RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 CCDC174Q6PII3 467 aa23.66■■□□□ 1.38
PTCD3-202ENST00000409326 Q6ZUG5 572 aa23.66■■□□□ 1.38
PTCD3-202ENST00000409326 TNS4Q8IZW8 715 aa23.66■■□□□ 1.38
PTCD3-202ENST00000409326 NUDT12Q9BQG2 462 aa23.66■■□□□ 1.38
PTCD3-202ENST00000409326 CYP46A1Q9Y6A2 500 aa23.66■■□□□ 1.38
PTCD3-202ENST00000409326 IVNS1ABPQ9Y6Y0 642 aa23.66■■□□□ 1.38
PTCD3-202ENST00000409326 IRF5Q13568 498 aa23.65■■□□□ 1.38
PTCD3-202ENST00000409326 GRB14Q14449 540 aa23.65■■□□□ 1.38
PTCD3-202ENST00000409326 MORN1Q5T089 497 aa23.65■■□□□ 1.38
PTCD3-202ENST00000409326 APOA5Q6Q788 366 aa23.65■■□□□ 1.38
PTCD3-202ENST00000409326 ADGRF4Q8IZF3 695 aa23.65■■□□□ 1.38
PTCD3-202ENST00000409326 CTCFLQ8NI51 663 aaPredicted RBP23.65■■□□□ 1.38
PTCD3-202ENST00000409326 RAET1EQ8TD07 263 aa23.65■■□□□ 1.38
PTCD3-202ENST00000409326 AGXT2Q9BYV1 514 aa23.65■■□□□ 1.38
PTCD3-202ENST00000409326 RIPK3Q9Y572 518 aa23.65■■□□□ 1.38
PTCD3-202ENST00000409326 SLC15A5A6NIM6 579 aa23.64■■□□□ 1.37
PTCD3-202ENST00000409326 STRNO43815 780 aa23.64■■□□□ 1.37
PTCD3-202ENST00000409326 ICAM1P05362 532 aa23.64■■□□□ 1.37
PTCD3-202ENST00000409326 KIF5BP33176 963 aa23.64■■□□□ 1.37
PTCD3-202ENST00000409326 SYNE3Q6ZMZ3 975 aa23.64■■□□□ 1.37
PTCD3-202ENST00000409326 USP6NLQ92738 828 aa23.64■■□□□ 1.37
PTCD3-202ENST00000409326 AGBL1Q96MI9 1066 aa23.64■■□□□ 1.37
PTCD3-202ENST00000409326 UPF3BQ9BZI7 483 aaKnown RBP23.64■■□□□ 1.37
PTCD3-202ENST00000409326 BRPF3Q9ULD4 1205 aa23.64■■□□□ 1.37
PTCD3-202ENST00000409326 RBBP6Q7Z6E9 1792 aaKnown RBP23.64■■□□□ 1.37
PTCD3-202ENST00000409326 RXRAP19793 462 aa23.63■■□□□ 1.37
PTCD3-202ENST00000409326 SLC4A3P48751 1232 aa23.63■■□□□ 1.37
PTCD3-202ENST00000409326 CDC37Q16543 378 aaPredicted RBP23.63■■□□□ 1.37
PTCD3-202ENST00000409326 TKFCQ3LXA3 575 aa23.63■■□□□ 1.37
PTCD3-202ENST00000409326 MICU3Q86XE3 530 aa23.63■■□□□ 1.37
PTCD3-202ENST00000409326 ABRAQ8N0Z2 381 aa23.63■■□□□ 1.37
PTCD3-202ENST00000409326 CHST13Q8NET6 341 aa23.63■■□□□ 1.37
PTCD3-202ENST00000409326 BRF1Q92994 677 aa23.63■■□□□ 1.37
PTCD3-202ENST00000409326 JMJD4Q9H9V9 463 aa23.63■■□□□ 1.37
PTCD3-202ENST00000409326 PNMA2Q9UL42 364 aa23.63■■□□□ 1.37
PTCD3-202ENST00000409326 CCPG1Q9ULG6 757 aa23.63■■□□□ 1.37
PTCD3-202ENST00000409326 HPS5Q9UPZ3 1129 aa23.63■■□□□ 1.37
PTCD3-202ENST00000409326 KLF18A0A0U1RQI7 1052 aa23.62■■□□□ 1.37
PTCD3-202ENST00000409326 DHX16O60231 1041 aaKnown RBP23.62■■□□□ 1.37
PTCD3-202ENST00000409326 RGS2P41220 211 aa23.62■■□□□ 1.37
PTCD3-202ENST00000409326 RCAN1P53805 252 aa23.62■■□□□ 1.37
PTCD3-202ENST00000409326 MAP2K5Q13163 448 aa23.62■■□□□ 1.37
PTCD3-202ENST00000409326 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.62■■□□□ 1.37
PTCD3-202ENST00000409326 RIOX1Q9H6W3 641 aa23.62■■□□□ 1.37
PTCD3-202ENST00000409326 FBXO40Q9UH90 709 aa23.62■■□□□ 1.37
PTCD3-202ENST00000409326 ZBTB43O43298 467 aa23.61■■□□□ 1.37
PTCD3-202ENST00000409326 FCER1AP12319 257 aa23.61■■□□□ 1.37
PTCD3-202ENST00000409326 ADORA2AP29274 412 aa23.61■■□□□ 1.37
PTCD3-202ENST00000409326 GNAQP50148 359 aa23.61■■□□□ 1.37
PTCD3-202ENST00000409326 APOBRQ0VD83 1088 aa23.61■■□□□ 1.37
PTCD3-202ENST00000409326 SLC35G1Q2M3R5 365 aa23.61■■□□□ 1.37
PTCD3-202ENST00000409326 RAB11FIP4Q86YS3 637 aa23.61■■□□□ 1.37
PTCD3-202ENST00000409326 FANCBQ8NB91 859 aa23.61■■□□□ 1.37
PTCD3-202ENST00000409326 MTMR8Q96EF0 704 aa23.61■■□□□ 1.37
PTCD3-202ENST00000409326 MMP19Q99542 508 aa23.61■■□□□ 1.37
PTCD3-202ENST00000409326 RNF146Q9NTX7 359 aa23.61■■□□□ 1.37
PTCD3-202ENST00000409326 CYTH3O43739 400 aa23.6■■□□□ 1.37
PTCD3-202ENST00000409326 XRCC5P13010 732 aaKnown RBP23.6■■□□□ 1.37
PTCD3-202ENST00000409326 ALAS1P13196 640 aa23.6■■□□□ 1.37
PTCD3-202ENST00000409326 CYP2B6P20813 491 aa23.6■■□□□ 1.37
PTCD3-202ENST00000409326 SMARCA1P28370 1054 aa23.6■■□□□ 1.37
PTCD3-202ENST00000409326 SLC9C1Q4G0N8 1177 aa23.6■■□□□ 1.37
PTCD3-202ENST00000409326 NBPF11Q86T75 865 aa23.6■■□□□ 1.37
PTCD3-202ENST00000409326 CCDC144CPQ8IYA2 1237 aa23.6■■□□□ 1.37
PTCD3-202ENST00000409326 SLAIN1Q8ND83 568 aa23.6■■□□□ 1.37
PTCD3-202ENST00000409326 PXYLP1Q8TE99 480 aa23.6■■□□□ 1.37
PTCD3-202ENST00000409326 TRERF1Q96PN7 1200 aa23.6■■□□□ 1.37
PTCD3-202ENST00000409326 APBA2Q99767 749 aa23.6■■□□□ 1.37
PTCD3-202ENST00000409326 LZTS2Q9BRK4 669 aa23.6■■□□□ 1.37
PTCD3-202ENST00000409326 ACAD9Q9H845 621 aa23.6■■□□□ 1.37
PTCD3-202ENST00000409326 VAT1LQ9HCJ6 419 aa23.6■■□□□ 1.37
PTCD3-202ENST00000409326 HOMER2Q9NSB8 354 aa23.6■■□□□ 1.37
PTCD3-202ENST00000409326 PDRG1Q9NUG6 133 aa23.6■■□□□ 1.37
PTCD3-202ENST00000409326 LCTP09848 1927 aa23.59■■□□□ 1.37
PTCD3-202ENST00000409326 ADCY3O60266 1144 aa23.59■■□□□ 1.37
PTCD3-202ENST00000409326 HOXC6P09630 235 aa23.59■■□□□ 1.37
PTCD3-202ENST00000409326 GRK4P32298 578 aa23.59■■□□□ 1.37
PTCD3-202ENST00000409326 EVCP57679 992 aa23.59■■□□□ 1.37
PTCD3-202ENST00000409326 TOB2Q14106 344 aaPredicted RBP23.59■■□□□ 1.37
PTCD3-202ENST00000409326 KCTD2Q14681 263 aa23.59■■□□□ 1.37
PTCD3-202ENST00000409326 QRICH1Q2TAL8 776 aa23.59■■□□□ 1.37
PTCD3-202ENST00000409326 SPZ1Q9BXG8 430 aa23.59■■□□□ 1.37
PTCD3-202ENST00000409326 RBM28Q9NW13 759 aaKnown RBP23.59■■□□□ 1.37
PTCD3-202ENST00000409326 NID2Q14112 1375 aa23.59■■□□□ 1.37
PTCD3-202ENST00000409326 PLEKHA8P1O95397 391 aa23.58■■□□□ 1.37
PTCD3-202ENST00000409326 TAL1P17542 331 aaPredicted RBP23.58■■□□□ 1.37
PTCD3-202ENST00000409326 RTN1Q16799 776 aa23.58■■□□□ 1.37
PTCD3-202ENST00000409326 ABHD8Q96I13 439 aa23.58■■□□□ 1.37
PTCD3-202ENST00000409326 C22orf23Q9BZE7 217 aa23.58■■□□□ 1.37
PTCD3-202ENST00000409326 UPF2Q9HAU5 1272 aaKnown RBP23.58■■□□□ 1.37
PTCD3-202ENST00000409326 GOLGA8AA7E2F4 631 aa23.57■■□□□ 1.36
PTCD3-202ENST00000409326 GOLGA8BA8MQT2 603 aa23.57■■□□□ 1.36
PTCD3-202ENST00000409326 ZBTB5O15062 677 aa23.57■■□□□ 1.36
PTCD3-202ENST00000409326 RBM25P49756 843 aaKnown RBP23.57■■□□□ 1.36
PTCD3-202ENST00000409326 TMTC3Q6ZXV5 915 aa23.57■■□□□ 1.36
PTCD3-202ENST00000409326 DPP9Q86TI2 863 aa23.57■■□□□ 1.36
PTCD3-202ENST00000409326 SRBD1Q8N5C6 995 aaKnown RBP23.57■■□□□ 1.36
PTCD3-202ENST00000409326 SH3TC2Q8TF17 1288 aa23.57■■□□□ 1.36
PTCD3-202ENST00000409326 ARMC5Q96C12 935 aa23.57■■□□□ 1.36
PTCD3-202ENST00000409326 NAP1L2Q9ULW6 460 aaPredicted RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms