066 aa19.85■□□□□ 0.77
MRPL55-220ENST00000411464 KATNBL1Q9H079 304 aa19.85■□□□□ 0.77
MRPL55-220ENST00000411464 A1CFQ9NQ94 594 aaKnown RBP19.85■□□□□ 0.77
MRPL55-220ENST00000411464 RNF146Q9NTX7 359 aa19.85■□□□□ 0.77
MRPL55-220ENST00000411464 ERC2O15083 957 aa19.84■□□□□ 0.77
MRPL55-220ENST00000411464 CABYRO75952 493 aa19.84■□□□□ 0.77
MRPL55-220ENST00000411464 ACRP10323 421 aa19.84■□□□□ 0.77
MRPL55-220ENST00000411464 NKX3-2P78367 333 aa19.84■□□□□ 0.77
MRPL55-220ENST00000411464 PPARAQ07869 468 aa19.84■□□□□ 0.77
MRPL55-220ENST00000411464 TKFCQ3LXA3 575 aa19.84■□□□□ 0.77
MRPL55-220ENST00000411464 PSRC1Q6PGN9 363 aaPredicted RBP19.84■□□□□ 0.77
MRPL55-220ENST00000411464 ZNF365Q70YC5 407 aa19.84■□□□□ 0.77
MRPL55-220ENST00000411464 TRERF1Q96PN7 1200 aa19.84■□□□□ 0.77
MRPL55-220ENST00000411464 SEC62Q99442 399 aaKnown RBP19.84■□□□□ 0.77
MRPL55-220ENST00000411464 GAS2L1Q99501 681 aaPredicted RBP19.84■□□□□ 0.77
MRPL55-220ENST00000411464 AP5M1Q9H0R1 490 aa19.84■□□□□ 0.77
MRPL55-220ENST00000411464 VCANP13611 3396 aa19.84■□□□□ 0.77
MRPL55-220ENST00000411464 PLIN4Q96Q06 1357 aa19.83■□□□□ 0.77
MRPL55-220ENST00000411464 TTC41PQ6P2S7 1318 aa19.83■□□□□ 0.77
MRPL55-220ENST00000411464 SOWAHBA6NEL2 793 aa19.83■□□□□ 0.77
MRPL55-220ENST00000411464 CTAGE5O15320 804 aa19.83■□□□□ 0.77
MRPL55-220ENST00000411464 ZEB2O60315 1214 aa19.83■□□□□ 0.77
MRPL55-220ENST00000411464 ALAS1P13196 640 aa19.83■□□□□ 0.77
MRPL55-220ENST00000411464 RASIP1Q5U651 963 aa19.83■□□□□ 0.77
MRPL55-220ENST00000411464 CXCL17Q6UXB2 119 aa19.83■□□□□ 0.77
MRPL55-220ENST00000411464 FSD1Q9BTV5 496 aa19.83■□□□□ 0.77
MRPL55-220ENST00000411464 PBX4Q9BYU1 374 aa19.83■□□□□ 0.77
MRPL55-220ENST00000411464 STX8Q9UNK0 236 aa19.83■□□□□ 0.77
MRPL55-220ENST00000411464 ZNF536O15090 1300 aa19.82■□□□□ 0.76
MRPL55-220ENST00000411464 PLXNA1Q9UIW2 1896 aa19.82■□□□□ 0.76
MRPL55-220ENST00000411464 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.82■□□□□ 0.76
MRPL55-220ENST00000411464 GRXCR1A8MXD5 290 aa19.82■□□□□ 0.76
MRPL55-220ENST00000411464 DYNC1LI2O43237 492 aaPredicted RBP19.82■□□□□ 0.76
MRPL55-220ENST00000411464 PLA2G6O60733 806 aa19.82■□□□□ 0.76
MRPL55-220ENST00000411464 CD4P01730 458 aa19.82■□□□□ 0.76
MRPL55-220ENST00000411464 CYP2C18P33260 490 aa19.82■□□□□ 0.76
MRPL55-220ENST00000411464 PBX2P40425 430 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms