RNA–Protein interactions for RNA: ENST00000409498.6

SUMO1-207, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-207ENST00000409498 ABRAQ8N0Z2 381 aa17.22■□□□□ 0.35
SUMO1-207ENST00000409498 FANCBQ8NB91 859 aa17.22■□□□□ 0.35
SUMO1-207ENST00000409498 CTCFLQ8NI51 663 aaPredicted RBP17.22■□□□□ 0.35
SUMO1-207ENST00000409498 USP6NLQ92738 828 aa17.22■□□□□ 0.35
SUMO1-207ENST00000409498 LZTS2Q9BRK4 669 aa17.22■□□□□ 0.35
SUMO1-207ENST00000409498 C22orf23Q9BZE7 217 aa17.22■□□□□ 0.35
SUMO1-207ENST00000409498 UBA5Q9GZZ9 404 aa17.22■□□□□ 0.35
SUMO1-207ENST00000409498 ISY1Q9ULR0 285 aaKnown RBP17.22■□□□□ 0.35
SUMO1-207ENST00000409498 ZNF236Q9UL36 1845 aa17.21■□□□□ 0.35
SUMO1-207ENST00000409498 GRB14Q14449 540 aa17.21■□□□□ 0.35
SUMO1-207ENST00000409498 SLC35G1Q2M3R5 365 aa17.21■□□□□ 0.35
SUMO1-207ENST00000409498 SNRNP48Q6IEG0 339 aaKnown RBP17.21■□□□□ 0.35
SUMO1-207ENST00000409498 SAMD1Q6SPF0 538 aaPredicted RBP17.21■□□□□ 0.35
SUMO1-207ENST00000409498 SYNE3Q6ZMZ3 975 aa17.21■□□□□ 0.35
SUMO1-207ENST00000409498 CHST13Q8NET6 341 aa17.21■□□□□ 0.35
SUMO1-207ENST00000409498 NUP133Q8WUM0 1156 aa17.21■□□□□ 0.35
SUMO1-207ENST00000409498 SOCS4Q8WXH5 440 aa17.21■□□□□ 0.35
SUMO1-207ENST00000409498 BRF1Q92994 677 aa17.21■□□□□ 0.35
SUMO1-207ENST00000409498 KIF2CQ99661 725 aa17.21■□□□□ 0.35
SUMO1-207ENST00000409498 MYL10Q9BUA6 226 aa17.21■□□□□ 0.35
SUMO1-207ENST00000409498 UPF3BQ9BZI7 483 aaKnown RBP17.21■□□□□ 0.35
SUMO1-207ENST00000409498 JMJD4Q9H9V9 463 aa17.21■□□□□ 0.35
SUMO1-207ENST00000409498 RAVER2Q9HCJ3 691 aaKnown RBP17.21■□□□□ 0.35
SUMO1-207ENST00000409498 RIPK3Q9Y572 518 aa17.21■□□□□ 0.35
SUMO1-207ENST00000409498 CTDP1Q9Y5B0 961 aaPredicted RBP17.21■□□□□ 0.35
SUMO1-207ENST00000409498 SLC15A5A6NIM6 579 aa17.2■□□□□ 0.34
SUMO1-207ENST00000409498 ZBTB43O43298 467 aa17.2■□□□□ 0.34
SUMO1-207ENST00000409498 CYTH3O43739 400 aa17.2■□□□□ 0.34
SUMO1-207ENST00000409498 PLS1Q14651 629 aa17.2■□□□□ 0.34
SUMO1-207ENST00000409498 CCAR1Q8IX12 1150 aaKnown RBP17.2■□□□□ 0.34
SUMO1-207ENST00000409498 CPXCR1Q8N123 301 aa17.2■□□□□ 0.34
SUMO1-207ENST00000409498 IL27Q8NEV9 243 aa17.2■□□□□ 0.34
SUMO1-207ENST00000409498 SPZ1Q9BXG8 430 aa17.2■□□□□ 0.34
SUMO1-207ENST00000409498 MAF1Q9H063 256 aa17.2■□□□□ 0.34
SUMO1-207ENST00000409498 CPVLQ9H3G5 476 aa17.2■□□□□ 0.34
SUMO1-207ENST00000409498 PDRG1Q9NUG6 133 aa17.2■□□□□ 0.34
SUMO1-207ENST00000409498 RBM28Q9NW13 759 aaKnown RBP17.2■□□□□ 0.34
SUMO1-207ENST00000409498 FBXO40Q9UH90 709 aa17.2■□□□□ 0.34
SUMO1-207ENST00000409498 GABRQQ9UN88 632 aa17.2■□□□□ 0.34
SUMO1-207ENST00000409498 KLF18A0A0U1RQI7 1052 aa17.19■□□□□ 0.34
SUMO1-207ENST00000409498 HOXC6P09630 235 aa17.19■□□□□ 0.34
SUMO1-207ENST00000409498 XRCC5P13010 732 aaKnown RBP17.19■□□□□ 0.34
SUMO1-207ENST00000409498 FLT3LGP49771 235 aa17.19■□□□□ 0.34
SUMO1-207ENST00000409498 FGD1P98174 961 aa17.19■□□□□ 0.34
SUMO1-207ENST00000409498 PRKCZQ05513 592 aa17.19■□□□□ 0.34
SUMO1-207ENST00000409498 APOBRQ0VD83 1088 aa17.19■□□□□ 0.34
SUMO1-207ENST00000409498 NBPF11Q86T75 865 aa17.19■□□□□ 0.34
SUMO1-207ENST00000409498 NCAPG2Q86XI2 1143 aa17.19■□□□□ 0.34
SUMO1-207ENST00000409498 ZNF274Q96GC6 653 aaPredicted RBP17.19■□□□□ 0.34
SUMO1-207ENST00000409498 AGBL1Q96MI9 1066 aa17.19■□□□□ 0.34
SUMO1-207ENST00000409498 NUDT12Q9BQG2 462 aa17.19■□□□□ 0.34
SUMO1-207ENST00000409498 MCOLN1Q9GZU1 580 aa17.19■□□□□ 0.34
SUMO1-207ENST00000409498 UPF2Q9HAU5 1272 aaKnown RBP17.19■□□□□ 0.34
SUMO1-207ENST00000409498 FAM217BQ9NTX9 383 aaPredicted RBP17.19■□□□□ 0.34
SUMO1-207ENST00000409498 HPS5Q9UPZ3 1129 aa17.19■□□□□ 0.34
SUMO1-207ENST00000409498 ZNFX1Q9P2E3 1918 aaKnown RBP17.18■□□□□ 0.34
SUMO1-207ENST00000409498 SNAP25P60880 206 aa17.18■□□□□ 0.34
SUMO1-207ENST00000409498 MAP2K5Q13163 448 aa17.18■□□□□ 0.34
SUMO1-207ENST00000409498 CDC37Q16543 378 aaPredicted RBP17.18■□□□□ 0.34
SUMO1-207ENST00000409498 TMTC3Q6ZXV5 915 aa17.18■□□□□ 0.34
SUMO1-207ENST00000409498 MICU3Q86XE3 530 aa17.18■□□□□ 0.34
SUMO1-207ENST00000409498 PXYLP1Q8TE99 480 aa17.18■□□□□ 0.34
SUMO1-207ENST00000409498 IVNS1ABPQ9Y6Y0 642 aa17.18■□□□□ 0.34
SUMO1-207ENST00000409498 SMCHD1A6NHR9 2005 aa17.18■□□□□ 0.34
SUMO1-207ENST00000409498 ZBTB5O15062 677 aa17.17■□□□□ 0.34
SUMO1-207ENST00000409498 IGHA2P01877 340 aa17.17■□□□□ 0.34
SUMO1-207ENST00000409498 FCER1AP12319 257 aa17.17■□□□□ 0.34
SUMO1-207ENST00000409498 RXRAP19793 462 aa17.17■□□□□ 0.34
SUMO1-207ENST00000409498 PDIA3P30101 505 aaKnown RBP17.17■□□□□ 0.34
SUMO1-207ENST00000409498 ANKRD1Q15327 319 aa17.17■□□□□ 0.34
SUMO1-207ENST00000409498 QRICH1Q2TAL8 776 aa17.17■□□□□ 0.34
SUMO1-207ENST00000409498 CCDC174Q6PII3 467 aa17.17■□□□□ 0.34
SUMO1-207ENST00000409498 SRBD1Q8N5C6 995 aaKnown RBP17.17■□□□□ 0.34
SUMO1-207ENST00000409498 ACAD9Q9H845 621 aa17.17■□□□□ 0.34
SUMO1-207ENST00000409498 CCPG1Q9ULG6 757 aa17.17■□□□□ 0.34
SUMO1-207ENST00000409498 PTCH2Q9Y6C5 1203 aa17.17■□□□□ 0.34
SUMO1-207ENST00000409498 CCDC196A0A1B0GTZ2 297 aa17.16■□□□□ 0.34
SUMO1-207ENST00000409498 PLEKHA8P1O95397 391 aa17.16■□□□□ 0.34
SUMO1-207ENST00000409498 CDC27P30260 824 aa17.16■□□□□ 0.34
SUMO1-207ENST00000409498 RGS2P41220 211 aa17.16■□□□□ 0.34
SUMO1-207ENST00000409498 FUT2Q10981 343 aa17.16■□□□□ 0.34
SUMO1-207ENST00000409498 RTN1Q16799 776 aa17.16■□□□□ 0.34
SUMO1-207ENST00000409498 RGS22Q8NE09 1264 aa17.16■□□□□ 0.34
SUMO1-207ENST00000409498 TBC1D32Q96NH3 1257 aa17.16■□□□□ 0.34
SUMO1-207ENST00000409498 TRERF1Q96PN7 1200 aa17.16■□□□□ 0.34
SUMO1-207ENST00000409498 VAT1LQ9HCJ6 419 aa17.16■□□□□ 0.34
SUMO1-207ENST00000409498 RNF146Q9NTX7 359 aa17.16■□□□□ 0.34
SUMO1-207ENST00000409498 DIS3Q9Y2L1 958 aaKnown RBP17.16■□□□□ 0.34
SUMO1-207ENST00000409498 MYH6P13533 1939 aa17.15■□□□□ 0.34
SUMO1-207ENST00000409498 DNAJC25-GNG10A0A024R161 153 aa17.15■□□□□ 0.34
SUMO1-207ENST00000409498 PNMA6FA0A0J9YX94 578 aa17.15■□□□□ 0.34
SUMO1-207ENST00000409498 GOLGA8AA7E2F4 631 aa17.15■□□□□ 0.34
SUMO1-207ENST00000409498 GOLGA8BA8MQT2 603 aa17.15■□□□□ 0.34
SUMO1-207ENST00000409498 ECM2O94769 699 aaPredicted RBP17.15■□□□□ 0.34
SUMO1-207ENST00000409498 ALAS1P13196 640 aa17.15■□□□□ 0.34
SUMO1-207ENST00000409498 ADORA2AP29274 412 aa17.15■□□□□ 0.34
SUMO1-207ENST00000409498 METAP2P50579 478 aaKnown RBP eCLIP17.15■□□□□ 0.34
SUMO1-207ENST00000409498 TRAF1Q13077 416 aa17.15■□□□□ 0.34
SUMO1-207ENST00000409498 KCTD2Q14681 263 aa17.15■□□□□ 0.34
SUMO1-207ENST00000409498 WDR78Q5VTH9 848 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms