RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.15■□□□□ 0.34
MCF2L-210ENST00000409954 ALPK3Q96L96 1907 aa17.15■□□□□ 0.34
MCF2L-210ENST00000409954 GREB1LQ9C091 1923 aaPredicted RBP17.14■□□□□ 0.33
MCF2L-210ENST00000409954 ASB14A6NK59 587 aa17.14■□□□□ 0.33
MCF2L-210ENST00000409954 ADAMTS4O75173 837 aa17.14■□□□□ 0.33
MCF2L-210ENST00000409954 TOP1P11387 765 aaKnown RBP17.14■□□□□ 0.33
MCF2L-210ENST00000409954 NT5C2P49902 561 aa17.14■□□□□ 0.33
MCF2L-210ENST00000409954 KCTD1Q719H9 257 aa17.14■□□□□ 0.33
MCF2L-210ENST00000409954 CHD1LQ86WJ1 897 aa17.14■□□□□ 0.33
MCF2L-210ENST00000409954 DEFB123Q8N688 67 aa17.14■□□□□ 0.33
MCF2L-210ENST00000409954 PCSK9Q8NBP7 692 aaKnown RBP17.14■□□□□ 0.33
MCF2L-210ENST00000409954 AGBL1Q96MI9 1066 aa17.14■□□□□ 0.33
MCF2L-210ENST00000409954 TOX2Q96NM4 488 aa17.14■□□□□ 0.33
MCF2L-210ENST00000409954 TRERF1Q96PN7 1200 aa17.14■□□□□ 0.33
MCF2L-210ENST00000409954 ZHX1Q9UKY1 873 aaPredicted RBP17.14■□□□□ 0.33
MCF2L-210ENST00000409954 PRR12Q9ULL5 1215 aa17.14■□□□□ 0.33
MCF2L-210ENST00000409954 RANBP2P49792 3224 aaKnown RBP17.14■□□□□ 0.33
MCF2L-210ENST00000409954 ZMYM6O95789 1325 aa17.14■□□□□ 0.33
MCF2L-210ENST00000409954 NMT2O60551 498 aa17.13■□□□□ 0.33
MCF2L-210ENST00000409954 SDSP20132 328 aa17.13■□□□□ 0.33
MCF2L-210ENST00000409954 ACLYP53396 1101 aa17.13■□□□□ 0.33
MCF2L-210ENST00000409954 NMIQ13287 307 aaPredicted RBP17.13■□□□□ 0.33
MCF2L-210ENST00000409954 KCNA10Q16322 511 aa17.13■□□□□ 0.33
MCF2L-210ENST00000409954 B4GALNT3Q6L9W6 998 aa17.13■□□□□ 0.33
MCF2L-210ENST00000409954 BTNL9Q6UXG8 535 aa17.13■□□□□ 0.33
MCF2L-210ENST00000409954 MFSD6Q6ZSS7 791 aa17.13■□□□□ 0.33
MCF2L-210ENST00000409954 FAM133AQ8N9E0 248 aa17.13■□□□□ 0.33
MCF2L-210ENST00000409954 PRDM5Q9NQX1 630 aaPredicted RBP17.13■□□□□ 0.33
MCF2L-210ENST00000409954 HOMER2Q9NSB8 354 aa17.13■□□□□ 0.33
MCF2L-210ENST00000409954 RNF146Q9NTX7 359 aa17.13■□□□□ 0.33
MCF2L-210ENST00000409954 PNMA2Q9UL42 364 aa17.13■□□□□ 0.33
MCF2L-210ENST00000409954 ZNF536O15090 1300 aa17.13■□□□□ 0.33
MCF2L-210ENST00000409954 ZNFX1Q9P2E3 1918 aaKnown RBP17.12■□□□□ 0.33
MCF2L-210ENST00000409954 A0A0D9SFI3 127 aa17.12■□□□□ 0.33
MCF2L-210ENST00000409954 A0A1W2PQ45 241 aaPredicted RBP17.12■□□□□ 0.33
MCF2L-210ENST00000409954 A0A1W2PQY0 241 aa17.12■□□□□ 0.33
MCF2L-210ENST00000409954 DCDC2CA8MYV0 355 aa17.12■□□□□ 0.33
MCF2L-210ENST00000409954 ALAS1P13196 640 aa17.12■□□□□ 0.33
MCF2L-210ENST00000409954 CST5P28325 142 aaPredicted RBP17.12■□□□□ 0.33
MCF2L-210ENST00000409954 GJA9P57773 515 aa17.12■□□□□ 0.33
MCF2L-210ENST00000409954 CNTN2Q02246 1040 aa17.12■□□□□ 0.33
MCF2L-210ENST00000409954 NUCB1Q02818 461 aa17.12■□□□□ 0.33
MCF2L-210ENST00000409954 CCDC144BQ3MJ40 725 aa17.12■□□□□ 0.33
MCF2L-210ENST00000409954 RRP12Q5JTH9 1297 aaKnown RBP17.12■□□□□ 0.33
MCF2L-210ENST00000409954 FAM109BQ6ICB4 259 aaPredicted RBP17.12■□□□□ 0.33
MCF2L-210ENST00000409954 CCSAPQ6IQ19 270 aaPredicted RBP17.12■□□□□ 0.33
MCF2L-210ENST00000409954 ARMCX2Q7L311 632 aa17.12■□□□□ 0.33
MCF2L-210ENST00000409954 ANKRD33Q7Z3H0 272 aa17.12■□□□□ 0.33
MCF2L-210ENST00000409954 PLEKHM2Q8IWE5 1019 aa17.12■□□□□ 0.33
MCF2L-210ENST00000409954 CCDC144CPQ8IYA2 1237 aa17.12■□□□□ 0.33
MCF2L-210ENST00000409954 BADQ92934 168 aa17.12■□□□□ 0.33
MCF2L-210ENST00000409954 GLT1D1Q96MS3 346 aa17.12■□□□□ 0.33
MCF2L-210ENST00000409954 YTHDC1Q96MU7 727 aaKnown RBP17.12■□□□□ 0.33
MCF2L-210ENST00000409954 RNF41Q9H4P4 317 aaPredicted RBP17.12■□□□□ 0.33
MCF2L-210ENST00000409954 STARD7Q9NQZ5 370 aa17.12■□□□□ 0.33
MCF2L-210ENST00000409954 PDLIM7Q9NR12 457 aa17.12■□□□□ 0.33
MCF2L-210ENST00000409954 ELP1O95163 1332 aa17.12■□□□□ 0.33
MCF2L-210ENST00000409954 TRIM43BA6NCK2 446 aa17.11■□□□□ 0.33
MCF2L-210ENST00000409954 HIP1O00291 1037 aa17.11■□□□□ 0.33
MCF2L-210ENST00000409954 IGHDP01880 384 aa17.11■□□□□ 0.33
MCF2L-210ENST00000409954 CLTBP09497 229 aa17.11■□□□□ 0.33
MCF2L-210ENST00000409954 NKX3-2P78367 333 aa17.11■□□□□ 0.33
MCF2L-210ENST00000409954 AKNAD1Q5T1N1 836 aa17.11■□□□□ 0.33
MCF2L-210ENST00000409954 TRIM43Q96BQ3 446 aaPredicted RBP17.11■□□□□ 0.33
MCF2L-210ENST00000409954 FGD4Q96M96 766 aa17.11■□□□□ 0.33
MCF2L-210ENST00000409954 TMEM47Q9BQJ4 181 aa17.11■□□□□ 0.33
MCF2L-210ENST00000409954 A1CFQ9NQ94 594 aaKnown RBP17.11■□□□□ 0.33
MCF2L-210ENST00000409954 CCDC171Q6TFL3 1326 aa17.11■□□□□ 0.33
MCF2L-210ENST00000409954 SYNRGQ9UMZ2 1314 aa17.11■□□□□ 0.33
MCF2L-210ENST00000409954 ZNF213O14771 459 aa17.1■□□□□ 0.33
MCF2L-210ENST00000409954 KIAA0355O15063 1070 aa17.1■□□□□ 0.33
MCF2L-210ENST00000409954 ICAM1P05362 532 aa17.1■□□□□ 0.33
MCF2L-210ENST00000409954 C6orf222P0C671 652 aaPredicted RBP17.1■□□□□ 0.33
MCF2L-210ENST00000409954 CCDC96Q2M329 555 aa17.1■□□□□ 0.33
MCF2L-210ENST00000409954 CCDC178Q5BJE1 867 aa17.1■□□□□ 0.33
MCF2L-210ENST00000409954 GNASQ5JWF2 1037 aa17.1■□□□□ 0.33
MCF2L-210ENST00000409954 IQSEC1Q6DN90 963 aa17.1■□□□□ 0.33
MCF2L-210ENST00000409954 CCDC174Q6PII3 467 aa17.1■□□□□ 0.33
MCF2L-210ENST00000409954 SH3RF1Q7Z6J0 888 aa17.1■□□□□ 0.33
MCF2L-210ENST00000409954 ZNF589Q86UQ0 364 aaPredicted RBP17.1■□□□□ 0.33
MCF2L-210ENST00000409954 VTI1AQ96AJ9 217 aa17.1■□□□□ 0.33
MCF2L-210ENST00000409954 CHMP4CQ96CF2 233 aa17.1■□□□□ 0.33
MCF2L-210ENST00000409954 UPF3AQ9H1J1 476 aaKnown RBP17.1■□□□□ 0.33
MCF2L-210ENST00000409954 TMEM39AQ9NV64 488 aa17.1■□□□□ 0.33
MCF2L-210ENST00000409954 MTMR10Q9NXD2 777 aa17.1■□□□□ 0.33
MCF2L-210ENST00000409954 PARP14Q460N5 1801 aa17.1■□□□□ 0.33
MCF2L-210ENST00000409954 LOC102724159A0A0B4J2E5 919 aa17.09■□□□□ 0.33
MCF2L-210ENST00000409954 SOWAHBA6NEL2 793 aa17.09■□□□□ 0.33
MCF2L-210ENST00000409954 RAG1P15918 1043 aa17.09■□□□□ 0.33
MCF2L-210ENST00000409954 TNFAIP2Q03169 654 aa17.09■□□□□ 0.33
MCF2L-210ENST00000409954 PWP2Q15269 919 aaKnown RBP17.09■□□□□ 0.33
MCF2L-210ENST00000409954 SHHQ15465 462 aa17.09■□□□□ 0.33
MCF2L-210ENST00000409954 ESR2Q92731 530 aa17.09■□□□□ 0.33
MCF2L-210ENST00000409954 KATNBL1Q9H079 304 aa17.09■□□□□ 0.33
MCF2L-210ENST00000409954 RANBP17Q9H2T7 1088 aaKnown RBP17.09■□□□□ 0.33
MCF2L-210ENST00000409954 CYP39A1Q9NYL5 469 aa17.09■□□□□ 0.33
MCF2L-210ENST00000409954 ADD3Q9UEY8 706 aaKnown RBP17.09■□□□□ 0.33
MCF2L-210ENST00000409954 CCPG1Q9ULG6 757 aa17.09■□□□□ 0.33
MCF2L-210ENST00000409954 MTMR7Q9Y216 660 aa17.09■□□□□ 0.33
MCF2L-210ENST00000409954 MROH7Q68CQ1 1323 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms