RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 CORO1BQ9BR76 489 aa-0.09□□□□□ -2.42
RNU4-88P-201ENST00000411220 TRMOQ9BU70 441 aa-0.09□□□□□ -2.42
RNU4-88P-201ENST00000411220 GPRC5BQ9NZH0 403 aa-0.09□□□□□ -2.42
RNU4-88P-201ENST00000411220 TPX2Q9ULW0 747 aaKnown RBP-0.09□□□□□ -2.42
RNU4-88P-201ENST00000411220 HIVEP2P31629 2446 aa-0.09□□□□□ -2.42
RNU4-88P-201ENST00000411220 GRID2IPA4D2P6 1211 aa-0.1□□□□□ -2.43
RNU4-88P-201ENST00000411220 USP2O75604 605 aaPredicted RBP-0.1□□□□□ -2.43
RNU4-88P-201ENST00000411220 NEFMP07197 916 aa-0.1□□□□□ -2.43
RNU4-88P-201ENST00000411220 PDE3AQ14432 1141 aa-0.1□□□□□ -2.43
RNU4-88P-201ENST00000411220 XKR4Q5GH76 650 aa-0.1□□□□□ -2.43
RNU4-88P-201ENST00000411220 PKN3Q6P5Z2 889 aa-0.1□□□□□ -2.43
RNU4-88P-201ENST00000411220 CEP126Q9P2H0 1117 aa-0.1□□□□□ -2.43
RNU4-88P-201ENST00000411220 TMEFF2Q9UIK5 374 aaPredicted RBP-0.1□□□□□ -2.43
RNU4-88P-201ENST00000411220 TP73O15350 636 aa-0.11□□□□□ -2.43
RNU4-88P-201ENST00000411220 B4GALT4O60513 344 aa-0.11□□□□□ -2.43
RNU4-88P-201ENST00000411220 MICAL2O94851 1124 aa-0.11□□□□□ -2.43
RNU4-88P-201ENST00000411220 ECEL1O95672 775 aa-0.11□□□□□ -2.43
RNU4-88P-201ENST00000411220 CBX7O95931 251 aa-0.11□□□□□ -2.43
RNU4-88P-201ENST00000411220 SLFN14P0C7P3 912 aa-0.11□□□□□ -2.43
RNU4-88P-201ENST00000411220 LMNB1P20700 586 aa-0.11□□□□□ -2.43
RNU4-88P-201ENST00000411220 PTH2RP49190 550 aa-0.11□□□□□ -2.43
RNU4-88P-201ENST00000411220 ZNF134P52741 427 aa-0.11□□□□□ -2.43
RNU4-88P-201ENST00000411220 SMAD4Q13485 552 aaKnown RBP-0.11□□□□□ -2.43
RNU4-88P-201ENST00000411220 LAPTM5Q13571 262 aa-0.11□□□□□ -2.43
RNU4-88P-201ENST00000411220 NR1I3Q14994 352 aa-0.11□□□□□ -2.43
RNU4-88P-201ENST00000411220 CEP128Q6ZU80 1094 aa-0.11□□□□□ -2.43
RNU4-88P-201ENST00000411220 KBTBD2Q8IY47 623 aa-0.11□□□□□ -2.43
RNU4-88P-201ENST00000411220 DNASE2BQ8WZ79 361 aa-0.11□□□□□ -2.43
RNU4-88P-201ENST00000411220 NGLY1Q96IV0 654 aa-0.11□□□□□ -2.43
RNU4-88P-201ENST00000411220 G6PC3Q9BUM1 346 aa-0.11□□□□□ -2.43
RNU4-88P-201ENST00000411220 ANTXR1Q9H6X2 564 aa-0.11□□□□□ -2.43
RNU4-88P-201ENST00000411220 NRDE2Q9H7Z3 1164 aa-0.11□□□□□ -2.43
RNU4-88P-201ENST00000411220 TNFRSF12AQ9NP84 129 aa-0.11□□□□□ -2.43
RNU4-88P-201ENST00000411220 UTP3Q9NQZ2 479 aaKnown RBP eCLIP-0.11□□□□□ -2.43
RNU4-88P-201ENST00000411220 RBPJLQ9UBG7 517 aa-0.11□□□□□ -2.43
RNU4-88P-201ENST00000411220 KCNMB2Q9Y691 235 aa-0.11□□□□□ -2.43
RNU4-88P-201ENST00000411220 PYCARD-AS1I3L0S3 204 aa-0.12□□□□□ -2.43
RNU4-88P-201ENST00000411220 BRINP1O60477 761 aa-0.12□□□□□ -2.43
RNU4-88P-201ENST00000411220 CBLP22681 906 aa-0.12□□□□□ -2.43
RNU4-88P-201ENST00000411220 PTGS2P35354 604 aa-0.12□□□□□ -2.43
RNU4-88P-201ENST00000411220 ADCY1Q08828 1119 aa-0.12□□□□□ -2.43
RNU4-88P-201ENST00000411220 SH3D19Q5HYK7 790 aa-0.12□□□□□ -2.43
RNU4-88P-201ENST00000411220 RHBDF2Q6PJF5 856 aa-0.12□□□□□ -2.43
RNU4-88P-201ENST00000411220 MAMDC4Q6UXC1 1216 aa-0.12□□□□□ -2.43
RNU4-88P-201ENST00000411220 BNC2Q6ZN30 1099 aaPredicted RBP-0.12□□□□□ -2.43
RNU4-88P-201ENST00000411220 MRGPREQ86SM8 312 aa-0.12□□□□□ -2.43
RNU4-88P-201ENST00000411220 RGL4Q8IZJ4 473 aa-0.12□□□□□ -2.43
RNU4-88P-201ENST00000411220 SH2D3CQ8N5H7 860 aa-0.12□□□□□ -2.43
RNU4-88P-201ENST00000411220 TMEM102Q8N9M5 508 aaPredicted RBP-0.12□□□□□ -2.43
RNU4-88P-201ENST00000411220 MBD6Q96DN6 1003 aa-0.12□□□□□ -2.43
RNU4-88P-201ENST00000411220 MRPS18AQ9NVS2 196 aaKnown RBP-0.12□□□□□ -2.43
RNU4-88P-201ENST00000411220 PLA2G2DQ9UNK4 145 aa-0.12□□□□□ -2.43
RNU4-88P-201ENST00000411220 PCDHA11Q9Y5I1 949 aa-0.12□□□□□ -2.43
RNU4-88P-201ENST00000411220 RPS6KA4O75676 772 aa-0.13□□□□□ -2.43
RNU4-88P-201ENST00000411220 SERPINB2P05120 415 aa-0.13□□□□□ -2.43
RNU4-88P-201ENST00000411220 THBS2P35442 1172 aa-0.13□□□□□ -2.43
RNU4-88P-201ENST00000411220 KIR2DL1P43626 348 aaPredicted RBP-0.13□□□□□ -2.43
RNU4-88P-201ENST00000411220 KIR2DL2P43627 348 aaPredicted RBP-0.13□□□□□ -2.43
RNU4-88P-201ENST00000411220 MAPK8P45983 427 aa-0.13□□□□□ -2.43
RNU4-88P-201ENST00000411220 NR1H3Q13133 447 aa-0.13□□□□□ -2.43
RNU4-88P-201ENST00000411220 BMP8AQ7Z5Y6 402 aa-0.13□□□□□ -2.43
RNU4-88P-201ENST00000411220 ZNF329Q86UD4 541 aa-0.13□□□□□ -2.43
RNU4-88P-201ENST00000411220 GSPT2Q8IYD1 628 aaKnown RBP-0.13□□□□□ -2.43
RNU4-88P-201ENST00000411220 LINC00482Q8N8I6 264 aa-0.13□□□□□ -2.43
RNU4-88P-201ENST00000411220 SERBP1Q8NC51 408 aaKnown RBP eCLIP-0.13□□□□□ -2.43
RNU4-88P-201ENST00000411220 IGFBPL1Q8WX77 278 aa-0.13□□□□□ -2.43
RNU4-88P-201ENST00000411220 CCDC102AQ96A19 550 aa-0.13□□□□□ -2.43
RNU4-88P-201ENST00000411220 PLCD4Q9BRC7 762 aa-0.13□□□□□ -2.43
RNU4-88P-201ENST00000411220 TSPAN10Q9H1Z9 355 aaPredicted RBP-0.13□□□□□ -2.43
RNU4-88P-201ENST00000411220 TRIT1Q9H3H1 467 aaKnown RBP-0.13□□□□□ -2.43
RNU4-88P-201ENST00000411220 BCAS3Q9H6U6 928 aa-0.13□□□□□ -2.43
RNU4-88P-201ENST00000411220 SEC61A2Q9H9S3 476 aa-0.13□□□□□ -2.43
RNU4-88P-201ENST00000411220 DZANK1Q9NVP4 752 aa-0.13□□□□□ -2.43
RNU4-88P-201ENST00000411220 FOXJ2Q9P0K8 574 aa-0.13□□□□□ -2.43
RNU4-88P-201ENST00000411220 MINK1Q8N4C8 1332 aaPredicted RBP-0.13□□□□□ -2.43
RNU4-88P-201ENST00000411220 DDX3XO00571 662 aaKnown RBP eCLIP-0.14□□□□□ -2.43
RNU4-88P-201ENST00000411220 LINC01565O15544 149 aa-0.14□□□□□ -2.43
RNU4-88P-201ENST00000411220 PLGP00747 810 aaPredicted RBP-0.14□□□□□ -2.43
RNU4-88P-201ENST00000411220 CYP1A1P04798 512 aaPredicted RBP-0.14□□□□□ -2.43
RNU4-88P-201ENST00000411220 ASGR2P07307 311 aa-0.14□□□□□ -2.43
RNU4-88P-201ENST00000411220 KIR3DL1P43629 444 aa-0.14□□□□□ -2.43
RNU4-88P-201ENST00000411220 PCOLCEQ15113 449 aa-0.14□□□□□ -2.43
RNU4-88P-201ENST00000411220 LEXMQ3ZCV2 418 aa-0.14□□□□□ -2.43
RNU4-88P-201ENST00000411220 TTC39BQ5VTQ0 682 aaPredicted RBP-0.14□□□□□ -2.43
RNU4-88P-201ENST00000411220 RFX6Q8HWS3 928 aa-0.14□□□□□ -2.43
RNU4-88P-201ENST00000411220 DCP1BQ8IZD4 617 aaKnown RBP-0.14□□□□□ -2.43
RNU4-88P-201ENST00000411220 FUKQ8N0W3 1084 aa-0.14□□□□□ -2.43
RNU4-88P-201ENST00000411220 SMARCC2Q8TAQ2 1214 aa-0.14□□□□□ -2.43
RNU4-88P-201ENST00000411220 HAS1Q92839 578 aa-0.14□□□□□ -2.43
RNU4-88P-201ENST00000411220 LCE3DQ9BYE3 92 aa-0.14□□□□□ -2.43
RNU4-88P-201ENST00000411220 HMX1Q9NP08 348 aaPredicted RBP-0.14□□□□□ -2.43
RNU4-88P-201ENST00000411220 IGKV3D-20A0A0C4DH25 116 aa-0.15□□□□□ -2.43
RNU4-88P-201ENST00000411220 B3GALT2O43825 422 aa-0.15□□□□□ -2.43
RNU4-88P-201ENST00000411220 PPP1R15AO75807 674 aaPredicted RBP-0.15□□□□□ -2.43
RNU4-88P-201ENST00000411220 RHDQ02161 417 aa-0.15□□□□□ -2.43
RNU4-88P-201ENST00000411220 ERCC6LQ2NKX8 1250 aa-0.15□□□□□ -2.43
RNU4-88P-201ENST00000411220 ZIK1Q3SY52 487 aaPredicted RBP-0.15□□□□□ -2.43
RNU4-88P-201ENST00000411220 POLNQ7Z5Q5 900 aa-0.15□□□□□ -2.43
RNU4-88P-201ENST00000411220 TMPRSS6Q8IU80 811 aa-0.15□□□□□ -2.43
RNU4-88P-201ENST00000411220 TAB3Q8N5C8 712 aaPredicted RBP-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms