RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 MCM9Q9NXL9 1143 aa18.74■□□□□ 0.59
LIMS2-208ENST00000410011 BARHL2Q9NY43 387 aa18.74■□□□□ 0.59
LIMS2-208ENST00000410011 ERICH4A6NGS2 130 aa18.74■□□□□ 0.59
LIMS2-208ENST00000410011 EIF3JO75822 258 aaKnown RBP18.74■□□□□ 0.59
LIMS2-208ENST00000410011 ABL1P00519 1130 aa18.74■□□□□ 0.59
LIMS2-208ENST00000410011 KLRK1P26718 216 aa18.74■□□□□ 0.59
LIMS2-208ENST00000410011 UBA7P41226 1012 aa18.74■□□□□ 0.59
LIMS2-208ENST00000410011 TSR1Q2NL82 804 aaKnown RBP18.74■□□□□ 0.59
LIMS2-208ENST00000410011 CCDC88AQ3V6T2 1871 aa18.74■□□□□ 0.59
LIMS2-208ENST00000410011 COBLL1Q53SF7 1204 aa18.74■□□□□ 0.59
LIMS2-208ENST00000410011 TTI2Q6NXR4 508 aa18.74■□□□□ 0.59
LIMS2-208ENST00000410011 BARGINQ6ZT62 677 aa18.74■□□□□ 0.59
LIMS2-208ENST00000410011 TRAPPC11Q7Z392 1133 aa18.74■□□□□ 0.59
LIMS2-208ENST00000410011 NLRP3Q96P20 1036 aa18.74■□□□□ 0.59
LIMS2-208ENST00000410011 CHP1Q99653 195 aa18.74■□□□□ 0.59
LIMS2-208ENST00000410011 ZCCHC17Q9NP64 241 aaKnown RBP18.74■□□□□ 0.59
LIMS2-208ENST00000410011 IRS2Q9Y4H2 1338 aa18.74■□□□□ 0.59
LIMS2-208ENST00000410011 TAF1P21675 1872 aa18.73■□□□□ 0.59
LIMS2-208ENST00000410011 CNTNAP4Q9C0A0 1308 aa18.73■□□□□ 0.59
LIMS2-208ENST00000410011 COBLO75128 1261 aa18.73■□□□□ 0.59
LIMS2-208ENST00000410011 SRGNP10124 158 aa18.73■□□□□ 0.59
LIMS2-208ENST00000410011 KRT83P78385 493 aa18.73■□□□□ 0.59
LIMS2-208ENST00000410011 EHBP1Q8NDI1 1231 aa18.73■□□□□ 0.59
LIMS2-208ENST00000410011 TYW1BQ6NUM6 668 aa18.73■□□□□ 0.59
LIMS2-208ENST00000410011 IQCDQ96DY2 449 aa18.73■□□□□ 0.59
LIMS2-208ENST00000410011 RPGRIP1Q96KN7 1286 aa18.73■□□□□ 0.59
LIMS2-208ENST00000410011 TTYH3Q9C0H2 523 aa18.73■□□□□ 0.59
LIMS2-208ENST00000410011 ADAM21Q9UKJ8 722 aa18.73■□□□□ 0.59
LIMS2-208ENST00000410011 NRAPQ86VF7 1730 aa18.73■□□□□ 0.59
LIMS2-208ENST00000410011 PALM3A6NDB9 673 aaPredicted RBP18.72■□□□□ 0.59
LIMS2-208ENST00000410011 PMS1P54277 932 aaKnown RBP18.72■□□□□ 0.59
LIMS2-208ENST00000410011 CDK17Q00537 523 aa18.72■□□□□ 0.59
LIMS2-208ENST00000410011 PAPD7Q5XG87 772 aaKnown RBP18.72■□□□□ 0.59
LIMS2-208ENST00000410011 WDR59Q6PJI9 974 aa18.72■□□□□ 0.59
LIMS2-208ENST00000410011 CCDC170Q8IYT3 715 aa18.72■□□□□ 0.59
LIMS2-208ENST00000410011 STAG2Q8N3U4 1231 aa18.72■□□□□ 0.59
LIMS2-208ENST00000410011 TMEM60Q9H2L4 133 aa18.72■□□□□ 0.59
LIMS2-208ENST00000410011 ABCB6Q9NP58 842 aa18.72■□□□□ 0.59
LIMS2-208ENST00000410011 MAGEC2Q9UBF1 373 aaPredicted RBP18.72■□□□□ 0.59
LIMS2-208ENST00000410011 BAZ2BQ9UIF8 2168 aaKnown RBP18.72■□□□□ 0.59
LIMS2-208ENST00000410011 BICDL2A1A5D9 508 aa18.72■□□□□ 0.59
LIMS2-208ENST00000410011 HNRNPH2P55795 449 aaKnown RBP18.72■□□□□ 0.59
LIMS2-208ENST00000410011 PPP4CP60510 307 aa18.72■□□□□ 0.59
LIMS2-208ENST00000410011 ST5P78524 1137 aa18.72■□□□□ 0.59
LIMS2-208ENST00000410011 ORC2Q13416 577 aaPredicted RBP18.72■□□□□ 0.59
LIMS2-208ENST00000410011 FIGNQ5HY92 759 aa18.72■□□□□ 0.59
LIMS2-208ENST00000410011 GPKOWQ92917 476 aaPredicted RBP eCLIP18.72■□□□□ 0.59
LIMS2-208ENST00000410011 MAPK8IP1Q9UQF2 711 aa18.72■□□□□ 0.59
LIMS2-208ENST00000410011 TRIM49BA6NDI0 452 aa18.71■□□□□ 0.59
LIMS2-208ENST00000410011 H3BQF6 201 aa18.71■□□□□ 0.59
LIMS2-208ENST00000410011 STXBP3O00186 592 aa18.71■□□□□ 0.59
LIMS2-208ENST00000410011 USP17L8P0C7I0 530 aa18.71■□□□□ 0.59
LIMS2-208ENST00000410011 MCM3P25205 808 aa18.71■□□□□ 0.59
LIMS2-208ENST00000410011 TBC1D9BQ66K14 1250 aa18.71■□□□□ 0.59
LIMS2-208ENST00000410011 LINC00116Q8NCU8 138 aa18.71■□□□□ 0.59
LIMS2-208ENST00000410011 ZMYND12Q9H0C1 365 aa18.71■□□□□ 0.59
LIMS2-208ENST00000410011 SPATA31A5Q5VU36 1347 aa18.71■□□□□ 0.59
LIMS2-208ENST00000410011 SPATA31A7Q8IWB4 1347 aa18.71■□□□□ 0.59
LIMS2-208ENST00000410011 CCNE1P24864 410 aa18.71■□□□□ 0.58
LIMS2-208ENST00000410011 SMARCA1P28370 1054 aa18.71■□□□□ 0.58
LIMS2-208ENST00000410011 DZIP1Q86YF9 867 aaKnown RBP18.71■□□□□ 0.58
LIMS2-208ENST00000410011 FAM114A1Q8IWE2 563 aa18.71■□□□□ 0.58
LIMS2-208ENST00000410011 WDR66Q8TBY9 1149 aa18.71■□□□□ 0.58
LIMS2-208ENST00000410011 CCDC47Q96A33 483 aaKnown RBP18.71■□□□□ 0.58
LIMS2-208ENST00000410011 C7orf25Q9BPX7 421 aa18.71■□□□□ 0.58
LIMS2-208ENST00000410011 TFCP2L1Q9NZI6 479 aa18.71■□□□□ 0.58
LIMS2-208ENST00000410011 CYTH3O43739 400 aa18.7■□□□□ 0.58
LIMS2-208ENST00000410011 CERS3Q8IU89 383 aa18.7■□□□□ 0.58
LIMS2-208ENST00000410011 TRIM47Q96LD4 638 aa18.7■□□□□ 0.58
LIMS2-208ENST00000410011 DUSP9Q99956 384 aaKnown RBP18.7■□□□□ 0.58
LIMS2-208ENST00000410011 SPZ1Q9BXG8 430 aa18.7■□□□□ 0.58
LIMS2-208ENST00000410011 EXOC1Q9NV70 894 aa18.7■□□□□ 0.58
LIMS2-208ENST00000410011 FLT1P17948 1338 aa18.7■□□□□ 0.58
LIMS2-208ENST00000410011 A0A0G2JS52 829 aa18.69■□□□□ 0.58
LIMS2-208ENST00000410011 A0A1W2PQJ5 194 aa18.69■□□□□ 0.58
LIMS2-208ENST00000410011 HOXA7P31268 230 aaPredicted RBP18.69■□□□□ 0.58
LIMS2-208ENST00000410011 CYLC1P35663 651 aaPredicted RBP18.69■□□□□ 0.58
LIMS2-208ENST00000410011 VSNL1P62760 191 aa18.69■□□□□ 0.58
LIMS2-208ENST00000410011 INF2Q27J81 1249 aa18.69■□□□□ 0.58
LIMS2-208ENST00000410011 SLC35G1Q2M3R5 365 aa18.69■□□□□ 0.58
LIMS2-208ENST00000410011 RC3H1Q5TC82 1133 aaKnown RBP18.69■□□□□ 0.58
LIMS2-208ENST00000410011 KRT25Q7Z3Z0 450 aa18.69■□□□□ 0.58
LIMS2-208ENST00000410011 ZSCAN29Q8IWY8 852 aaPredicted RBP18.69■□□□□ 0.58
LIMS2-208ENST00000410011 AMOTL1Q8IY63 956 aa18.69■□□□□ 0.58
LIMS2-208ENST00000410011 RASGRP4Q8TDF6 673 aa18.69■□□□□ 0.58
LIMS2-208ENST00000410011 TUBGCP2Q9BSJ2 902 aa18.69■□□□□ 0.58
LIMS2-208ENST00000410011 VIPAS39Q9H9C1 493 aa18.69■□□□□ 0.58
LIMS2-208ENST00000410011 NARFQ9UHQ1 456 aa18.69■□□□□ 0.58
LIMS2-208ENST00000410011 GUCA1BQ9UMX6 200 aa18.69■□□□□ 0.58
LIMS2-208ENST00000410011 EIF3CLB5ME19 914 aaKnown RBP18.69■□□□□ 0.58
LIMS2-208ENST00000410011 TULP2O00295 520 aa18.69■□□□□ 0.58
LIMS2-208ENST00000410011 KRT86O43790 486 aa18.69■□□□□ 0.58
LIMS2-208ENST00000410011 HERVK_113P62684 666 aa18.69■□□□□ 0.58
LIMS2-208ENST00000410011 GSTO1P78417 241 aa18.69■□□□□ 0.58
LIMS2-208ENST00000410011 ZBED6P86452 979 aa18.69■□□□□ 0.58
LIMS2-208ENST00000410011 RASSF8Q8NHQ8 419 aa18.69■□□□□ 0.58
LIMS2-208ENST00000410011 P2RX5Q93086 422 aa18.69■□□□□ 0.58
LIMS2-208ENST00000410011 EIF3CQ99613 913 aaKnown RBP18.69■□□□□ 0.58
LIMS2-208ENST00000410011 MKNK2Q9HBH9 465 aa18.69■□□□□ 0.58
LIMS2-208ENST00000410011 ANO9A1A5B4 782 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms