RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 SPC25Q9HBM1 224 aa20.25■□□□□ 0.83
SCRN1-203ENST00000409570 RAVER2Q9HCJ3 691 aaKnown RBP20.25■□□□□ 0.83
SCRN1-203ENST00000409570 REV3LO60673 3130 aa20.25■□□□□ 0.83
SCRN1-203ENST00000409570 BDP1A6H8Y1 2624 aa20.24■□□□□ 0.83
SCRN1-203ENST00000409570 ZBED4O75132 1171 aa20.24■□□□□ 0.83
SCRN1-203ENST00000409570 COL9A1P20849 921 aa20.24■□□□□ 0.83
SCRN1-203ENST00000409570 GNASQ5JWF2 1037 aa20.24■□□□□ 0.83
SCRN1-203ENST00000409570 PSRC1Q6PGN9 363 aaPredicted RBP20.24■□□□□ 0.83
SCRN1-203ENST00000409570 ARMCX2Q7L311 632 aa20.24■□□□□ 0.83
SCRN1-203ENST00000409570 STK11IPQ8N1F8 1099 aa20.24■□□□□ 0.83
SCRN1-203ENST00000409570 STRBPQ96SI9 672 aaKnown RBP20.24■□□□□ 0.83
SCRN1-203ENST00000409570 KATNBL1Q9H079 304 aa20.24■□□□□ 0.83
SCRN1-203ENST00000409570 SLC38A10Q9HBR0 1119 aa20.24■□□□□ 0.83
SCRN1-203ENST00000409570 LRRC37A2A6NM11 1700 aa20.24■□□□□ 0.83
SCRN1-203ENST00000409570 IGKV6D-41A0A0C4DH26 115 aa20.23■□□□□ 0.83
SCRN1-203ENST00000409570 GSG1L2A8MUP6 293 aa20.23■□□□□ 0.83
SCRN1-203ENST00000409570 CD4P01730 458 aa20.23■□□□□ 0.83
SCRN1-203ENST00000409570 NKX3-2P78367 333 aa20.23■□□□□ 0.83
SCRN1-203ENST00000409570 HNRNPUQ00839 825 aaKnown RBP eCLIP20.23■□□□□ 0.83
SCRN1-203ENST00000409570 ADGRE1Q14246 886 aa20.23■□□□□ 0.83
SCRN1-203ENST00000409570 ZSCAN25Q6NSZ9 544 aa20.23■□□□□ 0.83
SCRN1-203ENST00000409570 ANKRD35Q8N283 1001 aa20.23■□□□□ 0.83
SCRN1-203ENST00000409570 ATXN2LQ8WWM7 1075 aaKnown RBP20.23■□□□□ 0.83
SCRN1-203ENST00000409570 KIFC2Q96AC6 838 aa20.23■□□□□ 0.83
SCRN1-203ENST00000409570 MKNK2Q9HBH9 465 aa20.23■□□□□ 0.83
SCRN1-203ENST00000409570 ZBTB40Q9NUA8 1239 aa20.23■□□□□ 0.83
SCRN1-203ENST00000409570 CLIP2Q9UDT6 1046 aa20.23■□□□□ 0.83
SCRN1-203ENST00000409570 TLR3O15455 904 aaKnown RBP20.22■□□□□ 0.83
SCRN1-203ENST00000409570 CYP2C18P33260 490 aa20.22■□□□□ 0.83
SCRN1-203ENST00000409570 CHST13Q8NET6 341 aa20.22■□□□□ 0.83
SCRN1-203ENST00000409570 HERVK_113Q902F9 699 aa20.22■□□□□ 0.83
SCRN1-203ENST00000409570 IL23AQ9NPF7 189 aa20.22■□□□□ 0.83
SCRN1-203ENST00000409570 CXXC1Q9P0U4 656 aaPredicted RBP20.22■□□□□ 0.83
SCRN1-203ENST00000409570 THEGQ9P2T0 379 aa20.22■□□□□ 0.83
SCRN1-203ENST00000409570 FBXO40Q9UH90 709 aa20.22■□□□□ 0.83
SCRN1-203ENST00000409570 CTDP1Q9Y5B0 961 aaPredicted RBP20.22■□□□□ 0.83
SCRN1-203ENST00000409570 LCTP09848 1927 aa20.21■□□□□ 0.83
SCRN1-203ENST00000409570 BEX3Q00994 111 aa20.21■□□□□ 0.83
SCRN1-203ENST00000409570 CCDC144CPQ8IYA2 1237 aa20.21■□□□□ 0.83
SCRN1-203ENST00000409570 MIER1Q8N108 512 aa20.21■□□□□ 0.83
SCRN1-203ENST00000409570 MKL1Q969V6 931 aa20.21■□□□□ 0.83
SCRN1-203ENST00000409570 ASB2Q96Q27 587 aa20.21■□□□□ 0.83
SCRN1-203ENST00000409570 FEM1BQ9UK73 627 aa20.21■□□□□ 0.83
SCRN1-203ENST00000409570 ASTN1O14525 1302 aa20.21■□□□□ 0.83
SCRN1-203ENST00000409570 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.2■□□□□ 0.82
SCRN1-203ENST00000409570 MINDY4BA8MYZ0 360 aa20.2■□□□□ 0.82
SCRN1-203ENST00000409570 OAZ1P54368 228 aa20.2■□□□□ 0.82
SCRN1-203ENST00000409570 CNTN2Q02246 1040 aa20.2■□□□□ 0.82
SCRN1-203ENST00000409570 RAB30Q15771 203 aa20.2■□□□□ 0.82
SCRN1-203ENST00000409570 GIMAP6Q6P9H5 292 aa20.2■□□□□ 0.82
SCRN1-203ENST00000409570 SLC43A3Q8NBI5 491 aa20.2■□□□□ 0.82
SCRN1-203ENST00000409570 MSRAQ9UJ68 235 aa20.2■□□□□ 0.82
SCRN1-203ENST00000409570 MS4A1P11836 297 aa20.19■□□□□ 0.82
SCRN1-203ENST00000409570 CCDC85BQ15834 202 aaPredicted RBP20.19■□□□□ 0.82
SCRN1-203ENST00000409570 FAM133AQ8N9E0 248 aa20.19■□□□□ 0.82
SCRN1-203ENST00000409570 CEP95Q96GE4 821 aa20.19■□□□□ 0.82
SCRN1-203ENST00000409570 NKX2-4Q9H2Z4 354 aa20.19■□□□□ 0.82
SCRN1-203ENST00000409570 DDX19BQ9UMR2 479 aa20.19■□□□□ 0.82
SCRN1-203ENST00000409570 YBX2Q9Y2T7 364 aaKnown RBP20.19■□□□□ 0.82
SCRN1-203ENST00000409570 COG6Q9Y2V7 657 aa20.19■□□□□ 0.82
SCRN1-203ENST00000409570 UMODL1Q5DID0 1318 aa20.19■□□□□ 0.82
SCRN1-203ENST00000409570 FGBP02675 491 aa20.18■□□□□ 0.82
SCRN1-203ENST00000409570 TNFAIP2Q03169 654 aa20.18■□□□□ 0.82
SCRN1-203ENST00000409570 CXCL17Q6UXB2 119 aa20.18■□□□□ 0.82
SCRN1-203ENST00000409570 LRRC47Q8N1G4 583 aaKnown RBP20.18■□□□□ 0.82
SCRN1-203ENST00000409570 ADAMTS19Q8TE59 1207 aa20.18■□□□□ 0.82
SCRN1-203ENST00000409570 OSBP2Q969R2 916 aa20.18■□□□□ 0.82
SCRN1-203ENST00000409570 EPB41L4AQ9HCS5 686 aaPredicted RBP20.18■□□□□ 0.82
SCRN1-203ENST00000409570 HOMER2Q9NSB8 354 aa20.18■□□□□ 0.82
SCRN1-203ENST00000409570 MTMR4Q9NYA4 1195 aa20.18■□□□□ 0.82
SCRN1-203ENST00000409570 RAPGEFL1Q9UHV5 662 aa20.18■□□□□ 0.82
SCRN1-203ENST00000409570 GNEQ9Y223 722 aaKnown RBP20.18■□□□□ 0.82
SCRN1-203ENST00000409570 SCN5AQ14524 2016 aa20.18■□□□□ 0.82
SCRN1-203ENST00000409570 TRANK1O15050 2925 aa20.18■□□□□ 0.82
SCRN1-203ENST00000409570 PRRC2BQ5JSZ5 2229 aaKnown RBP20.18■□□□□ 0.82
SCRN1-203ENST00000409570 PRDM1O75626 825 aa20.17■□□□□ 0.82
SCRN1-203ENST00000409570 IGFBP4P22692 258 aa20.17■□□□□ 0.82
SCRN1-203ENST00000409570 MRPS5P82675 430 aaKnown RBP20.17■□□□□ 0.82
SCRN1-203ENST00000409570 ZNF444Q8N0Y2 327 aaPredicted RBP20.17■□□□□ 0.82
SCRN1-203ENST00000409570 GMCL1P1Q8NEA9 526 aa20.17■□□□□ 0.82
SCRN1-203ENST00000409570 HIPK3Q9H422 1215 aa20.17■□□□□ 0.82
SCRN1-203ENST00000409570 SYNPO2Q9UMS6 1093 aa20.17■□□□□ 0.82
SCRN1-203ENST00000409570 GRIN2DO15399 1336 aa20.17■□□□□ 0.82
SCRN1-203ENST00000409570 SOWAHBA6NEL2 793 aa20.16■□□□□ 0.82
SCRN1-203ENST00000409570 SMARCA5O60264 1052 aaPredicted RBP20.16■□□□□ 0.82
SCRN1-203ENST00000409570 CABYRO75952 493 aa20.16■□□□□ 0.82
SCRN1-203ENST00000409570 PTGS1P23219 599 aa20.16■□□□□ 0.82
SCRN1-203ENST00000409570 ITGA7Q13683 1181 aa20.16■□□□□ 0.82
SCRN1-203ENST00000409570 APPBP2Q92624 585 aa20.16■□□□□ 0.82
SCRN1-203ENST00000409570 MTIF3Q9H2K0 278 aaKnown RBP20.16■□□□□ 0.82
SCRN1-203ENST00000409570 ACAD9Q9H845 621 aa20.16■□□□□ 0.82
SCRN1-203ENST00000409570 SLC28A3Q9HAS3 691 aa20.16■□□□□ 0.82
SCRN1-203ENST00000409570 A1CFQ9NQ94 594 aaKnown RBP20.16■□□□□ 0.82
SCRN1-203ENST00000409570 TTLL1O95922 423 aa20.15■□□□□ 0.82
SCRN1-203ENST00000409570 FDX1P10109 184 aa20.15■□□□□ 0.82
SCRN1-203ENST00000409570 BMP3P12645 472 aa20.15■□□□□ 0.82
SCRN1-203ENST00000409570 FSCN1Q16658 493 aaKnown RBP20.15■□□□□ 0.82
SCRN1-203ENST00000409570 SLFN13Q68D06 897 aa20.15■□□□□ 0.82
SCRN1-203ENST00000409570 NOL8Q76FK4 1167 aaKnown RBP20.15■□□□□ 0.82
SCRN1-203ENST00000409570 OTOP2Q7RTS6 562 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms