RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 TEX2Q8IWB9 1127 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 DHX29Q7Z478 1369 aaKnown RBP9.23□□□□□ -0.93
SCN9A-203ENST00000409672 ELP1O95163 1332 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 SOX5P35711 763 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 FAM160B1Q5W0V3 765 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 C8orf74Q6P047 294 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 CCDC62Q6P9F0 684 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 PEX26Q7Z412 305 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 MCUR1Q96AQ8 359 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 SGK1O00141 431 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 ATP6V1E1P36543 226 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 ATP11AP98196 1134 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 PRPSAP1Q14558 356 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 GBP6Q6ZN66 633 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 SPDL1Q96EA4 605 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 DPYSL4O14531 572 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 CD58P19256 250 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 RPS6KB1P23443 525 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 CACNB3P54284 484 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 CACNB2Q08289 660 aaPredicted RBP9.23□□□□□ -0.93
SCN9A-203ENST00000409672 RNF219Q5W0B1 726 aaPredicted RBP9.23□□□□□ -0.93
SCN9A-203ENST00000409672 KCNH3Q9ULD8 1083 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 BAG2O95816 211 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 NOP14P78316 857 aaKnown RBP9.23□□□□□ -0.93
SCN9A-203ENST00000409672 HELLSQ9NRZ9 838 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 RAB20Q9NX57 234 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 RNF181Q9P0P0 153 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 MRPL11Q9Y3B7 192 aaKnown RBP9.23□□□□□ -0.93
SCN9A-203ENST00000409672 ARHGAP42A6NI28 874 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 ZNF772Q68DY9 489 aaPredicted RBP9.23□□□□□ -0.93
SCN9A-203ENST00000409672 ATP2A3Q93084 1043 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 ZNF577Q9BSK1 485 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 TEKT3Q9BXF9 490 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 INPP1P49441 399 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 BMP2KLQ5H9B9 411 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 DSTYKQ6XUX3 929 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 RFX6Q8HWS3 928 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 FAM178BQ8IXR5 827 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 AFG1LQ8WV93 481 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 TIAM1Q13009 1591 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 GOLGA8SH3BPF8 625 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 ANXA13P27216 316 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 SSTR3P32745 418 aaPredicted RBP9.23□□□□□ -0.93
SCN9A-203ENST00000409672 FASTKD5Q7L8L6 764 aaKnown RBP9.23□□□□□ -0.93
SCN9A-203ENST00000409672 SCN4BQ8IWT1 228 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 ANKRD36BP1Q96IX9 119 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 FGD4Q96M96 766 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 PAXBP1Q9Y5B6 917 aa9.23□□□□□ -0.93
SCN9A-203ENST00000409672 NSUN2Q08J23 767 aaKnown RBP eCLIP9.22□□□□□ -0.93
SCN9A-203ENST00000409672 ZNF449Q6P9G9 518 aa9.22□□□□□ -0.93
SCN9A-203ENST00000409672 ELMOD1Q8N336 334 aa9.22□□□□□ -0.93
SCN9A-203ENST00000409672 SCAF8Q9UPN6 1271 aaKnown RBP9.22□□□□□ -0.93
SCN9A-203ENST00000409672 PCDHA1Q9Y5I3 950 aa9.22□□□□□ -0.93
SCN9A-203ENST00000409672 SLC9C1Q4G0N8 1177 aa9.22□□□□□ -0.93
SCN9A-203ENST00000409672 DIS3L2Q8IYB7 885 aaKnown RBP9.22□□□□□ -0.93
SCN9A-203ENST00000409672 RETREG2Q8NC44 543 aa9.22□□□□□ -0.93
SCN9A-203ENST00000409672 MIPOL1Q8TD10 442 aa9.22□□□□□ -0.93
SCN9A-203ENST00000409672 TRPC5Q9UL62 973 aaPredicted RBP9.22□□□□□ -0.93
SCN9A-203ENST00000409672 MAP3K19Q56UN5 1328 aa9.22□□□□□ -0.93
SCN9A-203ENST00000409672 SMIM24O75264 130 aa9.22□□□□□ -0.93
SCN9A-203ENST00000409672 IVLP07476 585 aa9.22□□□□□ -0.93
SCN9A-203ENST00000409672 CCNA1P78396 465 aa9.22□□□□□ -0.93
SCN9A-203ENST00000409672 PPP2R3AQ06190 1150 aa9.22□□□□□ -0.93
SCN9A-203ENST00000409672 PPARAQ07869 468 aa9.22□□□□□ -0.93
SCN9A-203ENST00000409672 KCTD17Q8N5Z5 321 aa9.22□□□□□ -0.93
SCN9A-203ENST00000409672 PDCD7Q8N8D1 485 aaKnown RBP9.22□□□□□ -0.93
SCN9A-203ENST00000409672 SLC39A2Q9NP94 309 aa9.22□□□□□ -0.93
SCN9A-203ENST00000409672 GLYCTKQ8IVS8 523 aa9.22□□□□□ -0.93
SCN9A-203ENST00000409672 TTC25Q96NG3 672 aa9.22□□□□□ -0.93
SCN9A-203ENST00000409672 LBHD1Q9BQE6 289 aaPredicted RBP9.22□□□□□ -0.93
SCN9A-203ENST00000409672 DENND3A2RUS2 1198 aa9.22□□□□□ -0.93
SCN9A-203ENST00000409672 PCK1P35558 622 aa9.22□□□□□ -0.93
SCN9A-203ENST00000409672 PLCB1Q9NQ66 1216 aa9.22□□□□□ -0.93
SCN9A-203ENST00000409672 SAMSN1Q9NSI8 373 aaKnown RBP9.22□□□□□ -0.93
SCN9A-203ENST00000409672 RABGAP1Q9Y3P9 1069 aa9.22□□□□□ -0.93
SCN9A-203ENST00000409672 PTPREP23469 700 aa9.22□□□□□ -0.93
SCN9A-203ENST00000409672 SUPT20HL1Q3ZLR7 823 aa9.22□□□□□ -0.93
SCN9A-203ENST00000409672 OTUD7AQ8TE49 926 aaPredicted RBP9.22□□□□□ -0.93
SCN9A-203ENST00000409672 APPBP2Q92624 585 aa9.22□□□□□ -0.93
SCN9A-203ENST00000409672 GJA10Q969M2 543 aa9.22□□□□□ -0.93
SCN9A-203ENST00000409672 C1orf112Q9NSG2 853 aa9.22□□□□□ -0.93
SCN9A-203ENST00000409672 ACTN4O43707 911 aaKnown RBP9.22□□□□□ -0.93
SCN9A-203ENST00000409672 JAK2O60674 1132 aa9.22□□□□□ -0.93
SCN9A-203ENST00000409672 LRRN2O75325 713 aa9.22□□□□□ -0.93
SCN9A-203ENST00000409672 ADCY8P40145 1251 aa9.22□□□□□ -0.93
SCN9A-203ENST00000409672 SLC8A2Q9UPR5 921 aa9.22□□□□□ -0.93
SCN9A-203ENST00000409672 SCAF11Q99590 1463 aaKnown RBP9.22□□□□□ -0.93
SCN9A-203ENST00000409672 KIF11P52732 1056 aa9.22□□□□□ -0.93
SCN9A-203ENST00000409672 GCKRQ14397 625 aa9.22□□□□□ -0.93
SCN9A-203ENST00000409672 KIF3CO14782 793 aa9.21□□□□□ -0.93
SCN9A-203ENST00000409672 CLIC2O15247 247 aa9.21□□□□□ -0.93
SCN9A-203ENST00000409672 ATP5DP30049 168 aa9.21□□□□□ -0.93
SCN9A-203ENST00000409672 PDE6CP51160 858 aa9.21□□□□□ -0.93
SCN9A-203ENST00000409672 SFMBT2Q5VUG0 894 aa9.21□□□□□ -0.93
SCN9A-203ENST00000409672 SLFN13Q68D06 897 aa9.21□□□□□ -0.93
SCN9A-203ENST00000409672 CCDC13Q8IYE1 715 aa9.21□□□□□ -0.93
SCN9A-203ENST00000409672 ANKRD44Q8N8A2 993 aa9.21□□□□□ -0.93
SCN9A-203ENST00000409672 CALCOCO1Q9P1Z2 691 aa9.21□□□□□ -0.93
SCN9A-203ENST00000409672 ASAP1Q9ULH1 1129 aa9.21□□□□□ -0.93
SCN9A-203ENST00000409672 GDAQ9Y2T3 454 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms