RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 FASTKD5Q7L8L6 764 aaKnown RBP19.34■□□□□ 0.69
GCFC2-202ENST00000409857 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.34■□□□□ 0.69
GCFC2-202ENST00000409857 PAXIP1Q6ZW49 1069 aaPredicted RBP19.33■□□□□ 0.69
GCFC2-202ENST00000409857 SGMS1Q86VZ5 419 aa19.33■□□□□ 0.69
GCFC2-202ENST00000409857 ERCC4Q92889 916 aaPredicted RBP19.33■□□□□ 0.69
GCFC2-202ENST00000409857 CTDNEP1O95476 244 aa19.33■□□□□ 0.68
GCFC2-202ENST00000409857 APOBRQ0VD83 1088 aa19.33■□□□□ 0.68
GCFC2-202ENST00000409857 TPD52L1Q16890 204 aaPredicted RBP19.33■□□□□ 0.68
GCFC2-202ENST00000409857 CCAR1Q8IX12 1150 aaKnown RBP19.33■□□□□ 0.68
GCFC2-202ENST00000409857 KAT14Q9H8E8 782 aa19.33■□□□□ 0.68
GCFC2-202ENST00000409857 EMILIN3Q9NT22 766 aa19.33■□□□□ 0.68
GCFC2-202ENST00000409857 TMOD4Q9NZQ9 345 aa19.33■□□□□ 0.68
GCFC2-202ENST00000409857 CFAP45Q9UL16 551 aa19.33■□□□□ 0.68
GCFC2-202ENST00000409857 CCT2P78371 535 aaKnown RBP19.32■□□□□ 0.68
GCFC2-202ENST00000409857 HTRA3P83110 453 aa19.32■□□□□ 0.68
GCFC2-202ENST00000409857 MOGSQ13724 837 aa19.32■□□□□ 0.68
GCFC2-202ENST00000409857 ZSCAN16Q9H4T2 348 aaPredicted RBP19.32■□□□□ 0.68
GCFC2-202ENST00000409857 USP27XA6NNY8 438 aa19.32■□□□□ 0.68
GCFC2-202ENST00000409857 MAP2K2P36507 400 aa19.32■□□□□ 0.68
GCFC2-202ENST00000409857 HMGCS2P54868 508 aa19.32■□□□□ 0.68
GCFC2-202ENST00000409857 GUCY1B3Q02153 619 aa19.32■□□□□ 0.68
GCFC2-202ENST00000409857 LRRC47Q8N1G4 583 aaKnown RBP19.32■□□□□ 0.68
GCFC2-202ENST00000409857 NSUN7Q8NE18 718 aaKnown RBP19.32■□□□□ 0.68
GCFC2-202ENST00000409857 SMARCC2Q8TAQ2 1214 aa19.32■□□□□ 0.68
GCFC2-202ENST00000409857 NCOA5Q9HCD5 579 aaKnown RBP19.32■□□□□ 0.68
GCFC2-202ENST00000409857 PARP14Q460N5 1801 aa19.32■□□□□ 0.68
GCFC2-202ENST00000409857 F5H6K3 240 aa19.31■□□□□ 0.68
GCFC2-202ENST00000409857 GOLGA6L19H0YKK7 550 aa19.31■□□□□ 0.68
GCFC2-202ENST00000409857 KLRC3Q07444 240 aa19.31■□□□□ 0.68
GCFC2-202ENST00000409857 SREBF2Q12772 1141 aa19.31■□□□□ 0.68
GCFC2-202ENST00000409857 PNMA1Q8ND90 353 aa19.31■□□□□ 0.68
GCFC2-202ENST00000409857 ZNF592Q92610 1267 aa19.31■□□□□ 0.68
GCFC2-202ENST00000409857 GMCL1Q96IK5 515 aa19.31■□□□□ 0.68
GCFC2-202ENST00000409857 SMTNL1A8MU46 457 aa19.31■□□□□ 0.68
GCFC2-202ENST00000409857 VEGFBP49765 207 aa19.31■□□□□ 0.68
GCFC2-202ENST00000409857 MKRN3Q13064 507 aaKnown RBP19.31■□□□□ 0.68
GCFC2-202ENST00000409857 USP28Q96RU2 1077 aa19.31■□□□□ 0.68
GCFC2-202ENST00000409857 SLC45A1Q9Y2W3 748 aa19.31■□□□□ 0.68
GCFC2-202ENST00000409857 CCL15-CCL14A0A0B4J2E2 113 aa19.3■□□□□ 0.68
GCFC2-202ENST00000409857 PTPDC1A2A3K4 754 aa19.3■□□□□ 0.68
GCFC2-202ENST00000409857 TM4SF4P48230 202 aa19.3■□□□□ 0.68
GCFC2-202ENST00000409857 CCL15Q16663 113 aa19.3■□□□□ 0.68
GCFC2-202ENST00000409857 LRRC8AQ8IWT6 810 aa19.3■□□□□ 0.68
GCFC2-202ENST00000409857 ZCCHC17Q9NP64 241 aaKnown RBP19.3■□□□□ 0.68
GCFC2-202ENST00000409857 NAP1L2Q9ULW6 460 aaPredicted RBP19.3■□□□□ 0.68
GCFC2-202ENST00000409857 WDR46O15213 610 aaKnown RBP19.3■□□□□ 0.68
GCFC2-202ENST00000409857 PFKFB2O60825 505 aa19.3■□□□□ 0.68
GCFC2-202ENST00000409857 NDUFB10O96000 172 aa19.3■□□□□ 0.68
GCFC2-202ENST00000409857 EVCP57679 992 aa19.3■□□□□ 0.68
GCFC2-202ENST00000409857 SNW1Q13573 536 aaKnown RBP19.3■□□□□ 0.68
GCFC2-202ENST00000409857 DCAF4Q8WV16 495 aa19.3■□□□□ 0.68
GCFC2-202ENST00000409857 BRI3BPQ8WY22 251 aa19.3■□□□□ 0.68
GCFC2-202ENST00000409857 SENP2Q9HC62 589 aa19.3■□□□□ 0.68
GCFC2-202ENST00000409857 GPHNQ9NQX3 736 aaPredicted RBP19.3■□□□□ 0.68
GCFC2-202ENST00000409857 AGTPBP1Q9UPW5 1226 aa19.3■□□□□ 0.68
GCFC2-202ENST00000409857 SNHG28P0DPA3 235 aa19.29■□□□□ 0.68
GCFC2-202ENST00000409857 VCAM1P19320 739 aa19.29■□□□□ 0.68
GCFC2-202ENST00000409857 KIF23Q02241 960 aaPredicted RBP19.29■□□□□ 0.68
GCFC2-202ENST00000409857 SLFN13Q68D06 897 aa19.29■□□□□ 0.68
GCFC2-202ENST00000409857 ANKRD23Q86SG2 305 aa19.29■□□□□ 0.68
GCFC2-202ENST00000409857 MAP3K14Q99558 947 aa19.29■□□□□ 0.68
GCFC2-202ENST00000409857 CCDC69A6NI79 296 aa19.29■□□□□ 0.68
GCFC2-202ENST00000409857 DDAH1O94760 285 aa19.29■□□□□ 0.68
GCFC2-202ENST00000409857 RCAN1P53805 252 aa19.29■□□□□ 0.68
GCFC2-202ENST00000409857 ZYXQ15942 572 aaKnown RBP19.29■□□□□ 0.68
GCFC2-202ENST00000409857 KIAA1755Q5JYT7 1200 aa19.29■□□□□ 0.68
GCFC2-202ENST00000409857 CATIPQ7Z7H3 387 aa19.29■□□□□ 0.68
GCFC2-202ENST00000409857 RCOR1Q9UKL0 485 aa19.29■□□□□ 0.68
GCFC2-202ENST00000409857 RLFQ13129 1914 aa19.28■□□□□ 0.68
GCFC2-202ENST00000409857 A0A0U1RQG5 324 aaPredicted RBP19.28■□□□□ 0.68
GCFC2-202ENST00000409857 HOXA7P31268 230 aaPredicted RBP19.28■□□□□ 0.68
GCFC2-202ENST00000409857 UTP14CQ5TAP6 766 aaKnown RBP19.28■□□□□ 0.68
GCFC2-202ENST00000409857 GPAT2Q6NUI2 795 aa19.28■□□□□ 0.68
GCFC2-202ENST00000409857 GADL1Q6ZQY3 521 aa19.28■□□□□ 0.68
GCFC2-202ENST00000409857 CDC25BP30305 580 aa19.28■□□□□ 0.68
GCFC2-202ENST00000409857 TROAPQ12815 778 aa19.28■□□□□ 0.68
GCFC2-202ENST00000409857 PABPC4Q13310 644 aaKnown RBP eCLIP19.28■□□□□ 0.68
GCFC2-202ENST00000409857 STX1AQ16623 288 aa19.28■□□□□ 0.68
GCFC2-202ENST00000409857 NFXL1Q6ZNB6 911 aa19.28■□□□□ 0.68
GCFC2-202ENST00000409857 FILIP1Q7Z7B0 1213 aa19.28■□□□□ 0.68
GCFC2-202ENST00000409857 ZNF654Q8IZM8 581 aa19.28■□□□□ 0.68
GCFC2-202ENST00000409857 AOC2O75106 756 aa19.27■□□□□ 0.68
GCFC2-202ENST00000409857 CALM1P0DP23 149 aa19.27■□□□□ 0.68
GCFC2-202ENST00000409857 CALM2P0DP24 149 aa19.27■□□□□ 0.68
GCFC2-202ENST00000409857 CALM3P0DP25 149 aa19.27■□□□□ 0.68
GCFC2-202ENST00000409857 PDHBP11177 359 aa19.27■□□□□ 0.68
GCFC2-202ENST00000409857 GRM1Q13255 1194 aa19.27■□□□□ 0.68
GCFC2-202ENST00000409857 DGKZQ13574 1117 aa19.27■□□□□ 0.68
GCFC2-202ENST00000409857 DHX40Q8IX18 779 aaKnown RBP19.27■□□□□ 0.68
GCFC2-202ENST00000409857 CCDC112Q8NEF3 446 aa19.27■□□□□ 0.68
GCFC2-202ENST00000409857 SLC12A7Q9Y666 1083 aa19.27■□□□□ 0.68
GCFC2-202ENST00000409857 CEP135Q66GS9 1140 aa19.27■□□□□ 0.68
GCFC2-202ENST00000409857 SARM1Q6SZW1 724 aa19.27■□□□□ 0.68
GCFC2-202ENST00000409857 PTPN18Q99952 460 aa19.27■□□□□ 0.68
GCFC2-202ENST00000409857 BECN2A8MW95 431 aa19.26■□□□□ 0.67
GCFC2-202ENST00000409857 SLC1A4P43007 532 aa19.26■□□□□ 0.67
GCFC2-202ENST00000409857 TREML2Q5T2D2 321 aa19.26■□□□□ 0.67
GCFC2-202ENST00000409857 OTUD7BQ6GQQ9 843 aa19.26■□□□□ 0.67
GCFC2-202ENST00000409857 SPICE1Q8N0Z3 855 aa19.26■□□□□ 0.67
GCFC2-202ENST00000409857 ZIC5Q96T25 663 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms